RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 KBTBD11-OT1A0A1B0GTJ5 212 aa13.34□□□□□ -0.27
BRF1-208ENST00000546997 FCN1O00602 326 aa13.34□□□□□ -0.27
BRF1-208ENST00000546997 CBLN1P23435 193 aa13.34□□□□□ -0.27
BRF1-208ENST00000546997 DUTP33316 252 aaKnown RBP13.34□□□□□ -0.27
BRF1-208ENST00000546997 RPP30P78346 268 aaKnown RBP13.34□□□□□ -0.27
BRF1-208ENST00000546997 BATFQ16520 125 aa13.34□□□□□ -0.27
BRF1-208ENST00000546997 RPEL1Q2QD12 228 aa13.34□□□□□ -0.27
BRF1-208ENST00000546997 AARDQ4LEZ3 155 aa13.34□□□□□ -0.27
BRF1-208ENST00000546997 SPATA45Q537H7 98 aa13.34□□□□□ -0.27
BRF1-208ENST00000546997 PNKDQ8N490 385 aa13.34□□□□□ -0.27
BRF1-208ENST00000546997 OCC1Q8TAD7 63 aa13.34□□□□□ -0.27
BRF1-208ENST00000546997 CORO2AQ92828 525 aa13.34□□□□□ -0.27
BRF1-208ENST00000546997 CLN8Q9UBY8 286 aa13.34□□□□□ -0.27
BRF1-208ENST00000546997 FBXL7Q9UJT9 491 aa13.34□□□□□ -0.27
BRF1-208ENST00000546997 OR5G3P0C626 314 aa13.33□□□□□ -0.28
BRF1-208ENST00000546997 MEF2CQ06413 473 aaPredicted RBP13.33□□□□□ -0.28
BRF1-208ENST00000546997 UBE2V1Q13404 147 aa13.33□□□□□ -0.28
BRF1-208ENST00000546997 HLA-DRB5Q30154 266 aa13.33□□□□□ -0.28
BRF1-208ENST00000546997 DERL1Q9BUN8 251 aa13.33□□□□□ -0.28
BRF1-208ENST00000546997 RAB9BQ9NP90 201 aa13.33□□□□□ -0.28
BRF1-208ENST00000546997 CCDC168Q8NDH2 2452 aa13.33□□□□□ -0.28
BRF1-208ENST00000546997 FAM90A9PA6NNJ1 464 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 NDUFB8O95169 186 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 MT-CO2P00403 227 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 AREGP15514 252 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 HNRNPA3P51991 378 aaKnown RBP13.32□□□□□ -0.28
BRF1-208ENST00000546997 PTTG1IPP53801 180 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 PRRX1P54821 245 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 RPS20P60866 119 aaKnown RBP13.32□□□□□ -0.28
BRF1-208ENST00000546997 FAM168AQ92567 244 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 KCNS1Q96KK3 526 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 IFI27L2Q9H2X8 130 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 HYPMO75409 117 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 IGHV3-7P01780 117 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 MMDQ15546 238 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 PMCHL1Q16048 86 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 PRAMEF5Q5TYX0 476 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 STPG4Q8N801 248 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 C10orf105Q8TEF2 133 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 ZNF714Q96N38 554 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 LINC00574Q9H8X3 128 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 NRN1Q9NPD7 142 aa13.32□□□□□ -0.28
BRF1-208ENST00000546997 A0A1W2PN81 502 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 C22orf46C9J442 243 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 CD33P20138 364 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 C1orf122Q6ZSJ8 110 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 ZNF738Q8NE65 137 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 LEAP2Q969E1 77 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 UHRF2Q96PU4 802 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 GSX1Q9H4S2 264 aaPredicted RBP13.31□□□□□ -0.28
BRF1-208ENST00000546997 RPUSD1Q9UJJ7 312 aaKnown RBP13.31□□□□□ -0.28
BRF1-208ENST00000546997 PDZD2O15018 2839 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 SNURFLB1AK76 121 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 TFPI2P48307 235 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 DLX6P56179 175 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 UBE2G2P60604 165 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 RPL39P5Q59GN2 51 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 CLEC2AQ6UVW9 174 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 H2BFWTQ7Z2G1 175 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 TXN2Q99757 166 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 PIMREGQ9BSJ6 248 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 SSBP3Q9BWW4 388 aaPredicted RBP13.31□□□□□ -0.28
BRF1-208ENST00000546997 GNB4Q9HAV0 340 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 BET1LQ9NYM9 111 aa13.31□□□□□ -0.28
BRF1-208ENST00000546997 TBL2Q9Y4P3 447 aaKnown RBP13.31□□□□□ -0.28
BRF1-208ENST00000546997 ZANQ9Y493 2812 aa13.3□□□□□ -0.28
BRF1-208ENST00000546997 IGHV4-30-2A0A087WSY4 118 aa13.3□□□□□ -0.28
BRF1-208ENST00000546997 C15orf62A8K5M9 175 aa13.3□□□□□ -0.28
BRF1-208ENST00000546997 VWC2LB2RUY7 222 aa13.3□□□□□ -0.28
BRF1-208ENST00000546997 M0R1X1 148 aa13.3□□□□□ -0.28
BRF1-208ENST00000546997 KRTDAPP60985 99 aa13.3□□□□□ -0.28
BRF1-208ENST00000546997 CX3CL1P78423 397 aa13.3□□□□□ -0.28
BRF1-208ENST00000546997 CT45A1Q5HYN5 189 aa13.3□□□□□ -0.28
BRF1-208ENST00000546997 MMD2Q8IY49 270 aa13.3□□□□□ -0.28
BRF1-208ENST00000546997 CT45A3Q8NHU0 189 aa13.3□□□□□ -0.28
BRF1-208ENST00000546997 SLC35D1Q9NTN3 355 aa13.3□□□□□ -0.28
BRF1-208ENST00000546997 CCL25O15444 150 aa13.29□□□□□ -0.28
BRF1-208ENST00000546997 FCGR3BO75015 233 aa13.29□□□□□ -0.28
BRF1-208ENST00000546997 LMO4P61968 165 aa13.29□□□□□ -0.28
BRF1-208ENST00000546997 Q6ZN92 141 aa13.29□□□□□ -0.28
BRF1-208ENST00000546997 C1orf229Q6ZS94 237 aaPredicted RBP13.29□□□□□ -0.28
BRF1-208ENST00000546997 IDI2-AS1Q9NZ38 188 aa13.29□□□□□ -0.28
BRF1-208ENST00000546997 MRPL27Q9P0M9 148 aaKnown RBP13.29□□□□□ -0.28
BRF1-208ENST00000546997 COX11Q9Y6N1 276 aa13.29□□□□□ -0.28
BRF1-208ENST00000546997 CELSR1Q9NYQ6 3014 aa13.29□□□□□ -0.28
BRF1-208ENST00000546997 ARL14EPLP0DKL9 152 aa13.29□□□□□ -0.28
BRF1-208ENST00000546997 ZFP36P26651 326 aaKnown RBP13.29□□□□□ -0.28
BRF1-208ENST00000546997 IER3P46695 156 aa13.29□□□□□ -0.28
BRF1-208ENST00000546997 RHOBP62745 196 aa13.29□□□□□ -0.28
BRF1-208ENST00000546997 PDLIM3Q53GG5 364 aaPredicted RBP13.29□□□□□ -0.28
BRF1-208ENST00000546997 C8orf46Q8TAG6 207 aa13.29□□□□□ -0.28
BRF1-208ENST00000546997 OSTCQ9NRP0 149 aa13.29□□□□□ -0.28
BRF1-208ENST00000546997 V9GYV3 84 aa13.29□□□□□ -0.28
BRF1-208ENST00000546997 IGHV4-61A0A0C4DH41 118 aa13.28□□□□□ -0.28
BRF1-208ENST00000546997 SCO2A0A1W2PP80 73 aa13.28□□□□□ -0.28
BRF1-208ENST00000546997 A0A1W2PS18 150 aa13.28□□□□□ -0.28
BRF1-208ENST00000546997 PGPEP1LA6NFU8 196 aa13.28□□□□□ -0.28
BRF1-208ENST00000546997 J3KRW8 73 aa13.28□□□□□ -0.28
BRF1-208ENST00000546997 NDUFS8O00217 210 aa13.28□□□□□ -0.28
BRF1-208ENST00000546997 ZNF324O75467 553 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms