RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 YPEL3P61236 119 aaPredicted RBP10.01□□□□□ -0.81
SEMA4D-224ENST00000544513 C2orf83Q53S99 150 aa10.01□□□□□ -0.81
SEMA4D-224ENST00000544513 RNASE12Q5GAN4 147 aaKnown RBP10.01□□□□□ -0.81
SEMA4D-224ENST00000544513 MZT2AQ6P582 158 aa10.01□□□□□ -0.81
SEMA4D-224ENST00000544513 TMEM229BQ8NBD8 167 aa10.01□□□□□ -0.81
SEMA4D-224ENST00000544513 OR1S2Q8NGQ3 325 aa10.01□□□□□ -0.81
SEMA4D-224ENST00000544513 LHFPL5Q8TAF8 219 aa10.01□□□□□ -0.81
SEMA4D-224ENST00000544513 GLYATL2Q8WU03 294 aa10.01□□□□□ -0.81
SEMA4D-224ENST00000544513 TMEM170AQ8WVE7 144 aa10.01□□□□□ -0.81
SEMA4D-224ENST00000544513 NARS2Q96I59 477 aaKnown RBP10.01□□□□□ -0.81
SEMA4D-224ENST00000544513 RAB40CQ96S21 281 aa10.01□□□□□ -0.81
SEMA4D-224ENST00000544513 RTBDNQ9BSG5 229 aaPredicted RBP10.01□□□□□ -0.81
SEMA4D-224ENST00000544513 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.01□□□□□ -0.81
SEMA4D-224ENST00000544513 TBC1D24Q9ULP9 559 aa10.01□□□□□ -0.81
SEMA4D-224ENST00000544513 IGHV4-4A0A075B6R2 117 aa10□□□□□ -0.81
SEMA4D-224ENST00000544513 RPS10-NUDT3A0A1W2PQS6 291 aa10□□□□□ -0.81
SEMA4D-224ENST00000544513 FAM25AB3EWG3 89 aa10□□□□□ -0.81
SEMA4D-224ENST00000544513 FAM25CB3EWG5 89 aa10□□□□□ -0.81
SEMA4D-224ENST00000544513 FAM25GB3EWG6 89 aa10□□□□□ -0.81
SEMA4D-224ENST00000544513 SLC25A4P12235 298 aa10□□□□□ -0.81
SEMA4D-224ENST00000544513 EIF2B2P49770 351 aaKnown RBP10□□□□□ -0.81
SEMA4D-224ENST00000544513 AP2S1P53680 142 aaPredicted RBP10□□□□□ -0.81
SEMA4D-224ENST00000544513 DHRS2Q13268 280 aa10□□□□□ -0.81
SEMA4D-224ENST00000544513 CTF1Q16619 201 aa10□□□□□ -0.81
SEMA4D-224ENST00000544513 MARCH1Q8TCQ1 289 aa10□□□□□ -0.81
SEMA4D-224ENST00000544513 RNASEH2CQ8TDP1 164 aaKnown RBP10□□□□□ -0.81
SEMA4D-224ENST00000544513 RNF126Q9BV68 326 aa10□□□□□ -0.81
SEMA4D-224ENST00000544513 SEPSECSQ9HD40 501 aaKnown RBP10□□□□□ -0.81
SEMA4D-224ENST00000544513 CLEC5AQ9NY25 188 aa10□□□□□ -0.81
SEMA4D-224ENST00000544513 FAM90A26D6RGX4 464 aa9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 RAB3DO95716 219 aa9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 HNRNPCP07910 306 aaKnown RBP eCLIP9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 ZNF182P17025 639 aaPredicted RBP9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 OR10J1P30954 320 aa9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 RND2P52198 227 aa9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 TAS2R19P59542 299 aa9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 DHODHQ02127 395 aa9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 C12orf74Q32Q52 190 aa9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 PSMG4Q5JS54 123 aa9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 SELENOHQ8IZQ5 122 aaKnown RBP9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 Q8WTZ3 238 aa9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 C15orf40Q8WUR7 153 aa9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 AP3S1Q92572 193 aa9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 RBPMSQ93062 196 aaKnown RBP9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 HEYLQ9NQ87 328 aaPredicted RBP9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 EXTL2Q9UBQ6 330 aa9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 CELA1Q9UNI1 258 aa9.99□□□□□ -0.81
SEMA4D-224ENST00000544513 TEX13DA0A0J9YY54 714 aaPredicted RBP9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 BUB3O43684 328 aa9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 NXPH3O95157 252 aa9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 GABARAPO95166 117 aa9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 AMBPP02760 352 aa9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 OR5AC1P0C628 307 aa9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 SSBP1Q04837 148 aaKnown RBP9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 SURF2Q15527 256 aaPredicted RBP9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 USF2Q15853 346 aaPredicted RBP9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 SCGB2B2Q4G0G5 96 aa9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 STEAP1BQ6NZ63 245 aa9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 RNASE11Q8TAA1 199 aaKnown RBP9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 GPR146Q96CH1 333 aa9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 NAA50Q9GZZ1 169 aaKnown RBP9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 NAA60Q9H7X0 242 aa9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 CACNG5Q9UF02 275 aa9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 TMEM56-RWDD3S4R434 201 aa9.98□□□□□ -0.81
SEMA4D-224ENST00000544513 A0A1B0GVY2 172 aa9.97□□□□□ -0.81
SEMA4D-224ENST00000544513 H3BMM0 161 aa9.97□□□□□ -0.81
SEMA4D-224ENST00000544513 GABARAPH6UMI1 98 aa9.97□□□□□ -0.81
SEMA4D-224ENST00000544513 SNRPD3P62318 126 aaKnown RBP9.97□□□□□ -0.81
SEMA4D-224ENST00000544513 NMSQ5H8A3 153 aa9.97□□□□□ -0.81
SEMA4D-224ENST00000544513 LINC00336Q6ZUF6 198 aa9.97□□□□□ -0.81
SEMA4D-224ENST00000544513 SLC24A4Q8NFF2 622 aa9.97□□□□□ -0.81
SEMA4D-224ENST00000544513 C1QTNF4Q9BXJ3 329 aa9.97□□□□□ -0.81
SEMA4D-224ENST00000544513 MIXL1Q9H2W2 232 aa9.97□□□□□ -0.81
SEMA4D-224ENST00000544513 NRN1Q9NPD7 142 aa9.97□□□□□ -0.81
SEMA4D-224ENST00000544513 DEFB131BA0A096LNP1 70 aa9.96□□□□□ -0.82
SEMA4D-224ENST00000544513 CRYM-AS1A6NIL9 109 aa9.96□□□□□ -0.82
SEMA4D-224ENST00000544513 TOMM40O96008 361 aa9.96□□□□□ -0.82
SEMA4D-224ENST00000544513 IL4P05112 153 aa9.96□□□□□ -0.82
SEMA4D-224ENST00000544513 NUTF2P61970 127 aaKnown RBP9.96□□□□□ -0.82
SEMA4D-224ENST00000544513 MEF2DQ14814 521 aa9.96□□□□□ -0.82
SEMA4D-224ENST00000544513 GPR107Q5VW38 600 aa9.96□□□□□ -0.82
SEMA4D-224ENST00000544513 FAAP20Q6NZ36 180 aa9.96□□□□□ -0.82
SEMA4D-224ENST00000544513 ZNF705AQ6ZN79 300 aaPredicted RBP9.96□□□□□ -0.82
SEMA4D-224ENST00000544513 NPIPB3Q92617 1050 aa9.96□□□□□ -0.82
SEMA4D-224ENST00000544513 CACFD1Q9UGQ2 172 aa9.96□□□□□ -0.82
SEMA4D-224ENST00000544513 GPR132Q9UNW8 380 aa9.96□□□□□ -0.82
SEMA4D-224ENST00000544513 C14orf166Q9Y224 244 aaKnown RBP9.96□□□□□ -0.82
SEMA4D-224ENST00000544513 CEBPZOSA8MTT3 80 aa9.95□□□□□ -0.82
SEMA4D-224ENST00000544513 RD3LP0DJH9 198 aa9.95□□□□□ -0.82
SEMA4D-224ENST00000544513 HLA-DRB4P13762 266 aa9.95□□□□□ -0.82
SEMA4D-224ENST00000544513 MRPS10P82664 201 aaKnown RBP9.95□□□□□ -0.82
SEMA4D-224ENST00000544513 TMEM268Q5VZI3 342 aa9.95□□□□□ -0.82
SEMA4D-224ENST00000544513 ETFRF1Q6IPR1 90 aa9.95□□□□□ -0.82
SEMA4D-224ENST00000544513 SIGLEC15Q6ZMC9 328 aa9.95□□□□□ -0.82
SEMA4D-224ENST00000544513 CENPSQ8N2Z9 138 aa9.95□□□□□ -0.82
SEMA4D-224ENST00000544513 POM121L12Q8N7R1 296 aa9.95□□□□□ -0.82
SEMA4D-224ENST00000544513 NEU1Q99519 415 aa9.95□□□□□ -0.82
SEMA4D-224ENST00000544513 SCRT1Q9BWW7 348 aa9.95□□□□□ -0.82
SEMA4D-224ENST00000544513 MRPS26Q9BYN8 205 aaKnown RBP9.95□□□□□ -0.82
SEMA4D-224ENST00000544513 XCL2Q9UBD3 114 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms