RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 IL1F10Q8WWZ1 152 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 URB1-AS1Q96HZ7 61 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 ABHD14BQ96IU4 210 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 UQCC2Q9BRT2 126 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 NIPSNAP3BQ9BS92 247 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 ZNF436Q9C0F3 470 aaPredicted RBP3.63□□□□□ -1.83
CKAP4-203ENST00000553039 SRRQ9GZT4 340 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 TMEM138Q9NPI0 162 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 SLC2A9Q9NRM0 540 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 IL36GQ9NZH8 169 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 SMPXQ9UHP9 88 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 CELA1Q9UNI1 258 aa3.63□□□□□ -1.83
CKAP4-203ENST00000553039 PUS1Q9Y606 427 aaKnown RBP eCLIP3.63□□□□□ -1.83
CKAP4-203ENST00000553039 LRP1BQ9NZR2 4599 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 FAM25EA8MYX2 175 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 H0Y8G0 127 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 NDUFA4O00483 81 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 CLN5O75503 358 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 SCGNO76038 276 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 PTTG1O95997 202 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 IGLV2-23P01705 113 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 EIF4EP06730 217 aaKnown RBP3.62□□□□□ -1.83
CKAP4-203ENST00000553039 IL7P13232 177 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 RPA2P15927 270 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 HTR2CP28335 458 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 GNRHRP30968 328 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 DUTP33316 252 aaKnown RBP3.62□□□□□ -1.83
CKAP4-203ENST00000553039 ZNF93P35789 620 aaPredicted RBP3.62□□□□□ -1.83
CKAP4-203ENST00000553039 TAGLN2P37802 199 aaKnown RBP3.62□□□□□ -1.83
CKAP4-203ENST00000553039 EMP1P54849 157 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 CLDN12P56749 244 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 DEFB131AP59861 70 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 KRTAP10-1P60331 282 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 ERVFC1-1P60608 527 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 UBE2KP61086 200 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 CLINT1Q14677 625 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 RTL8BQ17RB0 113 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 TRIM16LQ309B1 348 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 TMEM69Q5SWH9 247 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 AWAT2Q6E213 333 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 SPSB3Q6PJ21 355 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 SSX9Q7RTT3 188 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 OR5H6Q8NGV6 325 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 FAM3DQ96BQ1 224 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 S100A16Q96FQ6 103 aaKnown RBP3.62□□□□□ -1.83
CKAP4-203ENST00000553039 AGMATQ9BSE5 352 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 ALKBH7Q9BT30 221 aaPredicted RBP3.62□□□□□ -1.83
CKAP4-203ENST00000553039 C20orf24Q9BUV8 137 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 RHBDL2Q9NX52 303 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 DNAH5Q8TE73 4624 aa3.62□□□□□ -1.83
CKAP4-203ENST00000553039 IGKV3-7A0A075B6H7 116 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 A0A0A6YYH2 397 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 TRAV2A0A0B4J234 112 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 IGHV3-35A0A0C4DH35 117 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 hDV102S1A0JD36 115 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 METTL21EPA6NDL7 271 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 A6NJ64 397 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 SRRM4A7MD48 611 aaKnown RBP3.61□□□□□ -1.83
CKAP4-203ENST00000553039 HLA-DQB1P01920 261 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 APOHP02749 345 aaPredicted RBP3.61□□□□□ -1.83
CKAP4-203ENST00000553039 CRYGCP07315 174 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 GIG44P09565 113 aaPredicted RBP3.61□□□□□ -1.83
CKAP4-203ENST00000553039 UBBP0CG47 229 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 CD37P11049 281 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 SERPINA2P20848 420 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 AMTP48728 403 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 MRPS10P82664 201 aaKnown RBP3.61□□□□□ -1.83
CKAP4-203ENST00000553039 IFITM3Q01628 133 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 ASAH1Q13510 395 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 P2RY14Q15391 338 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 C1orf100Q5SVJ3 147 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 C10orf25Q5T742 122 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 HACD4Q5VWC8 232 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 SNX29P2Q8IUI4 249 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.61□□□□□ -1.83
CKAP4-203ENST00000553039 CSNK1G2-AS1Q8NCQ2 148 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 TMEM190Q8WZ59 177 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 PTX4Q96A99 478 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 SLC25A38Q96DW6 304 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 RNF2Q99496 336 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 SDHCQ99643 169 aaPredicted RBP3.61□□□□□ -1.83
CKAP4-203ENST00000553039 TMEM70Q9BUB7 260 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 RHPN1-AS1Q9BWJ2 59 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 ATG5Q9H1Y0 275 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 RIMS4Q9H426 269 aaPredicted RBP3.61□□□□□ -1.83
CKAP4-203ENST00000553039 DIABLOQ9NR28 239 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 DNAH6Q9C0G6 4158 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 MYCBP2O75592 4640 aa3.61□□□□□ -1.83
CKAP4-203ENST00000553039 TRAV14DV4A0A0A6YYC5 116 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 TMEM272A0A1B0GTI8 110 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 RPS10-NUDT3A0A1W2PQS6 291 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 CENPXA8MT69 81 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 K7EQM0 130 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 M0R1X1 148 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 GSTZ1O43708 216 aaPredicted RBP3.6□□□□□ -1.83
CKAP4-203ENST00000553039 NUDT3O95989 172 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 P0C879 139 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 GPR183P32249 361 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 MAS1LP35410 378 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 HOXA1P49639 335 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms