RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 IGHV1-69P01742 117 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 EGR2P11161 476 aaPredicted RBP10.8□□□□□ -0.68
HCFC2-202ENST00000544223 PLA2G2AP14555 144 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 ECSCRQ19T08 205 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 BCL6BQ8N143 479 aaPredicted RBP10.8□□□□□ -0.68
HCFC2-202ENST00000544223 OR1P1Q8NH06 330 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 RNASEH2CQ8TDP1 164 aaKnown RBP10.8□□□□□ -0.68
HCFC2-202ENST00000544223 ARPC1AQ92747 370 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 ZNF503Q96F45 646 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 C11orf94C9JXX5 98 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 NDUFS8O00217 210 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 OR5G3P0C626 314 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 FAM106CPP0CH98 169 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 STAG3L2P0CL84 134 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 STAG3L3P0CL85 134 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 PYYP10082 97 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 CTRB1P17538 263 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 CTRB2Q6GPI1 263 aa10.8□□□□□ -0.68
HCFC2-202ENST00000544223 OR7C2O60412 319 aa10.79□□□□□ -0.68
HCFC2-202ENST00000544223 HNF1AP20823 631 aa10.79□□□□□ -0.68
HCFC2-202ENST00000544223 GPX4P36969 197 aaPredicted RBP10.79□□□□□ -0.68
HCFC2-202ENST00000544223 PSMB3P49720 205 aa10.79□□□□□ -0.68
HCFC2-202ENST00000544223 OR1B1Q8NGR6 318 aa10.79□□□□□ -0.68
HCFC2-202ENST00000544223 OR4X1Q8NH49 305 aa10.79□□□□□ -0.68
HCFC2-202ENST00000544223 PIFOQ8TCI5 191 aa10.79□□□□□ -0.68
HCFC2-202ENST00000544223 I3L2K1 104 aa10.79□□□□□ -0.68
HCFC2-202ENST00000544223 TGFAP01135 160 aa10.79□□□□□ -0.68
HCFC2-202ENST00000544223 MAS1LP35410 378 aa10.79□□□□□ -0.68
HCFC2-202ENST00000544223 TIGITQ495A1 244 aa10.79□□□□□ -0.68
HCFC2-202ENST00000544223 CACNG8Q8WXS5 425 aa10.79□□□□□ -0.68
HCFC2-202ENST00000544223 RNF5Q99942 180 aa10.79□□□□□ -0.68
HCFC2-202ENST00000544223 TBL2Q9Y4P3 447 aaKnown RBP10.79□□□□□ -0.68
HCFC2-202ENST00000544223 K7EIM0 57 aa10.78□□□□□ -0.68
HCFC2-202ENST00000544223 RHOBP62745 196 aa10.78□□□□□ -0.68
HCFC2-202ENST00000544223 C9orf152Q5JTZ5 239 aa10.78□□□□□ -0.68
HCFC2-202ENST00000544223 ZNF562Q6V9R5 426 aa10.78□□□□□ -0.68
HCFC2-202ENST00000544223 Q6ZS46 218 aa10.78□□□□□ -0.68
HCFC2-202ENST00000544223 SSX3Q99909 188 aa10.78□□□□□ -0.68
HCFC2-202ENST00000544223 TMUB1Q9BVT8 246 aa10.78□□□□□ -0.68
HCFC2-202ENST00000544223 URGCP-MRPS24S4R325 110 aa10.78□□□□□ -0.68
HCFC2-202ENST00000544223 A0A096LNT2 108 aa10.78□□□□□ -0.68
HCFC2-202ENST00000544223 TCRBV4S1A1TA0A5B7 111 aa10.78□□□□□ -0.68
HCFC2-202ENST00000544223 ATP6V0E1O15342 81 aa10.78□□□□□ -0.68
HCFC2-202ENST00000544223 OR2J3O76001 311 aa10.78□□□□□ -0.68
HCFC2-202ENST00000544223 GCHFRP30047 84 aa10.78□□□□□ -0.68
HCFC2-202ENST00000544223 MS4A10Q96PG2 267 aa10.78□□□□□ -0.68
HCFC2-202ENST00000544223 FANCD2OSQ96PS1 177 aa10.78□□□□□ -0.68
HCFC2-202ENST00000544223 POLR3KQ9Y2Y1 108 aaPredicted RBP10.78□□□□□ -0.68
HCFC2-202ENST00000544223 PSMB11A5LHX3 300 aa10.77□□□□□ -0.69
HCFC2-202ENST00000544223 ATF4P18848 351 aaPredicted RBP10.77□□□□□ -0.69
HCFC2-202ENST00000544223 EBI3Q14213 229 aa10.77□□□□□ -0.69
HCFC2-202ENST00000544223 Q5PR19 223 aa10.77□□□□□ -0.69
HCFC2-202ENST00000544223 ZNF343Q6P1L6 599 aa10.77□□□□□ -0.69
HCFC2-202ENST00000544223 RBMS3Q6XE24 437 aaKnown RBP10.77□□□□□ -0.69
HCFC2-202ENST00000544223 ZNF114Q8NC26 417 aa10.77□□□□□ -0.69
HCFC2-202ENST00000544223 RBM14Q96PK6 669 aaKnown RBP10.77□□□□□ -0.69
HCFC2-202ENST00000544223 FUT9Q9Y231 359 aa10.77□□□□□ -0.69
HCFC2-202ENST00000544223 SCO2A0A1W2PP80 73 aa10.77□□□□□ -0.69
HCFC2-202ENST00000544223 B4DSR2 109 aa10.77□□□□□ -0.69
HCFC2-202ENST00000544223 NDUFB4O95168 129 aa10.77□□□□□ -0.69
HCFC2-202ENST00000544223 GOSR1O95249 250 aa10.77□□□□□ -0.69
HCFC2-202ENST00000544223 CRYGCP07315 174 aa10.77□□□□□ -0.69
HCFC2-202ENST00000544223 RASL11BQ9BPW5 248 aa10.77□□□□□ -0.69
HCFC2-202ENST00000544223 SLC25A2Q9BXI2 301 aa10.77□□□□□ -0.69
HCFC2-202ENST00000544223 PARLQ9H300 379 aa10.77□□□□□ -0.69
HCFC2-202ENST00000544223 ZNF355PQ9NSJ1 428 aa10.77□□□□□ -0.69
HCFC2-202ENST00000544223 H3BUX3 64 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 COX7A2P2O60397 106 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 NDUFB8O95169 186 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 CXorf1O96002 111 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 AMY1AP04745 511 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 PSG1P11464 419 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 BRS3P32247 399 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 TAGLN2P37802 199 aaKnown RBP10.76□□□□□ -0.69
HCFC2-202ENST00000544223 LINC00305Q7Z4B0 112 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 SMIM7Q9BQ49 75 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 NIPSNAP3BQ9BS92 247 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 PRELID1Q9Y255 219 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 NIPBLQ6KC79 2804 aaeCLIP10.76□□□□□ -0.69
HCFC2-202ENST00000544223 FNDC10F2Z333 226 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 IFNA1P01562 189 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 CIARTQ8N365 385 aaPredicted RBP10.76□□□□□ -0.69
HCFC2-202ENST00000544223 TMEM116Q8NCL8 245 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 OR5AU1Q8NGC0 362 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 Q96MF0 132 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 DNAJC4Q9NNZ3 241 aa10.76□□□□□ -0.69
HCFC2-202ENST00000544223 OOSP1A8MZH6 123 aa10.75□□□□□ -0.69
HCFC2-202ENST00000544223 LYZP61626 148 aa10.75□□□□□ -0.69
HCFC2-202ENST00000544223 DEFB113Q30KQ7 82 aa10.75□□□□□ -0.69
HCFC2-202ENST00000544223 C10orf113Q5VZT2 155 aa10.75□□□□□ -0.69
HCFC2-202ENST00000544223 OR2T8A6NH00 312 aa10.75□□□□□ -0.69
HCFC2-202ENST00000544223 J3QKU1 62 aa10.75□□□□□ -0.69
HCFC2-202ENST00000544223 IGKV1-17P01599 117 aa10.75□□□□□ -0.69
HCFC2-202ENST00000544223 IGLC1P0CG04 106 aa10.75□□□□□ -0.69
HCFC2-202ENST00000544223 ATP5IP56385 69 aaPredicted RBP10.75□□□□□ -0.69
HCFC2-202ENST00000544223 BLCAPP62952 87 aa10.75□□□□□ -0.69
HCFC2-202ENST00000544223 ADIRFQ15847 76 aa10.75□□□□□ -0.69
HCFC2-202ENST00000544223 PVRIGQ6DKI7 326 aa10.75□□□□□ -0.69
HCFC2-202ENST00000544223 FAM24BQ8N5W8 94 aa10.75□□□□□ -0.69
HCFC2-202ENST00000544223 THAP8Q8NA92 274 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms