RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 RAB40CQ96S21 281 aa15.67■□□□□ 0.1
SMARCC2-210ENST00000550519 TMEM222Q9H0R3 208 aa15.67■□□□□ 0.1
SMARCC2-210ENST00000550519 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.67■□□□□ 0.1
SMARCC2-210ENST00000550519 CLEC5AQ9NY25 188 aa15.67■□□□□ 0.1
SMARCC2-210ENST00000550519 TBC1D24Q9ULP9 559 aa15.67■□□□□ 0.1
SMARCC2-210ENST00000550519 IGHV4-4A0A075B6R2 117 aa15.66■□□□□ 0.1
SMARCC2-210ENST00000550519 HNRNPCP07910 306 aaKnown RBP eCLIP15.66■□□□□ 0.1
SMARCC2-210ENST00000550519 YPEL3P61236 119 aaPredicted RBP15.66■□□□□ 0.1
SMARCC2-210ENST00000550519 DHRS2Q13268 280 aa15.66■□□□□ 0.1
SMARCC2-210ENST00000550519 C2orf83Q53S99 150 aa15.66■□□□□ 0.1
SMARCC2-210ENST00000550519 PRSS54Q6PEW0 395 aa15.66■□□□□ 0.1
SMARCC2-210ENST00000550519 OR1S2Q8NGQ3 325 aa15.66■□□□□ 0.1
SMARCC2-210ENST00000550519 Q8WTZ3 238 aa15.66■□□□□ 0.1
SMARCC2-210ENST00000550519 EXTL2Q9UBQ6 330 aa15.66■□□□□ 0.1
SMARCC2-210ENST00000550519 RAB3DO95716 219 aa15.65■□□□□ 0.1
SMARCC2-210ENST00000550519 SLC25A4P12235 298 aa15.65■□□□□ 0.1
SMARCC2-210ENST00000550519 RND2P52198 227 aa15.65■□□□□ 0.1
SMARCC2-210ENST00000550519 AP2S1P53680 142 aaPredicted RBP15.65■□□□□ 0.1
SMARCC2-210ENST00000550519 DHODHQ02127 395 aa15.65■□□□□ 0.1
SMARCC2-210ENST00000550519 SCGB2B2Q4G0G5 96 aa15.65■□□□□ 0.1
SMARCC2-210ENST00000550519 PSMG4Q5JS54 123 aa15.65■□□□□ 0.1
SMARCC2-210ENST00000550519 LHFPL5Q8TAF8 219 aa15.65■□□□□ 0.1
SMARCC2-210ENST00000550519 RNASEH2CQ8TDP1 164 aaKnown RBP15.65■□□□□ 0.1
SMARCC2-210ENST00000550519 GLYATL2Q8WU03 294 aa15.65■□□□□ 0.1
SMARCC2-210ENST00000550519 AP3S1Q92572 193 aa15.65■□□□□ 0.1
SMARCC2-210ENST00000550519 RNF126Q9BV68 326 aa15.65■□□□□ 0.1
SMARCC2-210ENST00000550519 PCLOQ9Y6V0 5065 aa15.64■□□□□ 0.09
SMARCC2-210ENST00000550519 OR5AC1P0C628 307 aa15.64■□□□□ 0.09
SMARCC2-210ENST00000550519 ZNF182P17025 639 aaPredicted RBP15.64■□□□□ 0.09
SMARCC2-210ENST00000550519 OR10J1P30954 320 aa15.64■□□□□ 0.09
SMARCC2-210ENST00000550519 TAS2R19P59542 299 aa15.64■□□□□ 0.09
SMARCC2-210ENST00000550519 STEAP1BQ6NZ63 245 aa15.64■□□□□ 0.09
SMARCC2-210ENST00000550519 CENPSQ8N2Z9 138 aa15.64■□□□□ 0.09
SMARCC2-210ENST00000550519 C15orf40Q8WUR7 153 aa15.64■□□□□ 0.09
SMARCC2-210ENST00000550519 RBPMSQ93062 196 aaKnown RBP15.64■□□□□ 0.09
SMARCC2-210ENST00000550519 RTBDNQ9BSG5 229 aaPredicted RBP15.64■□□□□ 0.09
SMARCC2-210ENST00000550519 HEYLQ9NQ87 328 aaPredicted RBP15.64■□□□□ 0.09
SMARCC2-210ENST00000550519 CELA1Q9UNI1 258 aa15.64■□□□□ 0.09
SMARCC2-210ENST00000550519 TEX13DA0A0J9YY54 714 aaPredicted RBP15.63■□□□□ 0.09
SMARCC2-210ENST00000550519 USF2Q15853 346 aaPredicted RBP15.63■□□□□ 0.09
SMARCC2-210ENST00000550519 TMEM170AQ8WVE7 144 aa15.63■□□□□ 0.09
SMARCC2-210ENST00000550519 NAA50Q9GZZ1 169 aaKnown RBP15.63■□□□□ 0.09
SMARCC2-210ENST00000550519 SEPSECSQ9HD40 501 aaKnown RBP15.63■□□□□ 0.09
SMARCC2-210ENST00000550519 FAM90A26D6RGX4 464 aa15.62■□□□□ 0.09
SMARCC2-210ENST00000550519 CTF1Q16619 201 aa15.62■□□□□ 0.09
SMARCC2-210ENST00000550519 C12orf74Q32Q52 190 aa15.62■□□□□ 0.09
SMARCC2-210ENST00000550519 SELENOHQ8IZQ5 122 aaKnown RBP15.62■□□□□ 0.09
SMARCC2-210ENST00000550519 SLC24A4Q8NFF2 622 aa15.62■□□□□ 0.09
SMARCC2-210ENST00000550519 GPR146Q96CH1 333 aa15.62■□□□□ 0.09
SMARCC2-210ENST00000550519 NAA60Q9H7X0 242 aa15.62■□□□□ 0.09
SMARCC2-210ENST00000550519 CACNG5Q9UF02 275 aa15.62■□□□□ 0.09
SMARCC2-210ENST00000550519 NXPH3O95157 252 aa15.61■□□□□ 0.09
SMARCC2-210ENST00000550519 GABARAPO95166 117 aa15.61■□□□□ 0.09
SMARCC2-210ENST00000550519 AMBPP02760 352 aa15.61■□□□□ 0.09
SMARCC2-210ENST00000550519 IL4P05112 153 aa15.61■□□□□ 0.09
SMARCC2-210ENST00000550519 C1QTNF4Q9BXJ3 329 aa15.61■□□□□ 0.09
SMARCC2-210ENST00000550519 NRN1Q9NPD7 142 aa15.61■□□□□ 0.09
SMARCC2-210ENST00000550519 C14orf166Q9Y224 244 aaKnown RBP15.61■□□□□ 0.09
SMARCC2-210ENST00000550519 DEFB131BA0A096LNP1 70 aa15.6■□□□□ 0.09
SMARCC2-210ENST00000550519 H3BMM0 161 aa15.6■□□□□ 0.09
SMARCC2-210ENST00000550519 GABARAPH6UMI1 98 aa15.6■□□□□ 0.09
SMARCC2-210ENST00000550519 BUB3O43684 328 aa15.6■□□□□ 0.09
SMARCC2-210ENST00000550519 NUTF2P61970 127 aaKnown RBP15.6■□□□□ 0.09
SMARCC2-210ENST00000550519 SNRPD3P62318 126 aaKnown RBP15.6■□□□□ 0.09
SMARCC2-210ENST00000550519 SSBP1Q04837 148 aaKnown RBP15.6■□□□□ 0.09
SMARCC2-210ENST00000550519 SURF2Q15527 256 aaPredicted RBP15.6■□□□□ 0.09
SMARCC2-210ENST00000550519 ETFRF1Q6IPR1 90 aa15.6■□□□□ 0.09
SMARCC2-210ENST00000550519 FAAP20Q6NZ36 180 aa15.6■□□□□ 0.09
SMARCC2-210ENST00000550519 LINC00336Q6ZUF6 198 aa15.6■□□□□ 0.09
SMARCC2-210ENST00000550519 NPIPB3Q92617 1050 aa15.6■□□□□ 0.09
SMARCC2-210ENST00000550519 CEBPZOSA8MTT3 80 aa15.59■□□□□ 0.09
SMARCC2-210ENST00000550519 TOMM40O96008 361 aa15.59■□□□□ 0.09
SMARCC2-210ENST00000550519 MEF2DQ14814 521 aa15.59■□□□□ 0.09
SMARCC2-210ENST00000550519 GPR107Q5VW38 600 aa15.59■□□□□ 0.09
SMARCC2-210ENST00000550519 ZNF767PQ75MW2 155 aa15.59■□□□□ 0.09
SMARCC2-210ENST00000550519 MIXL1Q9H2W2 232 aa15.59■□□□□ 0.09
SMARCC2-210ENST00000550519 XCL2Q9UBD3 114 aa15.59■□□□□ 0.09
SMARCC2-210ENST00000550519 CRYM-AS1A6NIL9 109 aa15.58■□□□□ 0.08
SMARCC2-210ENST00000550519 GSTZ1O43708 216 aaPredicted RBP15.58■□□□□ 0.08
SMARCC2-210ENST00000550519 RD3LP0DJH9 198 aa15.58■□□□□ 0.08
SMARCC2-210ENST00000550519 NPY1RP25929 384 aa15.58■□□□□ 0.08
SMARCC2-210ENST00000550519 TMEM268Q5VZI3 342 aa15.58■□□□□ 0.08
SMARCC2-210ENST00000550519 SIGLEC15Q6ZMC9 328 aa15.58■□□□□ 0.08
SMARCC2-210ENST00000550519 GPR132Q9UNW8 380 aa15.58■□□□□ 0.08
SMARCC2-210ENST00000550519 TMEM56-RWDD3S4R434 201 aa15.58■□□□□ 0.08
SMARCC2-210ENST00000550519 FAT2Q9NYQ8 4349 aa15.58■□□□□ 0.08
SMARCC2-210ENST00000550519 MRPS10P82664 201 aaKnown RBP15.57■□□□□ 0.08
SMARCC2-210ENST00000550519 NMSQ5H8A3 153 aa15.57■□□□□ 0.08
SMARCC2-210ENST00000550519 NOXA1Q86UR1 476 aa15.57■□□□□ 0.08
SMARCC2-210ENST00000550519 POM121L12Q8N7R1 296 aa15.57■□□□□ 0.08
SMARCC2-210ENST00000550519 ACY3Q96HD9 319 aa15.57■□□□□ 0.08
SMARCC2-210ENST00000550519 CACFD1Q9UGQ2 172 aa15.57■□□□□ 0.08
SMARCC2-210ENST00000550519 A0A1B0GVY2 172 aa15.56■□□□□ 0.08
SMARCC2-210ENST00000550519 DISC1C4P0D8 188 aa15.56■□□□□ 0.08
SMARCC2-210ENST00000550519 PSG1P11464 419 aa15.56■□□□□ 0.08
SMARCC2-210ENST00000550519 HLA-DRB4P13762 266 aa15.56■□□□□ 0.08
SMARCC2-210ENST00000550519 NKX2-1P43699 371 aaPredicted RBP15.56■□□□□ 0.08
SMARCC2-210ENST00000550519 ZNF705AQ6ZN79 300 aaPredicted RBP15.56■□□□□ 0.08
SMARCC2-210ENST00000550519 NEU1Q99519 415 aa15.56■□□□□ 0.08
SMARCC2-210ENST00000550519 SCRT1Q9BWW7 348 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms