RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 LY96Q9Y6Y9 160 aa11.15□□□□□ -0.62
RAB3IP-216ENST00000552199 GGTLC3B5MD39 225 aa11.14□□□□□ -0.63
RAB3IP-216ENST00000552199 GGCTO75223 188 aaKnown RBP11.14□□□□□ -0.63
RAB3IP-216ENST00000552199 CRYBB3P26998 211 aa11.14□□□□□ -0.63
RAB3IP-216ENST00000552199 UBE2L3P68036 154 aaKnown RBP11.14□□□□□ -0.63
RAB3IP-216ENST00000552199 C5orf64Q2M2E5 130 aa11.14□□□□□ -0.63
RAB3IP-216ENST00000552199 FBLN7Q53RD9 439 aa11.14□□□□□ -0.63
RAB3IP-216ENST00000552199 SFRP2Q96HF1 295 aa11.14□□□□□ -0.63
RAB3IP-216ENST00000552199 PAXXQ9BUH6 204 aa11.14□□□□□ -0.63
RAB3IP-216ENST00000552199 BPESC1Q9GZL8 116 aa11.14□□□□□ -0.63
RAB3IP-216ENST00000552199 MDFIC2A0A1B0GVS7 189 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 I3L2K1 104 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 PHOX2AO14813 284 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 HIST1H2BKO60814 126 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 HIST1H2BJP06899 126 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 HIST1H2BOP23527 126 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 HIST1H2BBP33778 126 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 HIST1H2BDP58876 126 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 HIST1H2BCP62807 126 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 SUMO1P63165 101 aaKnown RBP11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 FXYD3Q14802 87 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 HIST2H2BEQ16778 126 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 HIST1H2BHQ93079 126 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 HIST1H2BNQ99877 126 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 HIST1H2BMQ99879 126 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 OR51M1Q9H341 326 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 HELTA6NFD8 242 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 PYYP10082 97 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 ORM2P19652 201 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 HNF1AP20823 631 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 NDUFA6P56556 154 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 EBI3Q14213 229 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 KCNIP4Q6PIL6 250 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 LINC00305Q7Z4B0 112 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 OR1B1Q8NGR6 318 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 FRZBQ92765 325 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 PERPQ96FX8 193 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 IMMP2LQ96T52 175 aa11.13□□□□□ -0.63
RAB3IP-216ENST00000552199 A0A1W2PPQ1 181 aa11.12□□□□□ -0.63
RAB3IP-216ENST00000552199 K7EN84 100 aa11.12□□□□□ -0.63
RAB3IP-216ENST00000552199 TOX4O94842 621 aa11.12□□□□□ -0.63
RAB3IP-216ENST00000552199 TRGC1P0CF51 173 aa11.12□□□□□ -0.63
RAB3IP-216ENST00000552199 HOXA5P20719 270 aa11.12□□□□□ -0.63
RAB3IP-216ENST00000552199 CLEC12BQ2HXU8 276 aa11.12□□□□□ -0.63
RAB3IP-216ENST00000552199 Q8N6K4 173 aa11.12□□□□□ -0.63
RAB3IP-216ENST00000552199 GSX1Q9H4S2 264 aaPredicted RBP11.12□□□□□ -0.63
RAB3IP-216ENST00000552199 PPP5D1E7EU14 171 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 HYPMO75409 117 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 UBE2E1P51965 193 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 PLP1P60201 277 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 TEX38Q6PEX7 206 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 OR10G8Q8NGN5 311 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 OR1L6Q8NGR2 347 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 FXYD5Q96DB9 178 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 TBX15Q96SF7 602 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 TBL2Q9Y4P3 447 aaKnown RBP11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 IGSF10Q6WRI0 2623 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 ZNF98A6NK75 572 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 GOSR1O95249 250 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 IGHV4-39P01824 125 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 TYMSP04818 313 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 S100A8P05109 93 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 IGLC1P0CG04 106 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 GNG4P50150 75 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 PDLIM4P50479 330 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 FOXL1Q12952 345 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 ZNF562Q6V9R5 426 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 STXBP6Q8NFX7 210 aa11.11□□□□□ -0.63
RAB3IP-216ENST00000552199 K7EIM0 57 aa11.1□□□□□ -0.63
RAB3IP-216ENST00000552199 MEOX2P50222 304 aa11.1□□□□□ -0.63
RAB3IP-216ENST00000552199 FAM3BP58499 235 aaPredicted RBP11.1□□□□□ -0.63
RAB3IP-216ENST00000552199 CENPWQ5EE01 88 aa11.1□□□□□ -0.63
RAB3IP-216ENST00000552199 C12orf57Q99622 126 aa11.1□□□□□ -0.63
RAB3IP-216ENST00000552199 FAM103A1Q9BTL3 118 aaKnown RBP11.1□□□□□ -0.63
RAB3IP-216ENST00000552199 NCBP2LA6PVI3 153 aaKnown RBP11.09□□□□□ -0.63
RAB3IP-216ENST00000552199 CX3CL1P78423 397 aa11.09□□□□□ -0.63
RAB3IP-216ENST00000552199 AJUBAQ96IF1 538 aa11.09□□□□□ -0.63
RAB3IP-216ENST00000552199 EPG5Q9HCE0 2579 aa11.09□□□□□ -0.63
RAB3IP-216ENST00000552199 PSG1P11464 419 aa11.09□□□□□ -0.63
RAB3IP-216ENST00000552199 TMEM11P17152 192 aa11.09□□□□□ -0.63
RAB3IP-216ENST00000552199 CDX1P47902 265 aaPredicted RBP11.09□□□□□ -0.63
RAB3IP-216ENST00000552199 TIGITQ495A1 244 aa11.09□□□□□ -0.63
RAB3IP-216ENST00000552199 ASPHD1Q5U4P2 390 aa11.09□□□□□ -0.63
RAB3IP-216ENST00000552199 ZNF329Q86UD4 541 aa11.09□□□□□ -0.63
RAB3IP-216ENST00000552199 SGMS2Q8NHU3 365 aa11.09□□□□□ -0.63
RAB3IP-216ENST00000552199 BTF3L4Q96K17 158 aa11.09□□□□□ -0.63
RAB3IP-216ENST00000552199 WNK2Q9Y3S1 2297 aa11.08□□□□□ -0.64
RAB3IP-216ENST00000552199 NPIPB5A8MRT5 1133 aa11.08□□□□□ -0.64
RAB3IP-216ENST00000552199 ARPC1AQ92747 370 aa11.08□□□□□ -0.64
RAB3IP-216ENST00000552199 RASL11BQ9BPW5 248 aa11.08□□□□□ -0.64
RAB3IP-216ENST00000552199 TCEAL7Q9BRU2 100 aa11.08□□□□□ -0.64
RAB3IP-216ENST00000552199 IGKV1-17P01599 117 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 TAS2R60P59551 318 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 OR5I1Q13606 314 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 IGF2BP2-AS1Q96M15 143 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 RBM14Q96PK6 669 aaKnown RBP11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 LPAR2Q9HBW0 351 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 HIGD1AQ9Y241 93 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 POLR3KQ9Y2Y1 108 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms