RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 PVALBP20472 110 aaPredicted RBP9.98□□□□□ -0.81
CDX2-202ENST00000548877 S100A10P60903 97 aa9.98□□□□□ -0.81
CDX2-202ENST00000548877 EIF5AP63241 154 aaKnown RBP9.98□□□□□ -0.81
CDX2-202ENST00000548877 C10orf55Q5SWW7 151 aa9.98□□□□□ -0.81
CDX2-202ENST00000548877 CLEC19AQ6UXS0 136 aa9.98□□□□□ -0.81
CDX2-202ENST00000548877 RBPMS2Q6ZRY4 209 aaKnown RBP9.98□□□□□ -0.81
CDX2-202ENST00000548877 LYZL2Q7Z4W2 148 aa9.98□□□□□ -0.81
CDX2-202ENST00000548877 SELENOHQ8IZQ5 122 aaKnown RBP9.98□□□□□ -0.81
CDX2-202ENST00000548877 SLC35G3Q8N808 338 aa9.98□□□□□ -0.81
CDX2-202ENST00000548877 LSM10Q969L4 123 aaKnown RBP9.98□□□□□ -0.81
CDX2-202ENST00000548877 MAP6D1Q9H9H5 199 aa9.98□□□□□ -0.81
CDX2-202ENST00000548877 PLEKHA2Q9HB19 425 aa9.98□□□□□ -0.81
CDX2-202ENST00000548877 PRR13Q9NZ81 148 aa9.98□□□□□ -0.81
CDX2-202ENST00000548877 NSG2Q9Y328 171 aa9.98□□□□□ -0.81
CDX2-202ENST00000548877 A0A1B0GU03 582 aa9.97□□□□□ -0.81
CDX2-202ENST00000548877 TAAR5O14804 337 aa9.97□□□□□ -0.81
CDX2-202ENST00000548877 BCL2L11O43521 198 aa9.97□□□□□ -0.81
CDX2-202ENST00000548877 RAB14P61106 215 aa9.97□□□□□ -0.81
CDX2-202ENST00000548877 RAB32Q13637 225 aa9.97□□□□□ -0.81
CDX2-202ENST00000548877 ODF3L2Q3SX64 289 aa9.97□□□□□ -0.81
CDX2-202ENST00000548877 UNQ9165/PRO28630Q6UXU0 137 aa9.97□□□□□ -0.81
CDX2-202ENST00000548877 FAM219AQ8IW50 185 aa9.97□□□□□ -0.81
CDX2-202ENST00000548877 ZNF680Q8NEM1 530 aa9.97□□□□□ -0.81
CDX2-202ENST00000548877 OR51H1Q8NH63 302 aa9.97□□□□□ -0.81
CDX2-202ENST00000548877 RNASE11Q8TAA1 199 aaKnown RBP9.97□□□□□ -0.81
CDX2-202ENST00000548877 EEF1AKMT3Q96AZ1 226 aa9.97□□□□□ -0.81
CDX2-202ENST00000548877 RRNAD1Q96FB5 475 aaKnown RBP9.97□□□□□ -0.81
CDX2-202ENST00000548877 AQP10Q96PS8 301 aa9.97□□□□□ -0.81
CDX2-202ENST00000548877 C11orf68Q9H3H3 251 aaKnown RBP9.97□□□□□ -0.81
CDX2-202ENST00000548877 UBQLN2Q9UHD9 624 aa9.97□□□□□ -0.81
CDX2-202ENST00000548877 TRBV7-1A0A0A6YYK4 115 aa9.96□□□□□ -0.82
CDX2-202ENST00000548877 TNFSF12O43508 249 aa9.96□□□□□ -0.82
CDX2-202ENST00000548877 IGLV2-14P01704 120 aa9.96□□□□□ -0.82
CDX2-202ENST00000548877 IL6RP08887 468 aaPredicted RBP9.96□□□□□ -0.82
CDX2-202ENST00000548877 HIST1H1BP16401 226 aaKnown RBP9.96□□□□□ -0.82
CDX2-202ENST00000548877 AP2S1P53680 142 aaPredicted RBP9.96□□□□□ -0.82
CDX2-202ENST00000548877 ARPC5LQ9BPX5 153 aa9.96□□□□□ -0.82
CDX2-202ENST00000548877 RNF126Q9BV68 326 aa9.96□□□□□ -0.82
CDX2-202ENST00000548877 CACFD1Q9UGQ2 172 aa9.96□□□□□ -0.82
CDX2-202ENST00000548877 IGLV11-55A0A075B6I3 123 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 A0A1B0GW64 132 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 MPTX1A8MV57 137 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 E7EUB6 86 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 K7EPK0 472 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 IGHV3-23P01764 117 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 IFNA4P05014 189 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 MYOD1P15172 320 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 CTRB1P17538 263 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 MAS1LP35410 378 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 NKX2-1P43699 371 aaPredicted RBP9.95□□□□□ -0.82
CDX2-202ENST00000548877 ZNF585BQ52M93 769 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 NMSQ5H8A3 153 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 CTRB2Q6GPI1 263 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 C19orf35Q6ZS72 473 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 OR4D5Q8NGN0 318 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 LHFPL5Q8TAF8 219 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 C11orf45Q8TAV5 145 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 C2CD4CQ8TF44 421 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 PHYHIPLQ96FC7 376 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 CXorf58Q96LI9 332 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 APLNQ9ULZ1 77 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 PRELID3BQ9Y3B1 194 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 UFC1Q9Y3C8 167 aa9.95□□□□□ -0.82
CDX2-202ENST00000548877 RNF222A6NCQ9 220 aa9.94□□□□□ -0.82
CDX2-202ENST00000548877 WRBO00258 174 aa9.94□□□□□ -0.82
CDX2-202ENST00000548877 RBFOX2O43251 390 aaKnown RBP eCLIP9.94□□□□□ -0.82
CDX2-202ENST00000548877 SCGB1D2O95969 90 aa9.94□□□□□ -0.82
CDX2-202ENST00000548877 MBPP02686 304 aaPredicted RBP9.94□□□□□ -0.82
CDX2-202ENST00000548877 CLEC3BP05452 202 aa9.94□□□□□ -0.82
CDX2-202ENST00000548877 RPL27AP46776 148 aaKnown RBP9.94□□□□□ -0.82
CDX2-202ENST00000548877 P2RY1P47900 373 aa9.94□□□□□ -0.82
CDX2-202ENST00000548877 AKR1C2P52895 323 aa9.94□□□□□ -0.82
CDX2-202ENST00000548877 NANOS2P60321 138 aaKnown RBP9.94□□□□□ -0.82
CDX2-202ENST00000548877 PUSL1Q8N0Z8 303 aaKnown RBP9.94□□□□□ -0.82
CDX2-202ENST00000548877 OR1S1Q8NH92 325 aa9.94□□□□□ -0.82
CDX2-202ENST00000548877 VSTM2AQ8TAG5 236 aa9.94□□□□□ -0.82
CDX2-202ENST00000548877 TMEM167AQ8TBQ9 72 aa9.94□□□□□ -0.82
CDX2-202ENST00000548877 TCTEX1D2Q8WW35 142 aa9.94□□□□□ -0.82
CDX2-202ENST00000548877 LSM5Q9Y4Y9 91 aaKnown RBP9.94□□□□□ -0.82
CDX2-202ENST00000548877 PKD1P98161 4303 aa9.94□□□□□ -0.82
CDX2-202ENST00000548877 FAM90A26D6RGX4 464 aa9.93□□□□□ -0.82
CDX2-202ENST00000548877 H0YIZ8 118 aa9.93□□□□□ -0.82
CDX2-202ENST00000548877 KBTBD11O94819 623 aa9.93□□□□□ -0.82
CDX2-202ENST00000548877 S1PR2O95136 353 aa9.93□□□□□ -0.82
CDX2-202ENST00000548877 FCGR2BP31994 310 aaPredicted RBP9.93□□□□□ -0.82
CDX2-202ENST00000548877 EIF4EBP1Q13541 118 aaPredicted RBP9.93□□□□□ -0.82
CDX2-202ENST00000548877 EIF5AL1Q6IS14 154 aaKnown RBP9.93□□□□□ -0.82
CDX2-202ENST00000548877 ZNF502Q8TBZ5 544 aa9.93□□□□□ -0.82
CDX2-202ENST00000548877 SCARB1Q8WTV0 552 aa9.93□□□□□ -0.82
CDX2-202ENST00000548877 ZNF471Q9BX82 626 aaPredicted RBP9.93□□□□□ -0.82
CDX2-202ENST00000548877 SLC25A31Q9H0C2 315 aa9.93□□□□□ -0.82
CDX2-202ENST00000548877 OR5AC2Q9NZP5 309 aa9.93□□□□□ -0.82
CDX2-202ENST00000548877 S4R3C0 116 aa9.93□□□□□ -0.82
CDX2-202ENST00000548877 MFSD2BA6NFX1 497 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 FCGR3BO75015 233 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 ATP6V1G1O75348 118 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 MED6O75586 246 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 TPT1P13693 172 aaKnown RBP9.92□□□□□ -0.82
CDX2-202ENST00000548877 AREGP15514 252 aa9.92□□□□□ -0.82
CDX2-202ENST00000548877 RPL35AP18077 110 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms