RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	BAX	Q07812	192 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	CLINT1	Q14677	625 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	ATP6V1F	Q16864	119 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	TIGIT	Q495A1	244 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	FAM106A	Q4KMX7	169 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	HAPLN4	Q86UW8	402 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	TMEM116	Q8NCL8	245 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	ATP6V0B	Q99437	205 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	CHRDL1	Q9BU40	450 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	GGACT	Q9BVM4	153 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	SMIM3	Q9BZL3	60 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	PRSS46	E5RG02	174 aa		7.81	□□□□□ -1.16
CPSF7-221	ENST00000543545		F8W735	103 aa	Predicted RBP	7.81	□□□□□ -1.16
CPSF7-221	ENST00000543545	ARPC5	O15511	151 aa		7.81	□□□□□ -1.16
CPSF7-221	ENST00000543545	TSPAN15	O95858	294 aa		7.81	□□□□□ -1.16
CPSF7-221	ENST00000543545	FABP1	P07148	127 aa		7.81	□□□□□ -1.16
CPSF7-221	ENST00000543545	AP2S1	P53680	142 aa	Predicted RBP	7.81	□□□□□ -1.16
CPSF7-221	ENST00000543545	SYNJ2BP	P57105	145 aa		7.81	□□□□□ -1.16
CPSF7-221	ENST00000543545	OR5C1	Q8NGR4	320 aa		7.81	□□□□□ -1.16
CPSF7-221	ENST00000543545		Q8WTZ3	238 aa		7.81	□□□□□ -1.16
CPSF7-221	ENST00000543545	ST6GAL2	Q96JF0	529 aa		7.81	□□□□□ -1.16
CPSF7-221	ENST00000543545	C20orf24	Q9BUV8	137 aa		7.81	□□□□□ -1.16
CPSF7-221	ENST00000543545	TMEM147	Q9BVK8	224 aa		7.81	□□□□□ -1.16
CPSF7-221	ENST00000543545	NPVF	Q9HCQ7	196 aa		7.81	□□□□□ -1.16
CPSF7-221	ENST00000543545	UQCC1	Q9NVA1	299 aa		7.81	□□□□□ -1.16
CPSF7-221	ENST00000543545	HSPB11	Q9Y547	144 aa		7.81	□□□□□ -1.16
CPSF7-221	ENST00000543545	TET2	Q6N021	2002 aa	Predicted RBP	7.81	□□□□□ -1.16
CPSF7-221	ENST00000543545	UBE2L5P	A0A1B0GUS4	154 aa		7.8	□□□□□ -1.16
CPSF7-221	ENST00000543545	IGLC1	P0CG04	106 aa		7.8	□□□□□ -1.16
CPSF7-221	ENST00000543545	RD3L	P0DJH9	198 aa		7.8	□□□□□ -1.16
CPSF7-221	ENST00000543545	CD33	P20138	364 aa		7.8	□□□□□ -1.16
CPSF7-221	ENST00000543545	ADM	P35318	185 aa		7.8	□□□□□ -1.16
CPSF7-221	ENST00000543545	OR2F1	Q13607	317 aa		7.8	□□□□□ -1.16
CPSF7-221	ENST00000543545	RAB31	Q13636	194 aa		7.8	□□□□□ -1.16
CPSF7-221	ENST00000543545	ZNF600	Q6ZNG1	722 aa		7.8	□□□□□ -1.16
CPSF7-221	ENST00000543545	TMEM144	Q7Z5S9	345 aa		7.8	□□□□□ -1.16
CPSF7-221	ENST00000543545	C1QL4	Q86Z23	238 aa		7.8	□□□□□ -1.16
CPSF7-221	ENST00000543545	TCTE3	Q8IZS6	198 aa		7.8	□□□□□ -1.16
CPSF7-221	ENST00000543545	DLX4	Q92988	240 aa	Predicted RBP	7.8	□□□□□ -1.16
CPSF7-221	ENST00000543545	MFF	Q9GZY8	342 aa		7.8	□□□□□ -1.16
CPSF7-221	ENST00000543545	IGHV3OR16-8	A0A075B7F1	116 aa		7.79	□□□□□ -1.16
CPSF7-221	ENST00000543545	FNDC10	F2Z333	226 aa		7.79	□□□□□ -1.16
CPSF7-221	ENST00000543545	NDUFA4	O00483	81 aa		7.79	□□□□□ -1.16
CPSF7-221	ENST00000543545	OVOL1	O14753	267 aa		7.79	□□□□□ -1.16
CPSF7-221	ENST00000543545	DFFB	O76075	338 aa		7.79	□□□□□ -1.16
CPSF7-221	ENST00000543545	IFNA5	P01569	189 aa		7.79	□□□□□ -1.16
CPSF7-221	ENST00000543545	IGKV1-17	P01599	117 aa		7.79	□□□□□ -1.16
CPSF7-221	ENST00000543545	FHL3	Q13643	280 aa		7.79	□□□□□ -1.16
CPSF7-221	ENST00000543545	KLF5	Q13887	457 aa	Predicted RBP	7.79	□□□□□ -1.16
CPSF7-221	ENST00000543545	TEPP	Q6URK8	271 aa		7.79	□□□□□ -1.16
CPSF7-221	ENST00000543545	GPHB5	Q86YW7	130 aa		7.79	□□□□□ -1.16
CPSF7-221	ENST00000543545	SCGB1C1	Q8TD33	95 aa		7.79	□□□□□ -1.16
CPSF7-221	ENST00000543545	AQP10	Q96PS8	301 aa		7.79	□□□□□ -1.16
CPSF7-221	ENST00000543545	TRGV9	Q99603	122 aa		7.79	□□□□□ -1.16
CPSF7-221	ENST00000543545	TNFSF18	Q9UNG2	199 aa		7.79	□□□□□ -1.16
CPSF7-221	ENST00000543545	PUS1	Q9Y606	427 aa	Known RBP eCLIP	7.79	□□□□□ -1.16
CPSF7-221	ENST00000543545		G3V3Q6	166 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	ZNF207	O43670	478 aa	Known RBP	7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	PFDN1	O60925	122 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	FGF7	P21781	194 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	YPEL3	P61236	119 aa	Predicted RBP	7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	ZNF90	Q03938	601 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	BTNL8	Q6UX41	500 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	TREML4	Q6UXN2	200 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	TOMM20L	Q6UXN7	152 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	LINC00482	Q8N8I6	264 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	ZNF709	Q8N972	641 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	THAP8	Q8NA92	274 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	ATP5S	Q99766	215 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	PBDC1	Q9BVG4	233 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	ELOVL1	Q9BW60	279 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	PEMT	Q9UBM1	199 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	FBXL17	Q9UF56	701 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	UFC1	Q9Y3C8	167 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	STAB1	Q9NY15	2570 aa		7.78	□□□□□ -1.16
CPSF7-221	ENST00000543545	IGKV1D-37	A0A075B6S9	117 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	IGKV1OR2-108	A0A075B7D4	117 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	TOMM40	O96008	361 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	IL4	P05112	153 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	PSG1	P11464	419 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	CAMLG	P49069	296 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	LYZ	P61626	148 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	CD300C	Q08708	224 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	VWC2	Q2TAL6	325 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	ZFP69	Q49AA0	526 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	TM4SF20	Q53R12	229 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	UNQ9165/PRO28630	Q6UXU0	137 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	CYP2G1P	Q6ZSU1	146 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	BPIFC	Q8NFQ6	507 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	OR11H4	Q8NGC9	324 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	OR51G1	Q8NGK1	321 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	OR9G4	Q8NGQ1	327 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	RCC1L	Q96I51	464 aa	Known RBP	7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	GINS3	Q9BRX5	216 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	WFDC1	Q9HC57	220 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	WDR83OS	Q9Y284	106 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	WNK1	Q9H4A3	2382 aa		7.77	□□□□□ -1.17
CPSF7-221	ENST00000543545	BORCS7-ASMT	A0A0B4J1R7	106 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	RNF222	A6NCQ9	220 aa		7.76	□□□□□ -1.17
CPSF7-221	ENST00000543545	HMSD	A8MTL9	139 aa		7.76	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms