RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 C4BPBP20851 252 aa12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 RND2P52198 227 aa12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 DHODHQ02127 395 aa12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 RBMS2Q15434 407 aaKnown RBP12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 C2orf83Q53S99 150 aa12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 TMEM268Q5VZI3 342 aa12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 STHQ8IWL8 128 aa12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 Q8NAQ8 132 aa12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 RNASEH2CQ8TDP1 164 aaKnown RBP12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 TMEM230Q96A57 120 aa12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 GPR146Q96CH1 333 aa12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 HEYLQ9NQ87 328 aaPredicted RBP12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 FBXL17Q9UF56 701 aa12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 GPR132Q9UNW8 380 aa12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 U3KQE9 123 aa12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 H3BMQ9 156 aa12.66□□□□□ -0.38
CHMP1A-205ENST00000548650 CTDSPLO15194 276 aa12.66□□□□□ -0.38
CHMP1A-205ENST00000548650 DEDDO75618 318 aa12.66□□□□□ -0.38
CHMP1A-205ENST00000548650 SLC25A4P12235 298 aa12.66□□□□□ -0.38
CHMP1A-205ENST00000548650 LGALS9CQ6DKI2 356 aa12.66□□□□□ -0.38
CHMP1A-205ENST00000548650 OR1S2Q8NGQ3 325 aa12.66□□□□□ -0.38
CHMP1A-205ENST00000548650 DYNC2LI1Q8TCX1 351 aa12.66□□□□□ -0.38
CHMP1A-205ENST00000548650 GLMPQ8WWB7 406 aa12.66□□□□□ -0.38
CHMP1A-205ENST00000548650 NARS2Q96I59 477 aaKnown RBP12.66□□□□□ -0.38
CHMP1A-205ENST00000548650 PRRT1Q99946 306 aa12.66□□□□□ -0.38
CHMP1A-205ENST00000548650 BCL7BQ9BQE9 202 aa12.66□□□□□ -0.38
CHMP1A-205ENST00000548650 TMEM56-RWDD3S4R434 201 aa12.66□□□□□ -0.38
CHMP1A-205ENST00000548650 KNCNA6PVL3 124 aa12.65□□□□□ -0.38
CHMP1A-205ENST00000548650 CEBPZOSA8MTT3 80 aa12.65□□□□□ -0.38
CHMP1A-205ENST00000548650 OR10J1P30954 320 aa12.65□□□□□ -0.38
CHMP1A-205ENST00000548650 IL18Q14116 193 aa12.65□□□□□ -0.38
CHMP1A-205ENST00000548650 OR51S1Q8NGJ8 323 aa12.65□□□□□ -0.38
CHMP1A-205ENST00000548650 CCDC59Q9P031 241 aaKnown RBP12.65□□□□□ -0.38
CHMP1A-205ENST00000548650 DNAH6Q9C0G6 4158 aa12.65□□□□□ -0.38
CHMP1A-205ENST00000548650 NXPH3O95157 252 aa12.64□□□□□ -0.39
CHMP1A-205ENST00000548650 HNRNPCP07910 306 aaKnown RBP eCLIP12.64□□□□□ -0.39
CHMP1A-205ENST00000548650 SPP1P10451 314 aa12.64□□□□□ -0.39
CHMP1A-205ENST00000548650 NPY1RP25929 384 aa12.64□□□□□ -0.39
CHMP1A-205ENST00000548650 YPEL3P61236 119 aaPredicted RBP12.64□□□□□ -0.39
CHMP1A-205ENST00000548650 USF2Q15853 346 aaPredicted RBP12.64□□□□□ -0.39
CHMP1A-205ENST00000548650 TMEM41BQ5BJD5 291 aa12.64□□□□□ -0.39
CHMP1A-205ENST00000548650 NMSQ5H8A3 153 aa12.64□□□□□ -0.39
CHMP1A-205ENST00000548650 IL22RA2Q969J5 263 aa12.64□□□□□ -0.39
CHMP1A-205ENST00000548650 DIRAS2Q96HU8 199 aa12.64□□□□□ -0.39
CHMP1A-205ENST00000548650 PRR13Q9NZ81 148 aa12.64□□□□□ -0.39
CHMP1A-205ENST00000548650 DNAH10Q8IVF4 4471 aa12.64□□□□□ -0.39
CHMP1A-205ENST00000548650 VPS13DQ5THJ4 4388 aa12.64□□□□□ -0.39
CHMP1A-205ENST00000548650 IGHV4-28A0A0C4DH34 117 aa12.63□□□□□ -0.39
CHMP1A-205ENST00000548650 ANKRD20A5PA0PJZ0 165 aa12.63□□□□□ -0.39
CHMP1A-205ENST00000548650 HELTA6NFD8 242 aa12.63□□□□□ -0.39
CHMP1A-205ENST00000548650 CCDC160A6NGH7 325 aa12.63□□□□□ -0.39
CHMP1A-205ENST00000548650 MORN3Q6PF18 240 aaPredicted RBP12.63□□□□□ -0.39
CHMP1A-205ENST00000548650 C16orf54Q6UWD8 224 aa12.63□□□□□ -0.39
CHMP1A-205ENST00000548650 Q8WTZ3 238 aa12.63□□□□□ -0.39
CHMP1A-205ENST00000548650 HRH4Q9H3N8 390 aa12.63□□□□□ -0.39
CHMP1A-205ENST00000548650 ZNF705EA8MWA4 302 aaPredicted RBP12.62□□□□□ -0.39
CHMP1A-205ENST00000548650 GSTZ1O43708 216 aaPredicted RBP12.62□□□□□ -0.39
CHMP1A-205ENST00000548650 IFNA4P05014 189 aa12.62□□□□□ -0.39
CHMP1A-205ENST00000548650 IL4P05112 153 aa12.62□□□□□ -0.39
CHMP1A-205ENST00000548650 RBMY1A1P0DJD3 496 aaKnown RBP12.62□□□□□ -0.39
CHMP1A-205ENST00000548650 RBMY1CP0DJD4 496 aa12.62□□□□□ -0.39
CHMP1A-205ENST00000548650 SULT1A3P0DMM9 295 aa12.62□□□□□ -0.39
CHMP1A-205ENST00000548650 SULT1A4P0DMN0 295 aa12.62□□□□□ -0.39
CHMP1A-205ENST00000548650 EIF2B2P49770 351 aaKnown RBP12.62□□□□□ -0.39
CHMP1A-205ENST00000548650 DHRS2Q13268 280 aa12.62□□□□□ -0.39
CHMP1A-205ENST00000548650 RBMY1FQ15415 496 aaKnown RBP12.62□□□□□ -0.39
CHMP1A-205ENST00000548650 ACTL10Q5JWF8 245 aa12.62□□□□□ -0.39
CHMP1A-205ENST00000548650 C2CD4CQ8TF44 421 aa12.62□□□□□ -0.39
CHMP1A-205ENST00000548650 RABL2AQ9UBK7 228 aaPredicted RBP12.62□□□□□ -0.39
CHMP1A-205ENST00000548650 RABL2BQ9UNT1 228 aa12.62□□□□□ -0.39
CHMP1A-205ENST00000548650 X6R8D5 127 aa12.62□□□□□ -0.39
CHMP1A-205ENST00000548650 TOMM40O96008 361 aa12.61□□□□□ -0.39
CHMP1A-205ENST00000548650 MIFP14174 115 aa12.61□□□□□ -0.39
CHMP1A-205ENST00000548650 PSMG4Q5JS54 123 aa12.61□□□□□ -0.39
CHMP1A-205ENST00000548650 ETFRF1Q6IPR1 90 aa12.61□□□□□ -0.39
CHMP1A-205ENST00000548650 CSNK1G2-AS1Q8NCQ2 148 aa12.61□□□□□ -0.39
CHMP1A-205ENST00000548650 NPIPB3Q92617 1050 aa12.61□□□□□ -0.39
CHMP1A-205ENST00000548650 ACY3Q96HD9 319 aa12.61□□□□□ -0.39
CHMP1A-205ENST00000548650 HSPB7Q9UBY9 170 aa12.61□□□□□ -0.39
CHMP1A-205ENST00000548650 CACFD1Q9UGQ2 172 aa12.61□□□□□ -0.39
CHMP1A-205ENST00000548650 FAM90A26D6RGX4 464 aa12.6□□□□□ -0.39
CHMP1A-205ENST00000548650 SUPT4H1P63272 117 aaKnown RBP12.6□□□□□ -0.39
CHMP1A-205ENST00000548650 PRR20EP86478 221 aa12.6□□□□□ -0.39
CHMP1A-205ENST00000548650 PRR20CP86479 221 aa12.6□□□□□ -0.39
CHMP1A-205ENST00000548650 PRR20DP86480 221 aa12.6□□□□□ -0.39
CHMP1A-205ENST00000548650 PRR20BP86481 221 aa12.6□□□□□ -0.39
CHMP1A-205ENST00000548650 PRR20AP86496 221 aa12.6□□□□□ -0.39
CHMP1A-205ENST00000548650 SLIRPQ9GZT3 109 aaKnown RBP12.6□□□□□ -0.39
CHMP1A-205ENST00000548650 CLEC5AQ9NY25 188 aa12.6□□□□□ -0.39
CHMP1A-205ENST00000548650 A0A0B4J2A0 478 aa12.59□□□□□ -0.39
CHMP1A-205ENST00000548650 BUB3O43684 328 aa12.59□□□□□ -0.39
CHMP1A-205ENST00000548650 CCR6P51684 374 aa12.59□□□□□ -0.39
CHMP1A-205ENST00000548650 AP2S1P53680 142 aaPredicted RBP12.59□□□□□ -0.39
CHMP1A-205ENST00000548650 TCTAP57738 103 aa12.59□□□□□ -0.39
CHMP1A-205ENST00000548650 SMCO1Q147U7 214 aa12.59□□□□□ -0.39
CHMP1A-205ENST00000548650 NOXA1Q86UR1 476 aa12.59□□□□□ -0.39
CHMP1A-205ENST00000548650 MCFD2Q8NI22 146 aa12.59□□□□□ -0.39
CHMP1A-205ENST00000548650 DTD1Q8TEA8 209 aa12.59□□□□□ -0.39
CHMP1A-205ENST00000548650 RAB40CQ96S21 281 aa12.59□□□□□ -0.39
CHMP1A-205ENST00000548650 NRN1Q9NPD7 142 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 234.4 ms