RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 SPP1P10451 314 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 HTR2BP41595 481 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 DHODHQ02127 395 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 PSMG4Q5JS54 123 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 GPR107Q5VW38 600 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 MORN3Q6PF18 240 aaPredicted RBP8.31□□□□□ -1.08
NEK3-204ENST00000552973 Q6ZTC4 211 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 SELENOHQ8IZQ5 122 aaKnown RBP8.31□□□□□ -1.08
NEK3-204ENST00000552973 OR1S2Q8NGQ3 325 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 GLYATL2Q8WU03 294 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 RAB40CQ96S21 281 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 TMEM222Q9H0R3 208 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 MIXL1Q9H2W2 232 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 NAA60Q9H7X0 242 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 PRR13Q9NZ81 148 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 CACNG5Q9UF02 275 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 C14orf166Q9Y224 244 aaKnown RBP8.31□□□□□ -1.08
NEK3-204ENST00000552973 U3KQE9 123 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 KMT2AQ03164 3969 aa8.31□□□□□ -1.08
NEK3-204ENST00000552973 ZNF705EA8MWA4 302 aaPredicted RBP8.3□□□□□ -1.08
NEK3-204ENST00000552973 C11orf94C9JXX5 98 aa8.3□□□□□ -1.08
NEK3-204ENST00000552973 CTDSP2O14595 271 aa8.3□□□□□ -1.08
NEK3-204ENST00000552973 GABARAPO95166 117 aa8.3□□□□□ -1.08
NEK3-204ENST00000552973 HNRNPCP07910 306 aaKnown RBP eCLIP8.3□□□□□ -1.08
NEK3-204ENST00000552973 MIFP14174 115 aa8.3□□□□□ -1.08
NEK3-204ENST00000552973 TBPP20226 339 aa8.3□□□□□ -1.08
NEK3-204ENST00000552973 OR10J1P30954 320 aa8.3□□□□□ -1.08
NEK3-204ENST00000552973 USF2Q15853 346 aaPredicted RBP8.3□□□□□ -1.08
NEK3-204ENST00000552973 TMEM268Q5VZI3 342 aa8.3□□□□□ -1.08
NEK3-204ENST00000552973 C16orf54Q6UWD8 224 aa8.3□□□□□ -1.08
NEK3-204ENST00000552973 SLC24A4Q8NFF2 622 aa8.3□□□□□ -1.08
NEK3-204ENST00000552973 OR52E5Q8NH55 327 aa8.3□□□□□ -1.08
NEK3-204ENST00000552973 TMEM170AQ8WVE7 144 aa8.3□□□□□ -1.08
NEK3-204ENST00000552973 GLMPQ8WWB7 406 aa8.3□□□□□ -1.08
NEK3-204ENST00000552973 HRH4Q9H3N8 390 aa8.3□□□□□ -1.08
NEK3-204ENST00000552973 TBC1D24Q9ULP9 559 aa8.3□□□□□ -1.08
NEK3-204ENST00000552973 DNAH10Q8IVF4 4471 aa8.3□□□□□ -1.08
NEK3-204ENST00000552973 IGHV4-4A0A075B6R2 117 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 TRAV10A0A0B4J240 114 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 HELTA6NFD8 242 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 GABARAPH6UMI1 98 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 RGS5O15539 181 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 B3GALNT1O75752 331 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 IL4P05112 153 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 EIF2B2P49770 351 aaKnown RBP8.29□□□□□ -1.08
NEK3-204ENST00000552973 TCTAP57738 103 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 C2orf83Q53S99 150 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 TMEM41BQ5BJD5 291 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 GSG1LQ6UXU4 331 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 FAM219AQ8IW50 185 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 CENPSQ8N2Z9 138 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 CSNK1G2-AS1Q8NCQ2 148 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 NPIPB3Q92617 1050 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 RBPMSQ93062 196 aaKnown RBP8.29□□□□□ -1.08
NEK3-204ENST00000552973 ACY3Q96HD9 319 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 CELA1Q9UNI1 258 aa8.29□□□□□ -1.08
NEK3-204ENST00000552973 DISC1C4P0D8 188 aa8.28□□□□□ -1.08
NEK3-204ENST00000552973 SMIM18P0DKX4 95 aa8.28□□□□□ -1.08
NEK3-204ENST00000552973 SLC25A4P12235 298 aa8.28□□□□□ -1.08
NEK3-204ENST00000552973 AP2S1P53680 142 aaPredicted RBP8.28□□□□□ -1.08
NEK3-204ENST00000552973 DEFB1P60022 68 aa8.28□□□□□ -1.08
NEK3-204ENST00000552973 YPEL3P61236 119 aaPredicted RBP8.28□□□□□ -1.08
NEK3-204ENST00000552973 C12orf74Q32Q52 190 aa8.28□□□□□ -1.08
NEK3-204ENST00000552973 AARDQ4LEZ3 155 aa8.28□□□□□ -1.08
NEK3-204ENST00000552973 RNASEH2CQ8TDP1 164 aaKnown RBP8.28□□□□□ -1.08
NEK3-204ENST00000552973 C15orf40Q8WUR7 153 aa8.28□□□□□ -1.08
NEK3-204ENST00000552973 SCRT1Q9BWW7 348 aa8.28□□□□□ -1.08
NEK3-204ENST00000552973 XCL2Q9UBD3 114 aa8.28□□□□□ -1.08
NEK3-204ENST00000552973 GPR132Q9UNW8 380 aa8.28□□□□□ -1.08
NEK3-204ENST00000552973 CRYM-AS1A6NIL9 109 aa8.27□□□□□ -1.09
NEK3-204ENST00000552973 FAM90A26D6RGX4 464 aa8.27□□□□□ -1.09
NEK3-204ENST00000552973 BUB3O43684 328 aa8.27□□□□□ -1.09
NEK3-204ENST00000552973 IFNA10P01566 189 aa8.27□□□□□ -1.09
NEK3-204ENST00000552973 IGKV3-20P01619 116 aa8.27□□□□□ -1.09
NEK3-204ENST00000552973 RD3LP0DJH9 198 aa8.27□□□□□ -1.09
NEK3-204ENST00000552973 PSG1P11464 419 aa8.27□□□□□ -1.09
NEK3-204ENST00000552973 NPY1RP25929 384 aa8.27□□□□□ -1.09
NEK3-204ENST00000552973 FXYD7P58549 80 aa8.27□□□□□ -1.09
NEK3-204ENST00000552973 ETFRF1Q6IPR1 90 aa8.27□□□□□ -1.09
NEK3-204ENST00000552973 OR51S1Q8NGJ8 323 aa8.27□□□□□ -1.09
NEK3-204ENST00000552973 OR51G1Q8NGK1 321 aa8.27□□□□□ -1.09
NEK3-204ENST00000552973 OR4C16Q8NGL9 310 aa8.27□□□□□ -1.09
NEK3-204ENST00000552973 VPS13DQ5THJ4 4388 aa8.27□□□□□ -1.09
NEK3-204ENST00000552973 HERC2O95714 4834 aa8.27□□□□□ -1.09
NEK3-204ENST00000552973 FRAS1Q86XX4 4008 aa8.26□□□□□ -1.09
NEK3-204ENST00000552973 DEFB131BA0A096LNP1 70 aa8.26□□□□□ -1.09
NEK3-204ENST00000552973 H3BMM0 161 aa8.26□□□□□ -1.09
NEK3-204ENST00000552973 TOMM40O96008 361 aa8.26□□□□□ -1.09
NEK3-204ENST00000552973 AKAIN1P0CW23 69 aa8.26□□□□□ -1.09
NEK3-204ENST00000552973 SULT1A3P0DMM9 295 aa8.26□□□□□ -1.09
NEK3-204ENST00000552973 SULT1A4P0DMN0 295 aa8.26□□□□□ -1.09
NEK3-204ENST00000552973 SNRPD3P62318 126 aaKnown RBP8.26□□□□□ -1.09
NEK3-204ENST00000552973 IL18Q14116 193 aa8.26□□□□□ -1.09
NEK3-204ENST00000552973 SPCS2Q15005 226 aa8.26□□□□□ -1.09
NEK3-204ENST00000552973 GDF5OSQ5U4N7 250 aa8.26□□□□□ -1.09
NEK3-204ENST00000552973 SIGLEC15Q6ZMC9 328 aa8.26□□□□□ -1.09
NEK3-204ENST00000552973 DIRAS2Q96HU8 199 aa8.26□□□□□ -1.09
NEK3-204ENST00000552973 PBDC1Q9BVG4 233 aa8.26□□□□□ -1.09
NEK3-204ENST00000552973 NRN1Q9NPD7 142 aa8.26□□□□□ -1.09
NEK3-204ENST00000552973 TMEM56-RWDD3S4R434 201 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms