RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 SRPXP78539 464 aa8.01□□□□□ -1.13
VTI1BP3-201ENST00000550220 OR51S1Q8NGJ8 323 aa8.01□□□□□ -1.13
VTI1BP3-201ENST00000550220 DYNC2LI1Q8TCX1 351 aa8.01□□□□□ -1.13
VTI1BP3-201ENST00000550220 GPR146Q96CH1 333 aa8.01□□□□□ -1.13
VTI1BP3-201ENST00000550220 FNDC4Q9H6D8 234 aaPredicted RBP8.01□□□□□ -1.13
VTI1BP3-201ENST00000550220 PFDN2Q9UHV9 154 aa8.01□□□□□ -1.13
VTI1BP3-201ENST00000550220 RABAC1Q9UI14 185 aa8.01□□□□□ -1.13
VTI1BP3-201ENST00000550220 A0A0B4J2A0 478 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 FABP12A6NFH5 140 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 IGKV1-17P01599 117 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 APOHP02749 345 aaPredicted RBP8□□□□□ -1.13
VTI1BP3-201ENST00000550220 FAUP35544 74 aaKnown RBP8□□□□□ -1.13
VTI1BP3-201ENST00000550220 P2RY1P47900 373 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 CCR6P51684 374 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 AP3S2P59780 193 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 DEFB131AP59861 70 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 PMS2P11Q13670 270 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 TMEM187Q14656 261 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 MLANAQ16655 118 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 NMSQ5H8A3 153 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 FAAP20Q6NZ36 180 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 PRSS54Q6PEW0 395 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 MORN3Q6PF18 240 aaPredicted RBP8□□□□□ -1.13
VTI1BP3-201ENST00000550220 STHQ8IWL8 128 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 LILRB2Q8N423 598 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 OR11H2Q8NH07 326 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 MCUBQ9NWR8 336 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 SHPKQ9UHJ6 478 aa8□□□□□ -1.13
VTI1BP3-201ENST00000550220 IGHV3-66A0A0C4DH42 116 aa7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 CA1P00915 261 aaPredicted RBP7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 IFNA4P05014 189 aa7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 HNRNPCP07910 306 aaKnown RBP eCLIP7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 IGLC1P0CG04 106 aa7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 NPY1RP25929 384 aa7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 OR10J1P30954 320 aa7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 NUP62P37198 522 aaPredicted RBP7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 TIGITQ495A1 244 aa7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 LGI3Q8N145 548 aa7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 STXBP6Q8NFX7 210 aa7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 LHFPL5Q8TAF8 219 aa7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 C11orf45Q8TAV5 145 aa7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 DEDD2Q8WXF8 326 aa7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 LINC00476Q8WZB0 136 aa7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 C11orf68Q9H3H3 251 aaKnown RBP7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 SEPSECSQ9HD40 501 aaKnown RBP7.99□□□□□ -1.13
VTI1BP3-201ENST00000550220 DUXBA0A1W2PPF3 345 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 K7EQG2 157 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 LY6G6CO95867 125 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 IFNA10P01566 189 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 FABP1P07148 127 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 RD3LP0DJH9 198 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 SPP1P10451 314 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 AKR1C4P17516 323 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 TNFSF8P32971 234 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 RND2P52198 227 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 TCTAP57738 103 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 SMCO1Q147U7 214 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 ZNF124Q15973 351 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 LEMD1Q68G75 181 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 MCFD2Q8NI22 146 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 PHLDA1Q8WV24 401 aaPredicted RBP7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 SOSTQ9BQB4 213 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 SLIRPQ9GZT3 109 aaKnown RBP7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 MRPL36Q9P0J6 103 aaKnown RBP7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 HSPB7Q9UBY9 170 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 U3KQE9 123 aa7.98□□□□□ -1.13
VTI1BP3-201ENST00000550220 TOMM40O96008 361 aa7.97□□□□□ -1.13
VTI1BP3-201ENST00000550220 GPX4P36969 197 aaPredicted RBP7.97□□□□□ -1.13
VTI1BP3-201ENST00000550220 NUTF2P61970 127 aaKnown RBP7.97□□□□□ -1.13
VTI1BP3-201ENST00000550220 SNRPD3P62318 126 aaKnown RBP7.97□□□□□ -1.13
VTI1BP3-201ENST00000550220 DHRS2Q13268 280 aa7.97□□□□□ -1.13
VTI1BP3-201ENST00000550220 RBMS2Q15434 407 aaKnown RBP7.97□□□□□ -1.13
VTI1BP3-201ENST00000550220 C16orf54Q6UWD8 224 aa7.97□□□□□ -1.13
VTI1BP3-201ENST00000550220 CENPSQ8N2Z9 138 aa7.97□□□□□ -1.13
VTI1BP3-201ENST00000550220 DTD1Q8TEA8 209 aa7.97□□□□□ -1.13
VTI1BP3-201ENST00000550220 NPIPB3Q92617 1050 aa7.97□□□□□ -1.13
VTI1BP3-201ENST00000550220 H3BMQ9 156 aa7.96□□□□□ -1.14
VTI1BP3-201ENST00000550220 IL4P05112 153 aa7.96□□□□□ -1.14
VTI1BP3-201ENST00000550220 S100A5P33763 92 aa7.96□□□□□ -1.14
VTI1BP3-201ENST00000550220 RPP30P78346 268 aaKnown RBP7.96□□□□□ -1.14
VTI1BP3-201ENST00000550220 EWSR1Q01844 656 aaKnown RBP eCLIP7.96□□□□□ -1.14
VTI1BP3-201ENST00000550220 KLF9Q13886 244 aaPredicted RBP7.96□□□□□ -1.14
VTI1BP3-201ENST00000550220 TMEM128Q5BJH2 165 aa7.96□□□□□ -1.14
VTI1BP3-201ENST00000550220 TRPT1Q86TN4 253 aaKnown RBP7.96□□□□□ -1.14
VTI1BP3-201ENST00000550220 TOMM5Q8N4H5 51 aa7.96□□□□□ -1.14
VTI1BP3-201ENST00000550220 DCANP1Q8TF63 244 aa7.96□□□□□ -1.14
VTI1BP3-201ENST00000550220 SLC25A21Q9BQT8 299 aaPredicted RBP7.96□□□□□ -1.14
VTI1BP3-201ENST00000550220 HRH4Q9H3N8 390 aa7.96□□□□□ -1.14
VTI1BP3-201ENST00000550220 C11orf94C9JXX5 98 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 BUB3O43684 328 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 MED6O75586 246 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 ZNF688P0C7X2 276 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 SLC25A6P12236 298 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 MIFP14174 115 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 RAB11AP62491 216 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 PYDC2Q56P42 97 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 LGALS9CQ6DKI2 356 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 OR8G2PQ6IF36 304 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 LYZL2Q7Z4W2 148 aa7.95□□□□□ -1.14
VTI1BP3-201ENST00000550220 FAM24BQ8N5W8 94 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms