RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	YIPF6	Q96EC8	236 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	PACRG	Q96M98	296 aa	Predicted RBP	2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	ZNF488	Q96MN9	340 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	NMNAT3	Q96T66	252 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	HIST1H4G	Q99525	98 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	APOL4	Q9BPW4	351 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	NABP2	Q9BQ15	211 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	TMEM208	Q9BTX3	173 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	GGTLC1	Q9BX51	225 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	CST11	Q9H112	138 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	METTL9	Q9H1A3	318 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	HES4	Q9HCC6	221 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	AMBN	Q9NP70	447 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	IMPAD1	Q9NX62	359 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	BABAM2	Q9NXR7	383 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	CALY	Q9NYX4	217 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	CCDC167	Q9P0B6	97 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	OR1A1	Q9P1Q5	309 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	SLC7A11	Q9UPY5	501 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	AP3M1	Q9Y2T2	418 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	FAM32A	Q9Y421	112 aa	Known RBP	2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	UBR4	Q5T4S7	5183 aa		2.23	□□□□□ -2.05
RPAP3-205	ENST00000548211	HERC1	Q15751	4861 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211		A0A087WUU8	490 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	KIR2DL5B	A0A0G2JN68	375 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	KIR2DL5B	A0A0G2JPC4	375 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	FAM240A	A0A1B0GVK7	77 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	DHRS12	A0PJE2	317 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211		A6NDN8	102 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	C16orf90	A8MZG2	172 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	C11orf94	C9JXX5	98 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211		F5H768	121 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	CDC42EP2	O14613	210 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	TGOLN2	O43493	480 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	HAND1	O96004	215 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	NRAS	P01111	189 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	RLN2	P04090	185 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	SHBG	P04278	402 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	CDK1	P06493	297 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	FABP1	P07148	127 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	CT45A10	P0DMU9	189 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	MYL9	P24844	172 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	OMP	P47874	163 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	OR10A3	P58181	314 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	SMIM11A	P58511	58 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	MTPN	P58546	118 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	NUTF2	P61970	127 aa	Known RBP	2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	SELENOW	P63302	87 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	CXCL6	P80162	114 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	ZNF816	Q0VGE8	651 aa	Predicted RBP	2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	ZNF266	Q14584	549 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	GUK1	Q16774	197 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	KLHL12	Q53G59	568 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	EPGN	Q6UW88	154 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	TCF23	Q7RTU1	214 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	KIR2DL5A	Q8N109	375 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	ARRDC1	Q8N5I2	433 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	YIPF7	Q8N8F6	280 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211		Q8N9W7	124 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	OR51G1	Q8NGK1	321 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	OR10R2	Q8NGX6	335 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	OR10A6	Q8NH74	314 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	KIR2DL5B	Q8NHK3	375 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	TEX47	Q8TBZ9	253 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	DYNLRB2	Q8TF09	96 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	TMEM230	Q96A57	120 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	FGGY	Q96C11	551 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	SMIM19	Q96E16	107 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	CEP19	Q96LK0	163 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	TMEM56	Q96MV1	263 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	CGREF1	Q99674	301 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	C20orf27	Q9GZN8	174 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	ZNF286A	Q9HBT8	521 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	SLC2A9	Q9NRM0	540 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	ZNF355P	Q9NSJ1	428 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	DNAJC27	Q9NZQ0	273 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	ST3GAL6	Q9Y274	331 aa		2.22	□□□□□ -2.05
RPAP3-205	ENST00000548211	DNAH11	Q96DT5	4516 aa		2.21	□□□□□ -2.05
RPAP3-205	ENST00000548211	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	IGHV1-3	A0A0C4DH29	117 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211		A0A0G2JRQ6	117 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	ODAM	A1E959	279 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	TNFRSF11B	O00300	401 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	GABRP	O00591	440 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	SLC17A2	O00624	439 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	FABP7	O15540	132 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	GATB	O75879	557 aa	Known RBP	2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	MMP23A	O75900	390 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	DHRS3	O75911	302 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	OR2A4	O95047	310 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	IFNG	P01579	166 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	HLA-DRB1	P01911	266 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	TCRB	P04435	133 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	CSN2	P05814	226 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	EIF4E	P06730	217 aa	Known RBP	2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211		P0DMU3	169 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	FAM231A	P0DMU4	169 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	FAM231C	P0DMU5	169 aa		2.21	□□□□□ -2.06
RPAP3-205	ENST00000548211	DTYMK	P23919	212 aa		2.21	□□□□□ -2.06

Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms