RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 COMPP49747 757 aaPredicted RBP11.15□□□□□ -0.62
MSH2-206ENST00000543555 ETFRF1Q6IPR1 90 aa11.15□□□□□ -0.62
MSH2-206ENST00000543555 CBLN4Q9NTU7 201 aa11.15□□□□□ -0.62
MSH2-206ENST00000543555 ONECUT1Q9UBC0 465 aa11.15□□□□□ -0.62
MSH2-206ENST00000543555 C22orf46C9J442 243 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 CRYGCP07315 174 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 FABP4P15090 132 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 MFAP2P55001 183 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 COA6Q5JTJ3 125 aaKnown RBP11.14□□□□□ -0.63
MSH2-206ENST00000543555 C10orf113Q5VZT2 155 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 OR5AU1Q8NGC0 362 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 MISP3Q96FF7 219 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 DOPEY1Q5JWR5 2465 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 LY6LH3BQJ8 138 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 BPIFB3P59826 476 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 RPL15P61313 204 aaKnown RBP11.14□□□□□ -0.63
MSH2-206ENST00000543555 SUMO1P63165 101 aaKnown RBP11.14□□□□□ -0.63
MSH2-206ENST00000543555 UBE2L3P68036 154 aaKnown RBP11.14□□□□□ -0.63
MSH2-206ENST00000543555 CENPWQ5EE01 88 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 PATE2Q6UY27 113 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 PPP1R27Q86WC6 154 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 OR1P1Q8NH06 330 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 ZNF355PQ9NSJ1 428 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 POLQO75417 2590 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 MALRD1Q5VYJ5 2156 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 XKRY2A2RUG3 117 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 GNG4P50150 75 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 C11orf71Q6IPW1 123 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 TIMD4Q96H15 378 aa11.14□□□□□ -0.63
MSH2-206ENST00000543555 NBPF19A0A087WUL8 3843 aa11.13□□□□□ -0.63
MSH2-206ENST00000543555 APELAP0DMC3 54 aa11.13□□□□□ -0.63
MSH2-206ENST00000543555 C19orf35Q6ZS72 473 aa11.13□□□□□ -0.63
MSH2-206ENST00000543555 HIST1H2BLQ99880 126 aa11.13□□□□□ -0.63
MSH2-206ENST00000543555 IL36BQ9NZH7 164 aa11.13□□□□□ -0.63
MSH2-206ENST00000543555 RUSC1-AS1Q66K80 236 aa11.13□□□□□ -0.63
MSH2-206ENST00000543555 UBR5O95071 2799 aaPredicted RBP11.12□□□□□ -0.63
MSH2-206ENST00000543555 C19orf84I3L1E1 186 aa11.12□□□□□ -0.63
MSH2-206ENST00000543555 FBXL15Q9H469 300 aa11.12□□□□□ -0.63
MSH2-206ENST00000543555 TNFRSF19Q9NS68 423 aa11.12□□□□□ -0.63
MSH2-206ENST00000543555 TEX22C9J3V5 150 aa11.12□□□□□ -0.63
MSH2-206ENST00000543555 SLC17A3O00476 420 aa11.12□□□□□ -0.63
MSH2-206ENST00000543555 MOSP00540 346 aa11.12□□□□□ -0.63
MSH2-206ENST00000543555 PYYP10082 97 aa11.12□□□□□ -0.63
MSH2-206ENST00000543555 PACRGQ96M98 296 aaPredicted RBP11.12□□□□□ -0.63
MSH2-206ENST00000543555 RNF5Q99942 180 aa11.12□□□□□ -0.63
MSH2-206ENST00000543555 PAXXQ9BUH6 204 aa11.12□□□□□ -0.63
MSH2-206ENST00000543555 USP9YO00507 2555 aaPredicted RBP11.12□□□□□ -0.63
MSH2-206ENST00000543555 CORTO00230 105 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 PDLIM4P50479 330 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 OR5I1Q13606 314 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 LDLRAD2Q5SZI1 272 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 NEU4Q8WWR8 484 aaPredicted RBP11.11□□□□□ -0.63
MSH2-206ENST00000543555 C22orf15Q8WYQ4 148 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 TRAPPC1Q9Y5R8 145 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 F11RQ9Y624 299 aaKnown RBP11.11□□□□□ -0.63
MSH2-206ENST00000543555 NAV3Q8IVL0 2385 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 TRAV9-1A0A075B6T8 112 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 ERVFC1-1P60608 527 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 ARF6P62330 175 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 TPTE2P1Q5T6R2 138 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 TMEM116Q8NCL8 245 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 TRGV9Q99603 122 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 PAX2Q02962 417 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 TIGITQ495A1 244 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 LINC00305Q7Z4B0 112 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 SRSF12Q8WXF0 261 aaKnown RBP11.11□□□□□ -0.63
MSH2-206ENST00000543555 V9GYV3 84 aa11.11□□□□□ -0.63
MSH2-206ENST00000543555 DOPEY2Q9Y3R5 2298 aa11.1□□□□□ -0.63
MSH2-206ENST00000543555 TIMM23O14925 209 aa11.1□□□□□ -0.63
MSH2-206ENST00000543555 HTR1DP28221 377 aa11.1□□□□□ -0.63
MSH2-206ENST00000543555 OR11H6Q8NGC7 330 aa11.1□□□□□ -0.63
MSH2-206ENST00000543555 ABCA12Q86UK0 2595 aa11.1□□□□□ -0.63
MSH2-206ENST00000543555 A1L4Q6 167 aa11.1□□□□□ -0.63
MSH2-206ENST00000543555 LINC00587B1AMM8 73 aa11.1□□□□□ -0.63
MSH2-206ENST00000543555 FCN1O00602 326 aa11.1□□□□□ -0.63
MSH2-206ENST00000543555 CNN1P51911 297 aaKnown RBP11.1□□□□□ -0.63
MSH2-206ENST00000543555 CDPF1Q6NVV7 123 aa11.1□□□□□ -0.63
MSH2-206ENST00000543555 ITLN2Q8WWU7 325 aaPredicted RBP11.1□□□□□ -0.63
MSH2-206ENST00000543555 IGF2BP2-AS1Q96M15 143 aa11.1□□□□□ -0.63
MSH2-206ENST00000543555 GCN1Q92616 2671 aaKnown RBP11.1□□□□□ -0.63
MSH2-206ENST00000543555 IGHV3-21A0A0B4J1V1 117 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 AMBPP02760 352 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 ORM2P19652 201 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 LGALS4P56470 323 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 YPEL3P61236 119 aaPredicted RBP11.09□□□□□ -0.63
MSH2-206ENST00000543555 PLGLAQ15195 96 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 SSX2Q16385 188 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 FXYD5Q96DB9 178 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 PERPQ96FX8 193 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 SSBP3Q9BWW4 388 aaPredicted RBP11.09□□□□□ -0.63
MSH2-206ENST00000543555 DPM3Q9P2X0 92 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 DMRT1Q9Y5R6 373 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 GCGP01275 180 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 IGLV2-8P01709 118 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 RPEL1Q2QD12 228 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 OR1B1Q8NGR6 318 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 MED13LQ71F56 2210 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 LOC105371242A0A075B767 164 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 M0R1W7 72 aa11.09□□□□□ -0.63
MSH2-206ENST00000543555 OSTCQ9NRP0 149 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms