RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 PRSS46E5RG02 174 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 FNDC10F2Z333 226 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 M0R036 132 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 TIMM23O14925 209 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 CHST1O43916 411 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 NXPH3O95157 252 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 BRI3O95415 125 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 SAA4P35542 130 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 ID1P41134 155 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 REG1BP48304 166 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 SULT1A1P50225 295 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 S100A10P60903 97 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 HSPE1P61604 102 aaKnown RBP6.7□□□□□ -1.34
VPS29-203ENST00000546588 EWSR1Q01844 656 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS29-203ENST00000546588 IZUMO4Q1ZYL8 232 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 VWC2Q2TAL6 325 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 KLK9Q2XQG4 91 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 VMA21Q3ZAQ7 101 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 KLF17Q5JT82 389 aaPredicted RBP6.7□□□□□ -1.34
VPS29-203ENST00000546588 TEX261Q6UWH6 196 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 DYNAPQ8N1N2 210 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 OR4C5Q8NGB2 326 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 TSNAXQ99598 290 aaKnown RBP6.7□□□□□ -1.34
VPS29-203ENST00000546588 TMEM208Q9BTX3 173 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 SLC25A31Q9H0C2 315 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 ARL6Q9H0F7 186 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 NDUFA4L2Q9NRX3 87 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 KLK9Q9UKQ9 250 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 SIGLEC9Q9Y336 463 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 LSM5Q9Y4Y9 91 aaKnown RBP6.7□□□□□ -1.34
VPS29-203ENST00000546588 U3KQ87 197 aa6.7□□□□□ -1.34
VPS29-203ENST00000546588 CELSR1Q9NYQ6 3014 aa6.69□□□□□ -1.34
VPS29-203ENST00000546588 CSMD1Q96PZ7 3565 aa6.69□□□□□ -1.34
VPS29-203ENST00000546588 TRAV3A0A0B4J244 114 aa6.69□□□□□ -1.34
VPS29-203ENST00000546588 IGSF23A1L1A6 192 aa6.69□□□□□ -1.34
VPS29-203ENST00000546588 CGB1A6NKQ9 187 aa6.69□□□□□ -1.34
VPS29-203ENST00000546588 SNAI2O43623 268 aa6.69□□□□□ -1.34
VPS29-203ENST00000546588 SSSCA1O60232 199 aa6.69□□□□□ -1.34
VPS29-203ENST00000546588 MOSP00540 346 aa6.69□□□□□ -1.34
VPS29-203ENST00000546588 MDKP21741 143 aaPredicted RBP6.69□□□□□ -1.34
VPS29-203ENST00000546588 RPL8P62917 257 aaKnown RBP6.69□□□□□ -1.34
VPS29-203ENST00000546588 UBA52P62987 128 aaKnown RBP6.69□□□□□ -1.34
VPS29-203ENST00000546588 PSG5Q15238 335 aa6.69□□□□□ -1.34
VPS29-203ENST00000546588 ATP6V1FQ16864 119 aa6.69□□□□□ -1.34
VPS29-203ENST00000546588 HSD17B13Q7Z5P4 300 aaPredicted RBP6.69□□□□□ -1.34
VPS29-203ENST00000546588 MMD2Q8IY49 270 aa6.69□□□□□ -1.34
VPS29-203ENST00000546588 EIF4E3Q8N5X7 224 aaKnown RBP6.69□□□□□ -1.34
VPS29-203ENST00000546588 OR4A16Q8NH70 328 aa6.69□□□□□ -1.34
VPS29-203ENST00000546588 Q96MF0 132 aa6.69□□□□□ -1.34
VPS29-203ENST00000546588 QTRT1Q9BXR0 403 aaKnown RBP6.69□□□□□ -1.34
VPS29-203ENST00000546588 RBKSQ9H477 322 aa6.69□□□□□ -1.34
VPS29-203ENST00000546588 UBQLN2Q9UHD9 624 aa6.69□□□□□ -1.34
VPS29-203ENST00000546588 TCF19Q9Y242 345 aa6.69□□□□□ -1.34
VPS29-203ENST00000546588 CENPEQ02224 2701 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 TRAV40A0A0B4J280 105 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 TRBV7-9A0A0J9YWB2 115 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 A0A1B0GW64 132 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 KANTRA0A1W2PQU2 76 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 RRHO14718 337 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 NBR2O15453 112 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 JTBO76095 146 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 CRIP2P52943 208 aaPredicted RBP6.68□□□□□ -1.34
VPS29-203ENST00000546588 OR2B8PP59922 312 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 RAB5BP61020 215 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 ZNF266Q14584 549 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 PRSS8Q16651 343 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 C2orf83Q53S99 150 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 RBMS3Q6XE24 437 aaKnown RBP6.68□□□□□ -1.34
VPS29-203ENST00000546588 Q6ZWC4 215 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 TMEM144Q7Z5S9 345 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 HAPLN4Q86UW8 402 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 PPP1R27Q86WC6 154 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 VKORC1L1Q8N0U8 176 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 OR1L8Q8NGR8 309 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 OR2T10Q8NGZ9 312 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 PIFOQ8TCI5 191 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 TMEM170AQ8WVE7 144 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 RITA1Q96K30 269 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 NOL4LQ96MY1 436 aaPredicted RBP6.68□□□□□ -1.34
VPS29-203ENST00000546588 WWC2-AS2Q96NR7 200 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 FBXL17Q9UF56 701 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 ZNF580Q9UK33 172 aa6.68□□□□□ -1.34
VPS29-203ENST00000546588 SPG11Q96JI7 2443 aa6.67□□□□□ -1.34
VPS29-203ENST00000546588 TEX50A0A1B0GTY4 177 aa6.67□□□□□ -1.34
VPS29-203ENST00000546588 C15orf62A8K5M9 175 aa6.67□□□□□ -1.34
VPS29-203ENST00000546588 NPIPB5A8MRT5 1133 aa6.67□□□□□ -1.34
VPS29-203ENST00000546588 FGF16O43320 207 aa6.67□□□□□ -1.34
VPS29-203ENST00000546588 HLA-DRB1P01911 266 aa6.67□□□□□ -1.34
VPS29-203ENST00000546588 OR8U8P0C7N1 319 aa6.67□□□□□ -1.34
VPS29-203ENST00000546588 BRS3P32247 399 aa6.67□□□□□ -1.34
VPS29-203ENST00000546588 EIF5AP63241 154 aaKnown RBP6.67□□□□□ -1.34
VPS29-203ENST00000546588 KRTAP1-1Q07627 177 aa6.67□□□□□ -1.34
VPS29-203ENST00000546588 HIST2H2BCQ6DN03 193 aa6.67□□□□□ -1.34
VPS29-203ENST00000546588 C16orf82Q7Z2V1 217 aa6.67□□□□□ -1.34
VPS29-203ENST00000546588 CENPVQ7Z7K6 275 aaPredicted RBP6.67□□□□□ -1.34
VPS29-203ENST00000546588 MOB3BQ86TA1 216 aa6.67□□□□□ -1.34
VPS29-203ENST00000546588 TEX29Q8N6K0 151 aa6.67□□□□□ -1.34
VPS29-203ENST00000546588 SFRP2Q96HF1 295 aa6.67□□□□□ -1.34
VPS29-203ENST00000546588 OR4C12Q96R67 309 aa6.67□□□□□ -1.34
VPS29-203ENST00000546588 GINS3Q9BRX5 216 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms