RNA–Protein interactions for RNA: ENST00000543654.1

NPIPB4-218, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 4

Gene NPIPB4, Length 513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-218	ENST00000543654	OR4X1	Q8NH49	305 aa		5.21	□□□□□ -1.58
NPIPB4-218	ENST00000543654	LYPD6B	Q8NI32	183 aa		5.21	□□□□□ -1.58
NPIPB4-218	ENST00000543654	PIFO	Q8TCI5	191 aa		5.21	□□□□□ -1.58
NPIPB4-218	ENST00000543654	VN1R17P	Q8TDU5	208 aa		5.21	□□□□□ -1.58
NPIPB4-218	ENST00000543654	SFT2D1	Q8WV19	159 aa		5.21	□□□□□ -1.58
NPIPB4-218	ENST00000543654	NPIPB3	Q92617	1050 aa		5.21	□□□□□ -1.58
NPIPB4-218	ENST00000543654	CXorf58	Q96LI9	332 aa		5.21	□□□□□ -1.58
NPIPB4-218	ENST00000543654	ATP6V0B	Q99437	205 aa		5.21	□□□□□ -1.58
NPIPB4-218	ENST00000543654	TRGV9	Q99603	122 aa		5.21	□□□□□ -1.58
NPIPB4-218	ENST00000543654	MGST2	Q99735	147 aa		5.21	□□□□□ -1.58
NPIPB4-218	ENST00000543654	TXN2	Q99757	166 aa		5.21	□□□□□ -1.58
NPIPB4-218	ENST00000543654	FAM103A1	Q9BTL3	118 aa	Known RBP	5.21	□□□□□ -1.58
NPIPB4-218	ENST00000543654	SMDT1	Q9H4I9	107 aa		5.21	□□□□□ -1.58
NPIPB4-218	ENST00000543654	PRDM13	Q9H4Q3	707 aa		5.21	□□□□□ -1.58
NPIPB4-218	ENST00000543654	SLC39A9	Q9NUM3	307 aa		5.21	□□□□□ -1.58
NPIPB4-218	ENST00000543654	MAP1LC3B2	A6NCE7	125 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	MFSD2B	A6NFX1	497 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	SEC14L6	B5MCN3	397 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	KRBOX1	C9JBD0	128 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654		I3L2K1	104 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	GNG7	O60262	68 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	CLN5	O75503	358 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	BRI3	O95415	125 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	APELA	P0DMC3	54 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	OR10J1	P30954	320 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	FCGR2B	P31994	310 aa	Predicted RBP	5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	MFAP4	P55083	255 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	RPL15	P61313	204 aa	Known RBP	5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	PEA15	Q15121	130 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	KLK9	Q2XQG4	91 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	C9orf152	Q5JTZ5	239 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	CYP2G1P	Q6ZSU1	146 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	SLC7A5P1	Q8MH63	180 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	NECAP1	Q8NC96	275 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	STXBP6	Q8NFX7	210 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	GATAD1	Q8WUU5	269 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	PCNP	Q8WW12	178 aa	Known RBP	5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	MBD3L1	Q8WWY6	194 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	RCC1L	Q96I51	464 aa	Known RBP	5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	HSPB9	Q9BQS6	159 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	MRPL32	Q9BYC8	188 aa	Known RBP	5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	PRSS22	Q9GZN4	317 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	MAP1LC3B	Q9GZQ8	125 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	YAE1D1	Q9NRH1	226 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	RPRM	Q9NS64	109 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	TNFRSF19	Q9NS68	423 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	ZNF355P	Q9NSJ1	428 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	C21orf62	Q9NYP8	219 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	CDC42EP3	Q9UKI2	254 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	KLK9	Q9UKQ9	250 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	SLC45A2	Q9UMX9	530 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	CSMD2	Q7Z408	3487 aa		5.2	□□□□□ -1.58
NPIPB4-218	ENST00000543654	HIVEP2	P31629	2446 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	PDZD2	O15018	2839 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	TRBV7-1	A0A0A6YYK4	115 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654		A0A0G2JLM5	398 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	TMEM89	A2RUT3	159 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654		K7EIM0	57 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	COX7A2P2	O60397	106 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	CXorf1	O96002	111 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	IGHV4-59	P01825	116 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	LINC00869	P0C866	280 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	PSMB3	P49720	205 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	FHIT	P49789	147 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	SLC35B1	P78383	322 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	PMS2P11	Q13670	270 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654		Q56UQ5	140 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	ASPHD1	Q5U4P2	390 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	MIC13	Q5XKP0	118 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	FAM122C	Q6P4D5	195 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	CIART	Q8N365	385 aa	Predicted RBP	5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	RPP25L	Q8N5L8	163 aa	Known RBP	5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	OR2T6	Q8NHC8	308 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	SUN5	Q8TC36	379 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	TMEM190	Q8WZ59	177 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	RAB24	Q969Q5	203 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	EEF1AKMT3	Q96AZ1	226 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	USMG5	Q96IX5	58 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	FAM210A	Q96ND0	272 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	JMJD8	Q96S16	334 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	TXNDC17	Q9BRA2	123 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	FNDC4	Q9H6D8	234 aa	Predicted RBP	5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	SLC25A22	Q9H936	323 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	MANBAL	Q9NQG1	85 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	ARL2-SNX15	V9GYD0	113 aa		5.19	□□□□□ -1.58
NPIPB4-218	ENST00000543654	TRBV9	A0A0B4J1U6	114 aa		5.18	□□□□□ -1.58
NPIPB4-218	ENST00000543654	MDFIC2	A0A1B0GVS7	189 aa		5.18	□□□□□ -1.58
NPIPB4-218	ENST00000543654	ANKRD34B	A5PLL1	514 aa		5.18	□□□□□ -1.58
NPIPB4-218	ENST00000543654	CLDN34	H7C241	214 aa		5.18	□□□□□ -1.58
NPIPB4-218	ENST00000543654		I3L521	148 aa		5.18	□□□□□ -1.58
NPIPB4-218	ENST00000543654	NUPL2	O15504	423 aa	Known RBP	5.18	□□□□□ -1.58
NPIPB4-218	ENST00000543654	HOXA3	O43365	443 aa	Predicted RBP	5.18	□□□□□ -1.58
NPIPB4-218	ENST00000543654	NDUFS6	O75380	124 aa	Known RBP	5.18	□□□□□ -1.58
NPIPB4-218	ENST00000543654	AMY1A	P04745	511 aa		5.18	□□□□□ -1.58
NPIPB4-218	ENST00000543654	IGLC1	P0CG04	106 aa		5.18	□□□□□ -1.58
NPIPB4-218	ENST00000543654	RD3L	P0DJH9	198 aa		5.18	□□□□□ -1.58
NPIPB4-218	ENST00000543654	EGR2	P11161	476 aa	Predicted RBP	5.18	□□□□□ -1.58
NPIPB4-218	ENST00000543654	ZP3	P21754	424 aa		5.18	□□□□□ -1.58
NPIPB4-218	ENST00000543654	MFAP2	P55001	183 aa		5.18	□□□□□ -1.58
NPIPB4-218	ENST00000543654	YPEL3	P61236	119 aa	Predicted RBP	5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms