RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 ANXA2RQ3ZCQ2 193 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 SPRNQ5BIV9 151 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 CENPWQ5EE01 88 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 ETFRF1Q6IPR1 90 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 Q6ZS92 163 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 FAM231DQ6ZW35 169 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 TCF23Q7RTU1 214 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 PDPNQ86YL7 162 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 LINC00311Q8N616 119 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 SIGLECL1Q8N7X8 197 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 STXBP6Q8NFX7 210 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 TMEM167AQ8TBQ9 72 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 ZNF596Q8TC21 504 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 WIPF2Q8TF74 440 aaPredicted RBP4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 TMEM190Q8WZ59 177 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 LEAP2Q969E1 77 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 TMEM186Q96B77 213 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 FLYWCH2Q96CP2 140 aaKnown RBP4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 GRAMD2BQ96HH9 432 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 MIEN1Q9BRT3 115 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 HEATR1Q9H583 2144 aaKnown RBP4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 TRIOBPQ9H2D6 2365 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 TET2Q6N021 2002 aaPredicted RBP4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 WDR87Q6ZQQ6 2873 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 PSMB11A5LHX3 300 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 TCAPO15273 167 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 OR7C2O60412 319 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 SERF1AO75920 110 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 GPX1P07203 203 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 RNF224P0DH78 156 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 SAA1P0DJI8 122 aaPredicted RBP4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 SELLP14151 372 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 RAB4AP20338 218 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 HNF1AP20823 631 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 MC5RP33032 325 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 LGALS7P47929 136 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 GNG10P50151 68 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 RPL8P62917 257 aaKnown RBP4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 SRSF6Q13247 344 aaKnown RBP4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 TMEM183BQ1AE95 376 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 FAM201AQ5SY85 155 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 IBA57Q5T440 356 aaKnown RBP4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 FAM162BQ5T6X4 162 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 TMEM136Q6ZRR5 245 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 C19orf35Q6ZS72 473 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 ASCL5Q7RTU5 278 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 OR8I2Q8N0Y5 310 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 THAP8Q8NA92 274 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 DEFB124Q8NES8 71 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 DEFB108BQ8NET1 73 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 OR4C13Q8NGP0 309 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 FAM57AQ8TBR7 257 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 SMIM12Q96EX1 92 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 IGF2BP2-AS1Q96M15 143 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 HARBI1Q96MB7 349 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 RBM14Q96PK6 669 aaKnown RBP4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 HSPB9Q9BQS6 159 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 SAMD10Q9BYL1 202 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 ZNF430Q9H8G1 570 aaPredicted RBP4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 ZNF586Q9NXT0 402 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 NAT8BQ9UHF3 227 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 SH3BGRL2Q9UJC5 107 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 TP53TG3Q9ULZ0 132 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 FAM215AQ9Y5M1 114 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 CACNA1GO43497 2377 aa4.82□□□□□ -1.64
CHMP4A-210ENST00000552620 USP34Q70CQ2 3546 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 FAM186AA6NE01 2351 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 PPIAL4EA0A075B759 164 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 IGKV1OR2-108A0A075B7D4 117 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 TCRBV4S1A1TA0A5B7 111 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 GRIFINA4D1Z8 144 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 C17orf100A8MU93 164 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 GGTLC3B5MD39 225 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 TEX22C9J3V5 150 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 PPIAL4DF5H284 164 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 H0YJW9 148 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 TNFRSF13BO14836 293 aaPredicted RBP4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 COX7A2P2O60397 106 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 IGLV2-8P01709 118 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 SNRPCP09234 159 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 PPIAL4FP0DN26 164 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 MYOD1P15172 320 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 ARL3P36405 182 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 COMPP49747 757 aaPredicted RBP4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 PAX2Q02962 417 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 OR5I1Q13606 314 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 VMA21Q3ZAQ7 101 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 UTF1Q5T230 341 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 TPTE2P1Q5T6R2 138 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 C10orf113Q5VZT2 155 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 CYB5R2Q6BCY4 276 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 PVRIGQ6DKI7 326 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 TOMM20LQ6UXN7 152 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 TGIF2LXQ8IUE1 241 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 FAM216BQ8N7L0 139 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 ST6GALNAC3Q8NDV1 305 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 OR9G1Q8NH87 305 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 FAM167A-AS1Q96KT0 104 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 PAXXQ9BUH6 204 aa4.81□□□□□ -1.64
CHMP4A-210ENST00000552620 ZNF747Q9BV97 191 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms