RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 VSIRQ9H7M9 311 aa8.83□□□□□ -1
HDAC4-216ENST00000544989 TENM2Q9NT68 2774 aa8.83□□□□□ -1
HDAC4-216ENST00000544989 TRAV2A0A0B4J234 112 aa8.82□□□□□ -1
HDAC4-216ENST00000544989 RBMY1BA6NDE4 496 aaKnown RBP8.82□□□□□ -1
HDAC4-216ENST00000544989 RBMY1EA6NEQ0 496 aaKnown RBP8.82□□□□□ -1
HDAC4-216ENST00000544989 PITX3O75364 302 aa8.82□□□□□ -1
HDAC4-216ENST00000544989 IFNA4P05014 189 aa8.82□□□□□ -1
HDAC4-216ENST00000544989 FABP1P07148 127 aa8.82□□□□□ -1
HDAC4-216ENST00000544989 RBMY1DP0C7P1 496 aaKnown RBP8.82□□□□□ -1
HDAC4-216ENST00000544989 OR10J1P30954 320 aa8.82□□□□□ -1
HDAC4-216ENST00000544989 GPX4P36969 197 aaPredicted RBP8.82□□□□□ -1
HDAC4-216ENST00000544989 RND2P52198 227 aa8.82□□□□□ -1
HDAC4-216ENST00000544989 APOC4P55056 127 aa8.82□□□□□ -1
HDAC4-216ENST00000544989 RAB11AP62491 216 aa8.82□□□□□ -1
HDAC4-216ENST00000544989 PRSS54Q6PEW0 395 aa8.82□□□□□ -1
HDAC4-216ENST00000544989 MUC7Q8TAX7 377 aa8.82□□□□□ -1
HDAC4-216ENST00000544989 Q8WTZ3 238 aa8.82□□□□□ -1
HDAC4-216ENST00000544989 ZFAND3Q9H8U3 227 aa8.82□□□□□ -1
HDAC4-216ENST00000544989 PRR13Q9NZ81 148 aa8.82□□□□□ -1
HDAC4-216ENST00000544989 PFDN2Q9UHV9 154 aa8.82□□□□□ -1
HDAC4-216ENST00000544989 HUWE1Q7Z6Z7 4374 aaKnown RBP8.82□□□□□ -1
HDAC4-216ENST00000544989 UBE2CO00762 179 aa8.81□□□□□ -1
HDAC4-216ENST00000544989 IFNA21P01568 189 aa8.81□□□□□ -1
HDAC4-216ENST00000544989 IGKV1-17P01599 117 aa8.81□□□□□ -1
HDAC4-216ENST00000544989 IGLC1P0CG04 106 aa8.81□□□□□ -1
HDAC4-216ENST00000544989 IL7P13232 177 aa8.81□□□□□ -1
HDAC4-216ENST00000544989 CRYBB3P26998 211 aa8.81□□□□□ -1
HDAC4-216ENST00000544989 NUP62P37198 522 aaPredicted RBP8.81□□□□□ -1
HDAC4-216ENST00000544989 TCF24Q7RTU0 167 aa8.81□□□□□ -1
HDAC4-216ENST00000544989 IL17DQ8TAD2 202 aa8.81□□□□□ -1
HDAC4-216ENST00000544989 ZNF414Q96IQ9 312 aa8.81□□□□□ -1
HDAC4-216ENST00000544989 WFDC10AQ9H1F0 79 aa8.81□□□□□ -1
HDAC4-216ENST00000544989 SELENOKQ9Y6D0 94 aa8.81□□□□□ -1
HDAC4-216ENST00000544989 CSMD3Q7Z407 3707 aa8.8□□□□□ -1
HDAC4-216ENST00000544989 KIR2DL5BA0A0G2JN68 375 aa8.8□□□□□ -1
HDAC4-216ENST00000544989 KIR2DL5BA0A0G2JPC4 375 aa8.8□□□□□ -1
HDAC4-216ENST00000544989 C9orf170A2RU37 121 aa8.8□□□□□ -1
HDAC4-216ENST00000544989 DNASE2O00115 360 aaPredicted RBP8.8□□□□□ -1
HDAC4-216ENST00000544989 DFFBO76075 338 aa8.8□□□□□ -1
HDAC4-216ENST00000544989 NXPH3O95157 252 aa8.8□□□□□ -1
HDAC4-216ENST00000544989 LYL1P12980 280 aa8.8□□□□□ -1
HDAC4-216ENST00000544989 AP2S1P53680 142 aaPredicted RBP8.8□□□□□ -1
HDAC4-216ENST00000544989 MLANAQ16655 118 aa8.8□□□□□ -1
HDAC4-216ENST00000544989 TIGITQ495A1 244 aa8.8□□□□□ -1
HDAC4-216ENST00000544989 FAM90A2PQ658T7 463 aa8.8□□□□□ -1
HDAC4-216ENST00000544989 KIR2DL5AQ8N109 375 aa8.8□□□□□ -1
HDAC4-216ENST00000544989 KIR2DL5BQ8NHK3 375 aa8.8□□□□□ -1
HDAC4-216ENST00000544989 S100ZQ8WXG8 99 aa8.8□□□□□ -1
HDAC4-216ENST00000544989 ST8SIA2Q92186 375 aa8.8□□□□□ -1
HDAC4-216ENST00000544989 SLC35E1Q96K37 410 aa8.8□□□□□ -1
HDAC4-216ENST00000544989 SDHCQ99643 169 aaPredicted RBP8.8□□□□□ -1
HDAC4-216ENST00000544989 CCDC32Q9BV29 185 aa8.8□□□□□ -1
HDAC4-216ENST00000544989 HELTA6NFD8 242 aa8.79□□□□□ -1
HDAC4-216ENST00000544989 SYNGR2O43760 224 aa8.79□□□□□ -1
HDAC4-216ENST00000544989 TOMM40O96008 361 aa8.79□□□□□ -1
HDAC4-216ENST00000544989 HNRNPCP07910 306 aaKnown RBP eCLIP8.79□□□□□ -16e-11■■□□□ 13.6
HDAC4-216ENST00000544989 HOXB5P09067 269 aa8.79□□□□□ -1
HDAC4-216ENST00000544989 OR4E1P0C645 316 aa8.79□□□□□ -1
HDAC4-216ENST00000544989 RD3LP0DJH9 198 aa8.79□□□□□ -1
HDAC4-216ENST00000544989 RPL11P62913 178 aaKnown RBP8.79□□□□□ -1
HDAC4-216ENST00000544989 DHRS2Q13268 280 aa8.79□□□□□ -1
HDAC4-216ENST00000544989 ODF3L2Q3SX64 289 aa8.79□□□□□ -1
HDAC4-216ENST00000544989 C4orf46Q504U0 113 aa8.79□□□□□ -1
HDAC4-216ENST00000544989 GGNBP1Q5YKI7 109 aa8.79□□□□□ -1
HDAC4-216ENST00000544989 LYG2Q86SG7 212 aa8.79□□□□□ -1
HDAC4-216ENST00000544989 TMEM170AQ8WVE7 144 aa8.79□□□□□ -1
HDAC4-216ENST00000544989 NPIPB3Q92617 1050 aa8.79□□□□□ -1
HDAC4-216ENST00000544989 ACY3Q96HD9 319 aa8.79□□□□□ -1
HDAC4-216ENST00000544989 MRPL36Q9P0J6 103 aaKnown RBP8.79□□□□□ -1
HDAC4-216ENST00000544989 TP53TG1Q9Y2A0 90 aa8.79□□□□□ -1
HDAC4-216ENST00000544989 IGHV3-49A0A0A0MS15 119 aa8.78□□□□□ -1
HDAC4-216ENST00000544989 LINC00854A0A1B0GVQ3 168 aa8.78□□□□□ -1
HDAC4-216ENST00000544989 WRBO00258 174 aa8.78□□□□□ -1
HDAC4-216ENST00000544989 LYRM1O43325 122 aa8.78□□□□□ -1
HDAC4-216ENST00000544989 P2RY1P47900 373 aa8.78□□□□□ -1
HDAC4-216ENST00000544989 Q6ZWC4 215 aa8.78□□□□□ -1
HDAC4-216ENST00000544989 STPG3Q8N7X2 389 aa8.78□□□□□ -1
HDAC4-216ENST00000544989 MS4A6AQ9H2W1 248 aa8.78□□□□□ -1
HDAC4-216ENST00000544989 EDA2RQ9HAV5 297 aa8.78□□□□□ -1
HDAC4-216ENST00000544989 UBQLN2Q9UHD9 624 aa8.78□□□□□ -1
HDAC4-216ENST00000544989 IGHV3OR16-13A0A075B7E8 117 aa8.77□□□□□ -1.01
HDAC4-216ENST00000544989 IGHV3-74A0A0B4J1X5 117 aa8.77□□□□□ -1.01
HDAC4-216ENST00000544989 ZFP92A6NM28 416 aa8.77□□□□□ -1.01
HDAC4-216ENST00000544989 CFDP00746 253 aaPredicted RBP8.77□□□□□ -1.01
HDAC4-216ENST00000544989 IL4P05112 153 aa8.77□□□□□ -1.01
HDAC4-216ENST00000544989 S100A7P31151 101 aa8.77□□□□□ -1.01
HDAC4-216ENST00000544989 BTCP35070 178 aa8.77□□□□□ -1.01
HDAC4-216ENST00000544989 OR8G2PQ6IF36 304 aa8.77□□□□□ -1.01
HDAC4-216ENST00000544989 OR51G1Q8NGK1 321 aa8.77□□□□□ -1.01
HDAC4-216ENST00000544989 RABAC1Q9UI14 185 aa8.77□□□□□ -1.01
HDAC4-216ENST00000544989 PAIP2BQ9ULR5 123 aaKnown RBP8.77□□□□□ -1.01
HDAC4-216ENST00000544989 FLVCR2Q9UPI3 526 aa8.77□□□□□ -1.01
HDAC4-216ENST00000544989 STRAPQ9Y3F4 350 aaKnown RBP8.77□□□□□ -1.01
HDAC4-216ENST00000544989 U3KQE9 123 aa8.77□□□□□ -1.01
HDAC4-216ENST00000544989 IGKV3-7A0A075B6H7 116 aa8.76□□□□□ -1.01
HDAC4-216ENST00000544989 APOHP02749 345 aaPredicted RBP8.76□□□□□ -1.01
HDAC4-216ENST00000544989 IAPPP10997 89 aa8.76□□□□□ -1.01
HDAC4-216ENST00000544989 NKX2-1P43699 371 aaPredicted RBP8.76□□□□□ -1.01
HDAC4-216ENST00000544989 TFPI2P48307 235 aa8.76□□□□□ -1.01
HDAC4-216ENST00000544989 ID3Q02535 119 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms