RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 NTF3P20783 257 aa9.3□□□□□ -0.92
DDB1-224ENST00000545894 KLF3P57682 345 aaPredicted RBP9.3□□□□□ -0.92
DDB1-224ENST00000545894 FAM27E3Q08E93 113 aa9.3□□□□□ -0.92
DDB1-224ENST00000545894 SLAQ13239 276 aa9.3□□□□□ -0.92
DDB1-224ENST00000545894 NHLRC2Q8NBF2 726 aa9.3□□□□□ -0.92
DDB1-224ENST00000545894 C18orf32Q8TCD1 76 aa9.3□□□□□ -0.92
DDB1-224ENST00000545894 FAM222BQ8WU58 562 aa9.3□□□□□ -0.92
DDB1-224ENST00000545894 FAM167A-AS1Q96KT0 104 aa9.3□□□□□ -0.92
DDB1-224ENST00000545894 BET1LQ9NYM9 111 aa9.3□□□□□ -0.92
DDB1-224ENST00000545894 TRAV5A0A0B4J249 113 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 SELENOVP59797 346 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 ALKBH2Q6NS38 261 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 DUX4L9Q6RFH8 374 aaPredicted RBP9.29□□□□□ -0.92
DDB1-224ENST00000545894 SLC25A48Q6ZT89 311 aaKnown RBP9.29□□□□□ -0.92
DDB1-224ENST00000545894 FAM231DQ6ZW35 169 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 C11orf42Q8N5U0 333 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 CACNG8Q8WXS5 425 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 FAM168AQ92567 244 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 ZNF714Q96N38 554 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 SSBP3Q9BWW4 388 aaPredicted RBP9.29□□□□□ -0.92
DDB1-224ENST00000545894 WNT10AQ9GZT5 417 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 PSMB11A5LHX3 300 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 SAA1P0DJI8 122 aaPredicted RBP9.29□□□□□ -0.92
DDB1-224ENST00000545894 GRNP28799 593 aaKnown RBP9.29□□□□□ -0.92
DDB1-224ENST00000545894 TMEM30BQ3MIR4 351 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 MORN5Q5VZ52 161 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 MBD6Q96DN6 1003 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 LINC00479Q96M42 142 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 LINC00574Q9H8X3 128 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 DNAJC4Q9NNZ3 241 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 RNF7Q9UBF6 113 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 LAMTOR2Q9Y2Q5 125 aa9.29□□□□□ -0.92
DDB1-224ENST00000545894 AMMECR1Q9Y4X0 333 aaPredicted RBP9.29□□□□□ -0.92
DDB1-224ENST00000545894 NBASA2RRP1 2371 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 M0R1B8 84 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 SIAH2O43255 324 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 GLRXP35754 106 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 GATA4P43694 442 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 MFAP2P55001 183 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 PMCHL1Q16048 86 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 FBXL19-AS1Q494R0 122 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 DMRTA1Q5VZB9 504 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 STUMQ69YW2 141 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 VHLLQ6RSH7 139 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 STPG4Q8N801 248 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 OR10W1Q8NGF6 305 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 GRAMD2BQ96HH9 432 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 RPUSD1Q9UJJ7 312 aaKnown RBP9.28□□□□□ -0.92
DDB1-224ENST00000545894 CBY1Q9Y3M2 126 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 UBR5O95071 2799 aaPredicted RBP9.28□□□□□ -0.92
DDB1-224ENST00000545894 ERHP84090 104 aaKnown RBP9.28□□□□□ -0.92
DDB1-224ENST00000545894 OR2T6Q8NHC8 308 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 RNASE6Q93091 150 aaKnown RBP9.28□□□□□ -0.92
DDB1-224ENST00000545894 GAFA1Q96PS6 74 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 CLEC7AQ9BXN2 247 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 ZNF355PQ9NSJ1 428 aa9.28□□□□□ -0.92
DDB1-224ENST00000545894 PRR14LQ5THK1 2151 aa9.27□□□□□ -0.92
DDB1-224ENST00000545894 PEX7O00628 323 aa9.27□□□□□ -0.93
DDB1-224ENST00000545894 COX7A2P2O60397 106 aa9.27□□□□□ -0.93
DDB1-224ENST00000545894 HSBP1O75506 76 aa9.27□□□□□ -0.93
DDB1-224ENST00000545894 KLF5Q13887 457 aaPredicted RBP9.27□□□□□ -0.93
DDB1-224ENST00000545894 TNXAQ16473 311 aa9.27□□□□□ -0.93
DDB1-224ENST00000545894 ZNF329Q86UD4 541 aa9.27□□□□□ -0.93
DDB1-224ENST00000545894 DEFB108BQ8NET1 73 aa9.27□□□□□ -0.93
DDB1-224ENST00000545894 NUP35Q8NFH5 326 aa9.27□□□□□ -0.93
DDB1-224ENST00000545894 OSR1Q8TAX0 266 aaPredicted RBP9.27□□□□□ -0.93
DDB1-224ENST00000545894 CHRDL1Q9BU40 450 aa9.27□□□□□ -0.93
DDB1-224ENST00000545894 PAXXQ9BUH6 204 aa9.27□□□□□ -0.93
DDB1-224ENST00000545894 SAP30LQ9HAJ7 183 aa9.27□□□□□ -0.93
DDB1-224ENST00000545894 NDUFA4L2Q9NRX3 87 aa9.27□□□□□ -0.93
DDB1-224ENST00000545894 PPIAL4AQ9Y536 164 aa9.27□□□□□ -0.93
DDB1-224ENST00000545894 RP1L1Q8IWN7 2480 aaPredicted RBP9.27□□□□□ -0.93
DDB1-224ENST00000545894 NDUFB8O95169 186 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 PYYP10082 97 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 GDF5OSQ5U4N7 250 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 ASPHD1Q5U4P2 390 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 C10orf113Q5VZT2 155 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 C22orf34Q6ZV56 151 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 ATOH7Q8N100 152 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 NUDT10Q8NFP7 164 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 OR1L4Q8NGR5 311 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 NUDT11Q96G61 164 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 CCL13Q99616 98 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 ZNRD1Q9P1U0 126 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 IGLV3-9A0A075B6K5 115 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 FAM181BA6NEQ2 426 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 C16orf97H3BN30 126 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 APOA2P02652 100 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 LCN12Q6JVE5 192 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 ZNF788Q6ZQV5 615 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 ZNF833PQ6ZTB9 187 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 FAM216BQ8N7L0 139 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 HARBI1Q96MB7 349 aa9.26□□□□□ -0.93
DDB1-224ENST00000545894 MRPS16Q9Y3D3 137 aaKnown RBP9.26□□□□□ -0.93
DDB1-224ENST00000545894 TRAV34A0A0B4J273 112 aa9.25□□□□□ -0.93
DDB1-224ENST00000545894 INS-IGF2F8WCM5 200 aa9.25□□□□□ -0.93
DDB1-224ENST00000545894 C19orf84I3L1E1 186 aa9.25□□□□□ -0.93
DDB1-224ENST00000545894 M0R2Z0 102 aa9.25□□□□□ -0.93
DDB1-224ENST00000545894 TCF21O43680 179 aa9.25□□□□□ -0.93
DDB1-224ENST00000545894 OR2J3O76001 311 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms