RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 BCL7BQ9BQE9 202 aa9.63□□□□□ -0.87
RTN3-212ENST00000543123 RTBDNQ9BSG5 229 aaPredicted RBP9.63□□□□□ -0.87
RTN3-212ENST00000543123 FNDC4Q9H6D8 234 aaPredicted RBP9.63□□□□□ -0.87
RTN3-212ENST00000543123 CCDC59Q9P031 241 aaKnown RBP9.63□□□□□ -0.87
RTN3-212ENST00000543123 KCNIP3Q9Y2W7 256 aa9.63□□□□□ -0.87
RTN3-212ENST00000543123 NOL3O60936 208 aaKnown RBP9.62□□□□□ -0.87
RTN3-212ENST00000543123 IGKV1-17P01599 117 aa9.62□□□□□ -0.87
RTN3-212ENST00000543123 SPP1P10451 314 aa9.62□□□□□ -0.87
RTN3-212ENST00000543123 AP2S1P53680 142 aaPredicted RBP9.62□□□□□ -0.87
RTN3-212ENST00000543123 FAAP20Q6NZ36 180 aa9.62□□□□□ -0.87
RTN3-212ENST00000543123 MORN3Q6PF18 240 aaPredicted RBP9.62□□□□□ -0.87
RTN3-212ENST00000543123 Q6ZRM9 215 aa9.62□□□□□ -0.87
RTN3-212ENST00000543123 LILRB2Q8N423 598 aa9.62□□□□□ -0.87
RTN3-212ENST00000543123 OR4C16Q8NGL9 310 aa9.62□□□□□ -0.87
RTN3-212ENST00000543123 IL22RA2Q969J5 263 aa9.62□□□□□ -0.87
RTN3-212ENST00000543123 RSL24D1Q9UHA3 163 aaKnown RBP9.62□□□□□ -0.87
RTN3-212ENST00000543123 SCP2D1Q9UJQ7 156 aa9.62□□□□□ -0.87
RTN3-212ENST00000543123 K7EQG2 157 aa9.61□□□□□ -0.87
RTN3-212ENST00000543123 CTDSP2O14595 271 aa9.61□□□□□ -0.87
RTN3-212ENST00000543123 GSTZ1O43708 216 aaPredicted RBP9.61□□□□□ -0.87
RTN3-212ENST00000543123 SULT1A3P0DMM9 295 aa9.61□□□□□ -0.87
RTN3-212ENST00000543123 SULT1A4P0DMN0 295 aa9.61□□□□□ -0.87
RTN3-212ENST00000543123 NPY1RP25929 384 aa9.61□□□□□ -0.87
RTN3-212ENST00000543123 OR10J1P30954 320 aa9.61□□□□□ -0.87
RTN3-212ENST00000543123 NUP62P37198 522 aaPredicted RBP9.61□□□□□ -0.87
RTN3-212ENST00000543123 ALDH3B2P48448 385 aa9.61□□□□□ -0.87
RTN3-212ENST00000543123 RND2P52198 227 aa9.61□□□□□ -0.87
RTN3-212ENST00000543123 YPEL3P61236 119 aaPredicted RBP9.61□□□□□ -0.87
RTN3-212ENST00000543123 SPCS2Q15005 226 aa9.61□□□□□ -0.87
RTN3-212ENST00000543123 TIGITQ495A1 244 aa9.61□□□□□ -0.87
RTN3-212ENST00000543123 CLVS1Q8IUQ0 354 aaPredicted RBP9.61□□□□□ -0.87
RTN3-212ENST00000543123 SELENOHQ8IZQ5 122 aaKnown RBP9.61□□□□□ -0.87
RTN3-212ENST00000543123 CENPSQ8N2Z9 138 aa9.61□□□□□ -0.87
RTN3-212ENST00000543123 MRPL36Q9P0J6 103 aaKnown RBP9.61□□□□□ -0.87
RTN3-212ENST00000543123 GPR132Q9UNW8 380 aa9.61□□□□□ -0.87
RTN3-212ENST00000543123 TMEM56-RWDD3S4R434 201 aa9.61□□□□□ -0.87
RTN3-212ENST00000543123 KMT2AQ03164 3969 aa9.6□□□□□ -0.87
RTN3-212ENST00000543123 HNRNPCP07910 306 aaKnown RBP eCLIP9.6□□□□□ -0.873e-6■■■□□ 17
RTN3-212ENST00000543123 ZNF688P0C7X2 276 aa9.6□□□□□ -0.87
RTN3-212ENST00000543123 IGLC1P0CG04 106 aa9.6□□□□□ -0.87
RTN3-212ENST00000543123 ANXA3P12429 323 aa9.6□□□□□ -0.87
RTN3-212ENST00000543123 TMBIM6P55061 237 aa9.6□□□□□ -0.87
RTN3-212ENST00000543123 TCTAP57738 103 aa9.6□□□□□ -0.87
RTN3-212ENST00000543123 SRPXP78539 464 aa9.6□□□□□ -0.87
RTN3-212ENST00000543123 LGALS9CQ6DKI2 356 aa9.6□□□□□ -0.87
RTN3-212ENST00000543123 PRSS54Q6PEW0 395 aa9.6□□□□□ -0.87
RTN3-212ENST00000543123 FAM24BQ8N5W8 94 aa9.6□□□□□ -0.87
RTN3-212ENST00000543123 OR51S1Q8NGJ8 323 aa9.6□□□□□ -0.87
RTN3-212ENST00000543123 LHFPL5Q8TAF8 219 aa9.6□□□□□ -0.87
RTN3-212ENST00000543123 GPR146Q96CH1 333 aa9.6□□□□□ -0.87
RTN3-212ENST00000543123 FBXL17Q9UF56 701 aa9.6□□□□□ -0.87
RTN3-212ENST00000543123 PFDN2Q9UHV9 154 aa9.6□□□□□ -0.87
RTN3-212ENST00000543123 ANKRD20A5PA0PJZ0 165 aa9.59□□□□□ -0.87
RTN3-212ENST00000543123 CCR6P51684 374 aa9.59□□□□□ -0.87
RTN3-212ENST00000543123 ATP5IP56385 69 aaPredicted RBP9.59□□□□□ -0.87
RTN3-212ENST00000543123 NANOS2P60321 138 aaKnown RBP9.59□□□□□ -0.87
RTN3-212ENST00000543123 SNRPD3P62318 126 aaKnown RBP9.59□□□□□ -0.87
RTN3-212ENST00000543123 DHRS2Q13268 280 aa9.59□□□□□ -0.87
RTN3-212ENST00000543123 MLANAQ16655 118 aa9.59□□□□□ -0.87
RTN3-212ENST00000543123 NMSQ5H8A3 153 aa9.59□□□□□ -0.87
RTN3-212ENST00000543123 TRPT1Q86TN4 253 aaKnown RBP9.59□□□□□ -0.87
RTN3-212ENST00000543123 C2CD4CQ8TF44 421 aa9.59□□□□□ -0.87
RTN3-212ENST00000543123 HRH4Q9H3N8 390 aa9.59□□□□□ -0.87
RTN3-212ENST00000543123 MCUBQ9NWR8 336 aa9.59□□□□□ -0.87
RTN3-212ENST00000543123 U3KQ87 197 aa9.59□□□□□ -0.87
RTN3-212ENST00000543123 A0A0B4J2A0 478 aa9.58□□□□□ -0.88
RTN3-212ENST00000543123 C11orf94C9JXX5 98 aa9.58□□□□□ -0.88
RTN3-212ENST00000543123 IFNA10P01566 189 aa9.58□□□□□ -0.88
RTN3-212ENST00000543123 IL4P05112 153 aa9.58□□□□□ -0.88
RTN3-212ENST00000543123 RD3LP0DJH9 198 aa9.58□□□□□ -0.88
RTN3-212ENST00000543123 MIFP14174 115 aa9.58□□□□□ -0.88
RTN3-212ENST00000543123 FAUP35544 74 aaKnown RBP9.58□□□□□ -0.88
RTN3-212ENST00000543123 NUTF2P61970 127 aaKnown RBP9.58□□□□□ -0.88
RTN3-212ENST00000543123 SMCO1Q147U7 214 aa9.58□□□□□ -0.88
RTN3-212ENST00000543123 DYNC2LI1Q8TCX1 351 aa9.58□□□□□ -0.88
RTN3-212ENST00000543123 DCANP1Q8TF63 244 aa9.58□□□□□ -0.88
RTN3-212ENST00000543123 GLMPQ8WWB7 406 aa9.58□□□□□ -0.88
RTN3-212ENST00000543123 ACY3Q96HD9 319 aa9.58□□□□□ -0.88
RTN3-212ENST00000543123 SEPSECSQ9HD40 501 aaKnown RBP9.58□□□□□ -0.88
RTN3-212ENST00000543123 SHPKQ9UHJ6 478 aa9.58□□□□□ -0.88
RTN3-212ENST00000543123 U3KQE9 123 aa9.58□□□□□ -0.88
RTN3-212ENST00000543123 TOMM40O96008 361 aa9.57□□□□□ -0.88
RTN3-212ENST00000543123 FABP1P07148 127 aa9.57□□□□□ -0.88
RTN3-212ENST00000543123 AP3S2P59780 193 aa9.57□□□□□ -0.88
RTN3-212ENST00000543123 PSMG4Q5JS54 123 aa9.57□□□□□ -0.88
RTN3-212ENST00000543123 ACTL10Q5JWF8 245 aa9.57□□□□□ -0.88
RTN3-212ENST00000543123 C16orf54Q6UWD8 224 aa9.57□□□□□ -0.88
RTN3-212ENST00000543123 LGI3Q8N145 548 aa9.57□□□□□ -0.88
RTN3-212ENST00000543123 Q8NAQ8 132 aa9.57□□□□□ -0.88
RTN3-212ENST00000543123 DTD1Q8TEA8 209 aa9.57□□□□□ -0.88
RTN3-212ENST00000543123 NPIPB3Q92617 1050 aa9.57□□□□□ -0.88
RTN3-212ENST00000543123 C1QTNF4Q9BXJ3 329 aa9.57□□□□□ -0.88
RTN3-212ENST00000543123 NRN1Q9NPD7 142 aa9.57□□□□□ -0.88
RTN3-212ENST00000543123 HSPB7Q9UBY9 170 aa9.57□□□□□ -0.88
RTN3-212ENST00000543123 FRAS1Q86XX4 4008 aa9.57□□□□□ -0.88
RTN3-212ENST00000543123 FABP12A6NFH5 140 aa9.56□□□□□ -0.88
RTN3-212ENST00000543123 NXPH3O95157 252 aa9.56□□□□□ -0.88
RTN3-212ENST00000543123 AKR1C4P17516 323 aa9.56□□□□□ -0.88
RTN3-212ENST00000543123 SIGLEC15Q6ZMC9 328 aa9.56□□□□□ -0.88
RTN3-212ENST00000543123 IGHV4-28A0A0C4DH34 117 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms