RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 OR10J1P30954 320 aa22.3■■□□□ 1.16
BRF1-213ENST00000548421 RUNX1Q01196 453 aa22.3■■□□□ 1.16
BRF1-213ENST00000548421 RAB31Q13636 194 aa22.3■■□□□ 1.16
BRF1-213ENST00000548421 BAP18Q8IXM2 172 aa22.3■■□□□ 1.16
BRF1-213ENST00000548421 IGKV1D-37A0A075B6S9 117 aa22.29■■□□□ 1.16
BRF1-213ENST00000548421 TRAV30A0A087WSZ9 112 aa22.29■■□□□ 1.16
BRF1-213ENST00000548421 IGHV3-11P01762 117 aa22.29■■□□□ 1.16
BRF1-213ENST00000548421 IGLC1P0CG04 106 aa22.29■■□□□ 1.16
BRF1-213ENST00000548421 TCTEX1D4Q5JR98 221 aa22.29■■□□□ 1.16
BRF1-213ENST00000548421 UBE2E2Q96LR5 201 aa22.29■■□□□ 1.16
BRF1-213ENST00000548421 OR2T8A6NH00 312 aa22.28■■□□□ 1.16
BRF1-213ENST00000548421 AGPAT2O15120 278 aa22.28■■□□□ 1.16
BRF1-213ENST00000548421 SCGB2A1O75556 95 aa22.28■■□□□ 1.16
BRF1-213ENST00000548421 ATP6V0CP27449 155 aa22.28■■□□□ 1.16
BRF1-213ENST00000548421 GPR183P32249 361 aa22.28■■□□□ 1.16
BRF1-213ENST00000548421 CAMLGP49069 296 aa22.28■■□□□ 1.16
BRF1-213ENST00000548421 FOXL1Q12952 345 aa22.28■■□□□ 1.16
BRF1-213ENST00000548421 ZNF343Q6P1L6 599 aa22.28■■□□□ 1.16
BRF1-213ENST00000548421 CLEC19AQ6UXS0 136 aa22.28■■□□□ 1.16
BRF1-213ENST00000548421 PRIMA1Q86XR5 153 aa22.28■■□□□ 1.16
BRF1-213ENST00000548421 GNPNAT1Q96EK6 184 aaPredicted RBP22.28■■□□□ 1.16
BRF1-213ENST00000548421 TRGV9Q99603 122 aa22.28■■□□□ 1.16
BRF1-213ENST00000548421 RSG1Q9BU20 258 aa22.28■■□□□ 1.16
BRF1-213ENST00000548421 CLEC3BP05452 202 aa22.28■■□□□ 1.16
BRF1-213ENST00000548421 ZNF709Q8N972 641 aa22.28■■□□□ 1.16
BRF1-213ENST00000548421 GGTLC1Q9BX51 225 aa22.28■■□□□ 1.16
BRF1-213ENST00000548421 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP22.27■■□□□ 1.16
BRF1-213ENST00000548421 TCRBV4S1A1TA0A5B7 111 aa22.27■■□□□ 1.16
BRF1-213ENST00000548421 C17orf112F2Z3M2 114 aa22.27■■□□□ 1.16
BRF1-213ENST00000548421 FAM209BQ5JX69 171 aa22.27■■□□□ 1.16
BRF1-213ENST00000548421 TIMM9Q9Y5J7 89 aa22.27■■□□□ 1.16
BRF1-213ENST00000548421 SH3BGRL3Q9H299 93 aa22.26■■□□□ 1.15
BRF1-213ENST00000548421 NUPL2O15504 423 aaKnown RBP22.25■■□□□ 1.15
BRF1-213ENST00000548421 IGKV1-17P01599 117 aa22.25■■□□□ 1.15
BRF1-213ENST00000548421 CD28P10747 220 aa22.25■■□□□ 1.15
BRF1-213ENST00000548421 ZNF90Q03938 601 aa22.25■■□□□ 1.15
BRF1-213ENST00000548421 TIGITQ495A1 244 aa22.25■■□□□ 1.15
BRF1-213ENST00000548421 CYP2G1PQ6ZSU1 146 aa22.25■■□□□ 1.15
BRF1-213ENST00000548421 PSMG3Q9BT73 122 aaPredicted RBP22.25■■□□□ 1.15
BRF1-213ENST00000548421 GNB4Q9HAV0 340 aa22.25■■□□□ 1.15
BRF1-213ENST00000548421 KCNIP2Q9NS61 270 aa22.25■■□□□ 1.15
BRF1-213ENST00000548421 TGOLN2O43493 480 aa22.24■■□□□ 1.15
BRF1-213ENST00000548421 CTSGP08311 255 aa22.24■■□□□ 1.15
BRF1-213ENST00000548421 SPP1P10451 314 aa22.24■■□□□ 1.15
BRF1-213ENST00000548421 CDX1P47902 265 aaPredicted RBP22.24■■□□□ 1.15
BRF1-213ENST00000548421 KHDC1LQ5JSQ8 128 aa22.24■■□□□ 1.15
BRF1-213ENST00000548421 SPSB3Q6PJ21 355 aa22.24■■□□□ 1.15
BRF1-213ENST00000548421 SLC25A32Q9H2D1 315 aa22.24■■□□□ 1.15
BRF1-213ENST00000548421 SLC45A2Q9UMX9 530 aa22.24■■□□□ 1.15
BRF1-213ENST00000548421 ATRQ13535 2644 aa22.24■■□□□ 1.15
BRF1-213ENST00000548421 FABP1P07148 127 aa22.23■■□□□ 1.15
BRF1-213ENST00000548421 LGALS1P09382 135 aaKnown RBP22.23■■□□□ 1.15
BRF1-213ENST00000548421 SELENOTP62341 195 aa22.23■■□□□ 1.15
BRF1-213ENST00000548421 EIF5AL1Q6IS14 154 aaKnown RBP22.23■■□□□ 1.15
BRF1-213ENST00000548421 WFDC12Q8WWY7 111 aa22.23■■□□□ 1.15
BRF1-213ENST00000548421 OR5B12Q96R08 314 aa22.23■■□□□ 1.15
BRF1-213ENST00000548421 CHRDL1Q9BU40 450 aa22.23■■□□□ 1.15
BRF1-213ENST00000548421 SEC11BP0C7V7 166 aa22.22■■□□□ 1.15
BRF1-213ENST00000548421 ADMP35318 185 aa22.22■■□□□ 1.15
BRF1-213ENST00000548421 RPL29P47914 159 aaKnown RBP22.22■■□□□ 1.15
BRF1-213ENST00000548421 KRTAP24-1Q3LI83 254 aa22.22■■□□□ 1.15
BRF1-213ENST00000548421 C11orf44Q8N8P7 122 aa22.22■■□□□ 1.15
BRF1-213ENST00000548421 PHYHIPLQ96FC7 376 aa22.22■■□□□ 1.15
BRF1-213ENST00000548421 PEF1Q9UBV8 284 aaKnown RBP22.22■■□□□ 1.15
BRF1-213ENST00000548421 RFNGQ9Y644 331 aa22.22■■□□□ 1.15
BRF1-213ENST00000548421 ANKRD34BA5PLL1 514 aa22.22■■□□□ 1.15
BRF1-213ENST00000548421 PPP5D1E7EU14 171 aa22.22■■□□□ 1.15
BRF1-213ENST00000548421 TRBV12-3P01733 135 aa22.22■■□□□ 1.15
BRF1-213ENST00000548421 ARL3P36405 182 aa22.22■■□□□ 1.15
BRF1-213ENST00000548421 YPEL3P61236 119 aaPredicted RBP22.22■■□□□ 1.15
BRF1-213ENST00000548421 MIC13Q5XKP0 118 aa22.22■■□□□ 1.15
BRF1-213ENST00000548421 PXMP4Q9Y6I8 212 aa22.22■■□□□ 1.15
BRF1-213ENST00000548421 CFDP00746 253 aaPredicted RBP22.21■■□□□ 1.15
BRF1-213ENST00000548421 TMEM182Q6ZP80 229 aaPredicted RBP22.21■■□□□ 1.15
BRF1-213ENST00000548421 STPG3Q8N7X2 389 aa22.21■■□□□ 1.15
BRF1-213ENST00000548421 BPIFCQ8NFQ6 507 aa22.21■■□□□ 1.15
BRF1-213ENST00000548421 OR2G3Q8NGZ4 309 aa22.21■■□□□ 1.15
BRF1-213ENST00000548421 TMED6Q8WW62 240 aa22.21■■□□□ 1.15
BRF1-213ENST00000548421 TOMM40O96008 361 aa22.2■■□□□ 1.14
BRF1-213ENST00000548421 GATA2P23769 480 aaPredicted RBP22.2■■□□□ 1.14
BRF1-213ENST00000548421 B2MP61769 119 aa22.2■■□□□ 1.14
BRF1-213ENST00000548421 PRR20EP86478 221 aa22.2■■□□□ 1.14
BRF1-213ENST00000548421 PRR20CP86479 221 aa22.2■■□□□ 1.14
BRF1-213ENST00000548421 PRR20DP86480 221 aa22.2■■□□□ 1.14
BRF1-213ENST00000548421 PRR20BP86481 221 aa22.2■■□□□ 1.14
BRF1-213ENST00000548421 PRR20AP86496 221 aa22.2■■□□□ 1.14
BRF1-213ENST00000548421 ZNF616Q08AN1 781 aa22.2■■□□□ 1.14
BRF1-213ENST00000548421 C4orf3Q8WVX3 66 aa22.2■■□□□ 1.14
BRF1-213ENST00000548421 CITED2Q99967 270 aaPredicted RBP22.2■■□□□ 1.14
BRF1-213ENST00000548421 TSSC4Q9Y5U2 329 aaPredicted RBP22.2■■□□□ 1.14
BRF1-213ENST00000548421 TSPAN15O95858 294 aa22.19■■□□□ 1.14
BRF1-213ENST00000548421 RD3LP0DJH9 198 aa22.19■■□□□ 1.14
BRF1-213ENST00000548421 PSG1P11464 419 aa22.19■■□□□ 1.14
BRF1-213ENST00000548421 SERF2P84101 59 aa22.19■■□□□ 1.14
BRF1-213ENST00000548421 AWAT1Q58HT5 328 aa22.19■■□□□ 1.14
BRF1-213ENST00000548421 TEX261Q6UWH6 196 aa22.19■■□□□ 1.14
BRF1-213ENST00000548421 I3L521 148 aa22.18■■□□□ 1.14
BRF1-213ENST00000548421 RELQ04864 619 aaPredicted RBP22.18■■□□□ 1.14
BRF1-213ENST00000548421 KLHL30-AS1Q8NEE0 82 aa22.18■■□□□ 1.14
BRF1-213ENST00000548421 SLC39A9Q9NUM3 307 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms