RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 YPEL3P61236 119 aaPredicted RBP12.17□□□□□ -0.46
CIT-212ENST00000543239 LINC00322Q6ZN03 302 aaPredicted RBP12.17□□□□□ -0.46
CIT-212ENST00000543239 DEFB125Q8N687 156 aa12.17□□□□□ -0.46
CIT-212ENST00000543239 MITD1Q8WV92 249 aa12.17□□□□□ -0.46
CIT-212ENST00000543239 RNF2Q99496 336 aa12.17□□□□□ -0.46
CIT-212ENST00000543239 TM2D3Q9BRN9 247 aa12.17□□□□□ -0.46
CIT-212ENST00000543239 WDR12Q9GZL7 423 aaKnown RBP12.17□□□□□ -0.46
CIT-212ENST00000543239 ZMAT4Q9H898 229 aa12.17□□□□□ -0.46
CIT-212ENST00000543239 OR4C46A6NHA9 309 aa12.16□□□□□ -0.46
CIT-212ENST00000543239 IAPPP10997 89 aa12.16□□□□□ -0.46
CIT-212ENST00000543239 GPX4P36969 197 aaPredicted RBP12.16□□□□□ -0.46
CIT-212ENST00000543239 RAB11AP62491 216 aa12.16□□□□□ -0.46
CIT-212ENST00000543239 RPP30P78346 268 aaKnown RBP12.16□□□□□ -0.46
CIT-212ENST00000543239 ZNF846Q147U1 533 aa12.16□□□□□ -0.46
CIT-212ENST00000543239 TIGITQ495A1 244 aa12.16□□□□□ -0.46
CIT-212ENST00000543239 WWC2-AS2Q96NR7 200 aa12.16□□□□□ -0.46
CIT-212ENST00000543239 WFDC10AQ9H1F0 79 aa12.16□□□□□ -0.46
CIT-212ENST00000543239 VSIRQ9H7M9 311 aa12.16□□□□□ -0.46
CIT-212ENST00000543239 SRD5A3Q9H8P0 318 aa12.16□□□□□ -0.46
CIT-212ENST00000543239 NUDT15Q9NV35 164 aa12.16□□□□□ -0.46
CIT-212ENST00000543239 NPPCP23582 126 aa12.15□□□□□ -0.46
CIT-212ENST00000543239 ID3Q02535 119 aa12.15□□□□□ -0.46
CIT-212ENST00000543239 ASAH1Q13510 395 aa12.15□□□□□ -0.46
CIT-212ENST00000543239 HAGHQ16775 308 aa12.15□□□□□ -0.46
CIT-212ENST00000543239 MZT2BQ6NZ67 158 aa12.15□□□□□ -0.46
CIT-212ENST00000543239 NPIPB3Q92617 1050 aa12.15□□□□□ -0.46
CIT-212ENST00000543239 ACY3Q96HD9 319 aa12.15□□□□□ -0.46
CIT-212ENST00000543239 RCHY1Q96PM5 261 aa12.15□□□□□ -0.46
CIT-212ENST00000543239 METTL26Q96S19 204 aa12.15□□□□□ -0.46
CIT-212ENST00000543239 FAM110AQ9BQ89 295 aa12.15□□□□□ -0.46
CIT-212ENST00000543239 TMEM231Q9H6L2 316 aa12.15□□□□□ -0.46
CIT-212ENST00000543239 IGHV3-49A0A0A0MS15 119 aa12.14□□□□□ -0.47
CIT-212ENST00000543239 A0A1W2PS18 150 aa12.14□□□□□ -0.47
CIT-212ENST00000543239 MPTX1A8MV57 137 aa12.14□□□□□ -0.47
CIT-212ENST00000543239 CRYBB3P26998 211 aa12.14□□□□□ -0.47
CIT-212ENST00000543239 FAM90A2PQ658T7 463 aa12.14□□□□□ -0.47
CIT-212ENST00000543239 OR4D5Q8NGN0 318 aa12.14□□□□□ -0.47
CIT-212ENST00000543239 Q8WTZ3 238 aa12.14□□□□□ -0.47
CIT-212ENST00000543239 ST8SIA2Q92186 375 aa12.14□□□□□ -0.47
CIT-212ENST00000543239 SLC35E1Q96K37 410 aa12.14□□□□□ -0.47
CIT-212ENST00000543239 SPATA25Q9BR10 227 aa12.14□□□□□ -0.47
CIT-212ENST00000543239 MAGT1Q9H0U3 335 aa12.14□□□□□ -0.47
CIT-212ENST00000543239 TBC1D24Q9ULP9 559 aa12.14□□□□□ -0.47
CIT-212ENST00000543239 TRAV6A0A075B6T7 132 aa12.13□□□□□ -0.47
CIT-212ENST00000543239 IGHV3OR16-13A0A075B7E8 117 aa12.13□□□□□ -0.47
CIT-212ENST00000543239 IGHV3-74A0A0B4J1X5 117 aa12.13□□□□□ -0.47
CIT-212ENST00000543239 FAM240BA0A1B0GVZ2 78 aa12.13□□□□□ -0.47
CIT-212ENST00000543239 WRBO00258 174 aa12.13□□□□□ -0.47
CIT-212ENST00000543239 UPK1BO75841 260 aa12.13□□□□□ -0.47
CIT-212ENST00000543239 TOMM40O96008 361 aa12.13□□□□□ -0.47
CIT-212ENST00000543239 NKX2-1P43699 371 aaPredicted RBP12.13□□□□□ -0.47
CIT-212ENST00000543239 NARS2Q96I59 477 aaKnown RBP12.13□□□□□ -0.47
CIT-212ENST00000543239 RBMY1BA6NDE4 496 aaKnown RBP12.12□□□□□ -0.47
CIT-212ENST00000543239 RBMY1EA6NEQ0 496 aaKnown RBP12.12□□□□□ -0.47
CIT-212ENST00000543239 APOHP02749 345 aaPredicted RBP12.12□□□□□ -0.47
CIT-212ENST00000543239 RBMY1DP0C7P1 496 aaKnown RBP12.12□□□□□ -0.47
CIT-212ENST00000543239 GAMTQ14353 236 aa12.12□□□□□ -0.47
CIT-212ENST00000543239 IAH1Q2TAA2 248 aaPredicted RBP12.12□□□□□ -0.47
CIT-212ENST00000543239 TCF24Q7RTU0 167 aa12.12□□□□□ -0.47
CIT-212ENST00000543239 ZNF431Q8TF32 576 aaPredicted RBP12.12□□□□□ -0.47
CIT-212ENST00000543239 STAB2Q8WWQ8 2551 aa12.11□□□□□ -0.47
CIT-212ENST00000543239 PRSS46E5RG02 174 aa12.11□□□□□ -0.47
CIT-212ENST00000543239 H2AFB2P0C5Z0 115 aa12.11□□□□□ -0.47
CIT-212ENST00000543239 RD3LP0DJH9 198 aa12.11□□□□□ -0.47
CIT-212ENST00000543239 CMC4P56277 68 aaPredicted RBP12.11□□□□□ -0.47
CIT-212ENST00000543239 POLR2GP62487 172 aaKnown RBP eCLIP12.11□□□□□ -0.47
CIT-212ENST00000543239 PAFAH1B2P68402 229 aa12.11□□□□□ -0.47
CIT-212ENST00000543239 ODF3L2Q3SX64 289 aa12.11□□□□□ -0.47
CIT-212ENST00000543239 GRAMD2BQ96HH9 432 aa12.11□□□□□ -0.47
CIT-212ENST00000543239 PAIP2BQ9ULR5 123 aaKnown RBP12.11□□□□□ -0.47
CIT-212ENST00000543239 STRAPQ9Y3F4 350 aaKnown RBP12.11□□□□□ -0.47
CIT-212ENST00000543239 TRAV2A0A0B4J234 112 aa12.1□□□□□ -0.47
CIT-212ENST00000543239 ZFP92A6NM28 416 aa12.1□□□□□ -0.47
CIT-212ENST00000543239 DFFBO76075 338 aa12.1□□□□□ -0.47
CIT-212ENST00000543239 IL4P05112 153 aa12.1□□□□□ -0.47
CIT-212ENST00000543239 FABP1P07148 127 aa12.1□□□□□ -0.47
CIT-212ENST00000543239 HNRNPCP07910 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
CIT-212ENST00000543239 SPANXN5Q5MJ07 72 aa12.1□□□□□ -0.47
CIT-212ENST00000543239 LILRB2Q8N423 598 aa12.1□□□□□ -0.47
CIT-212ENST00000543239 ZBTB8BQ8NAP8 495 aaPredicted RBP12.1□□□□□ -0.47
CIT-212ENST00000543239 OR51G1Q8NGK1 321 aa12.1□□□□□ -0.47
CIT-212ENST00000543239 U3KQE9 123 aa12.1□□□□□ -0.47
CIT-212ENST00000543239 IGKV1D-37A0A075B6S9 117 aa12.09□□□□□ -0.47
CIT-212ENST00000543239 LOC102724200A0A096LPH7 203 aaPredicted RBP12.09□□□□□ -0.47
CIT-212ENST00000543239 IGHV3-66A0A0C4DH42 116 aa12.09□□□□□ -0.47
CIT-212ENST00000543239 H3BP45 60 aa12.09□□□□□ -0.47
CIT-212ENST00000543239 SSSCA1O60232 199 aa12.09□□□□□ -0.47
CIT-212ENST00000543239 PSG1P11464 419 aa12.09□□□□□ -0.47
CIT-212ENST00000543239 P2RY1P47900 373 aa12.09□□□□□ -0.47
CIT-212ENST00000543239 USF2Q15853 346 aaPredicted RBP12.09□□□□□ -0.47
CIT-212ENST00000543239 ENKURQ8TC29 256 aa12.09□□□□□ -0.47
CIT-212ENST00000543239 SMIM8Q96KF7 97 aa12.09□□□□□ -0.47
CIT-212ENST00000543239 CITED4Q96RK1 184 aa12.09□□□□□ -0.47
CIT-212ENST00000543239 RAB40CQ96S21 281 aa12.09□□□□□ -0.47
CIT-212ENST00000543239 SEC22CQ9BRL7 303 aa12.09□□□□□ -0.47
CIT-212ENST00000543239 GGTLC1Q9BX51 225 aa12.09□□□□□ -0.47
CIT-212ENST00000543239 PSENENQ9NZ42 101 aa12.09□□□□□ -0.47
CIT-212ENST00000543239 UBQLN2Q9UHD9 624 aa12.09□□□□□ -0.47
CIT-212ENST00000543239 IGKV3-7A0A075B6H7 116 aa12.08□□□□□ -0.48
CIT-212ENST00000543239 TFPI2P48307 235 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms