RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 EDA2RQ9HAV5 297 aa14.14□□□□□ -0.15
DDX54-208ENST00000551344 IGHV3OR16-13A0A075B7E8 117 aa14.13□□□□□ -0.15
DDX54-208ENST00000551344 IGHV3-74A0A0B4J1X5 117 aa14.13□□□□□ -0.15
DDX54-208ENST00000551344 IGLC1P0CG04 106 aa14.13□□□□□ -0.15
DDX54-208ENST00000551344 IL7P13232 177 aa14.13□□□□□ -0.15
DDX54-208ENST00000551344 YPEL3P61236 119 aaPredicted RBP14.13□□□□□ -0.15
DDX54-208ENST00000551344 TIGITQ495A1 244 aa14.13□□□□□ -0.15
DDX54-208ENST00000551344 TCF24Q7RTU0 167 aa14.13□□□□□ -0.15
DDX54-208ENST00000551344 Q8WTZ3 238 aa14.13□□□□□ -0.15
DDX54-208ENST00000551344 ST8SIA2Q92186 375 aa14.13□□□□□ -0.15
DDX54-208ENST00000551344 METTL26Q96S19 204 aa14.13□□□□□ -0.15
DDX54-208ENST00000551344 UBQLN2Q9UHD9 624 aa14.13□□□□□ -0.15
DDX54-208ENST00000551344 NBEAL2Q6ZNJ1 2754 aa14.13□□□□□ -0.15
DDX54-208ENST00000551344 LINC00854A0A1B0GVQ3 168 aa14.12□□□□□ -0.15
DDX54-208ENST00000551344 C9orf170A2RU37 121 aa14.12□□□□□ -0.15
DDX54-208ENST00000551344 MED6O75586 246 aa14.12□□□□□ -0.15
DDX54-208ENST00000551344 APOHP02749 345 aaPredicted RBP14.12□□□□□ -0.15
DDX54-208ENST00000551344 IFNA4P05014 189 aa14.12□□□□□ -0.15
DDX54-208ENST00000551344 CRYBB3P26998 211 aa14.12□□□□□ -0.15
DDX54-208ENST00000551344 OR10J1P30954 320 aa14.12□□□□□ -0.15
DDX54-208ENST00000551344 CNPY1Q3B7I2 92 aa14.12□□□□□ -0.15
DDX54-208ENST00000551344 ODF3L2Q3SX64 289 aa14.12□□□□□ -0.15
DDX54-208ENST00000551344 LILRB2Q8N423 598 aa14.12□□□□□ -0.15
DDX54-208ENST00000551344 NPIPB3Q92617 1050 aa14.12□□□□□ -0.15
DDX54-208ENST00000551344 HOXB5P09067 269 aa14.11□□□□□ -0.15
DDX54-208ENST00000551344 GPX4P36969 197 aaPredicted RBP14.11□□□□□ -0.15
DDX54-208ENST00000551344 IGKV3-7A0A075B6H7 116 aa14.1□□□□□ -0.15
DDX54-208ENST00000551344 DFFBO76075 338 aa14.1□□□□□ -0.15
DDX54-208ENST00000551344 GGNBP1Q5YKI7 109 aa14.1□□□□□ -0.15
DDX54-208ENST00000551344 LINC00299Q6ZSB3 139 aa14.1□□□□□ -0.15
DDX54-208ENST00000551344 ACY3Q96HD9 319 aa14.1□□□□□ -0.15
DDX54-208ENST00000551344 NARS2Q96I59 477 aaKnown RBP14.1□□□□□ -0.15
DDX54-208ENST00000551344 CIB3Q96Q77 187 aaPredicted RBP14.1□□□□□ -0.15
DDX54-208ENST00000551344 RETNQ9HD89 108 aa14.1□□□□□ -0.15
DDX54-208ENST00000551344 FLVCR2Q9UPI3 526 aa14.1□□□□□ -0.15
DDX54-208ENST00000551344 TRAV2A0A0B4J234 112 aa14.09□□□□□ -0.15
DDX54-208ENST00000551344 IGHV3-66A0A0C4DH42 116 aa14.09□□□□□ -0.15
DDX54-208ENST00000551344 OR4E1P0C645 316 aa14.09□□□□□ -0.15
DDX54-208ENST00000551344 LYL1P12980 280 aa14.09□□□□□ -0.15
DDX54-208ENST00000551344 BTCP35070 178 aa14.09□□□□□ -0.15
DDX54-208ENST00000551344 TFPI2P48307 235 aa14.09□□□□□ -0.15
DDX54-208ENST00000551344 APOC4P55056 127 aa14.09□□□□□ -0.15
DDX54-208ENST00000551344 RAB11AP62491 216 aa14.09□□□□□ -0.15
DDX54-208ENST00000551344 RPP30P78346 268 aaKnown RBP14.09□□□□□ -0.15
DDX54-208ENST00000551344 DHRS2Q13268 280 aa14.09□□□□□ -0.15
DDX54-208ENST00000551344 GBGT1Q8N5D6 347 aa14.09□□□□□ -0.15
DDX54-208ENST00000551344 COQ8AQ8NI60 647 aa14.09□□□□□ -0.15
DDX54-208ENST00000551344 KIR2DL5BA0A0G2JN68 375 aa14.08□□□□□ -0.16
DDX54-208ENST00000551344 KIR2DL5BA0A0G2JPC4 375 aa14.08□□□□□ -0.16
DDX54-208ENST00000551344 DNASE2O00115 360 aaPredicted RBP14.08□□□□□ -0.16
DDX54-208ENST00000551344 UBE2CO00762 179 aa14.08□□□□□ -0.16
DDX54-208ENST00000551344 SYNGR2O43760 224 aa14.08□□□□□ -0.16
DDX54-208ENST00000551344 RD3LP0DJH9 198 aa14.08□□□□□ -0.16
DDX54-208ENST00000551344 RPL11P62913 178 aaKnown RBP14.08□□□□□ -0.16
DDX54-208ENST00000551344 CASC10Q5T4H9 136 aa14.08□□□□□ -0.16
DDX54-208ENST00000551344 LYG2Q86SG7 212 aa14.08□□□□□ -0.16
DDX54-208ENST00000551344 KIR2DL5AQ8N109 375 aa14.08□□□□□ -0.16
DDX54-208ENST00000551344 KIR2DL5BQ8NHK3 375 aa14.08□□□□□ -0.16
DDX54-208ENST00000551344 GRAMD2BQ96HH9 432 aa14.08□□□□□ -0.16
DDX54-208ENST00000551344 MS4A6AQ9H2W1 248 aa14.08□□□□□ -0.16
DDX54-208ENST00000551344 U3KQE9 123 aa14.08□□□□□ -0.16
DDX54-208ENST00000551344 PLA2G10O15496 165 aa14.07□□□□□ -0.16
DDX54-208ENST00000551344 TOMM40O96008 361 aa14.07□□□□□ -0.16
DDX54-208ENST00000551344 IFNA21P01568 189 aa14.07□□□□□ -0.16
DDX54-208ENST00000551344 IAPPP10997 89 aa14.07□□□□□ -0.16
DDX54-208ENST00000551344 GAMTQ14353 236 aa14.07□□□□□ -0.16
DDX54-208ENST00000551344 Q6ZWC4 215 aa14.07□□□□□ -0.16
DDX54-208ENST00000551344 HNRNPCP07910 306 aaKnown RBP eCLIP14.06□□□□□ -0.16
DDX54-208ENST00000551344 ANXA7P20073 488 aaKnown RBP14.06□□□□□ -0.16
DDX54-208ENST00000551344 P2RY1P47900 373 aa14.06□□□□□ -0.16
DDX54-208ENST00000551344 ID3Q02535 119 aa14.06□□□□□ -0.16
DDX54-208ENST00000551344 C4orf46Q504U0 113 aa14.06□□□□□ -0.16
DDX54-208ENST00000551344 WFDC3Q8IUB2 231 aa14.06□□□□□ -0.16
DDX54-208ENST00000551344 APRG1Q8IVJ8 170 aa14.06□□□□□ -0.16
DDX54-208ENST00000551344 SLC35E1Q96K37 410 aa14.06□□□□□ -0.16
DDX54-208ENST00000551344 OVOL2Q9BRP0 275 aa14.06□□□□□ -0.16
DDX54-208ENST00000551344 CCDC32Q9BV29 185 aa14.06□□□□□ -0.16
DDX54-208ENST00000551344 WRBO00258 174 aa14.05□□□□□ -0.16
DDX54-208ENST00000551344 LYRM1O43325 122 aa14.05□□□□□ -0.16
DDX54-208ENST00000551344 ADAP1O75689 374 aa14.05□□□□□ -0.16
DDX54-208ENST00000551344 IL4P05112 153 aa14.05□□□□□ -0.16
DDX54-208ENST00000551344 PSG1P11464 419 aa14.05□□□□□ -0.16
DDX54-208ENST00000551344 EIF2B2P49770 351 aaKnown RBP14.05□□□□□ -0.16
DDX54-208ENST00000551344 AP2S1P53680 142 aaPredicted RBP14.05□□□□□ -0.16
DDX54-208ENST00000551344 STPG3Q8N7X2 389 aa14.05□□□□□ -0.16
DDX54-208ENST00000551344 MAGT1Q9H0U3 335 aa14.05□□□□□ -0.16
DDX54-208ENST00000551344 MAP6D1Q9H9H5 199 aa14.05□□□□□ -0.16
DDX54-208ENST00000551344 TP53TG1Q9Y2A0 90 aa14.05□□□□□ -0.16
DDX54-208ENST00000551344 HELTA6NFD8 242 aa14.04□□□□□ -0.16
DDX54-208ENST00000551344 ZFP92A6NM28 416 aa14.04□□□□□ -0.16
DDX54-208ENST00000551344 USF2Q15853 346 aaPredicted RBP14.04□□□□□ -0.16
DDX54-208ENST00000551344 C16orf54Q6UWD8 224 aa14.04□□□□□ -0.16
DDX54-208ENST00000551344 OR51G1Q8NGK1 321 aa14.04□□□□□ -0.16
DDX54-208ENST00000551344 IL17DQ8TAD2 202 aa14.04□□□□□ -0.16
DDX54-208ENST00000551344 RABAC1Q9UI14 185 aa14.04□□□□□ -0.16
DDX54-208ENST00000551344 PAIP2BQ9ULR5 123 aaKnown RBP14.04□□□□□ -0.16
DDX54-208ENST00000551344 FABP1P07148 127 aa14.03□□□□□ -0.16
DDX54-208ENST00000551344 RPL35AP18077 110 aaKnown RBP14.03□□□□□ -0.16
DDX54-208ENST00000551344 MITD1Q8WV92 249 aa14.03□□□□□ -0.16
DDX54-208ENST00000551344 S100ZQ8WXG8 99 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms