RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 ADMP35318 185 aa9.34□□□□□ -0.91
DDX55-210ENST00000543016 INSL3P51460 131 aa9.34□□□□□ -0.91
DDX55-210ENST00000543016 ELLP55199 621 aaPredicted RBP9.34□□□□□ -0.91
DDX55-210ENST00000543016 YPEL3P61236 119 aaPredicted RBP9.34□□□□□ -0.91
DDX55-210ENST00000543016 MLANAQ16655 118 aa9.34□□□□□ -0.91
DDX55-210ENST00000543016 OR8G2PQ6IF36 304 aa9.34□□□□□ -0.91
DDX55-210ENST00000543016 ZNF600Q6ZNG1 722 aa9.34□□□□□ -0.91
DDX55-210ENST00000543016 TMEM144Q7Z5S9 345 aa9.34□□□□□ -0.91
DDX55-210ENST00000543016 CHAC2Q8WUX2 184 aa9.34□□□□□ -0.91
DDX55-210ENST00000543016 NPIPB3Q92617 1050 aa9.34□□□□□ -0.91
DDX55-210ENST00000543016 ACY3Q96HD9 319 aa9.34□□□□□ -0.91
DDX55-210ENST00000543016 DUX3Q96PT4 197 aa9.34□□□□□ -0.91
DDX55-210ENST00000543016 NPVFQ9HCQ7 196 aa9.34□□□□□ -0.91
DDX55-210ENST00000543016 ANK2Q01484 3957 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 IGHV3-48P01763 117 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 OR10J1P30954 320 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 NUP62P37198 522 aaPredicted RBP9.33□□□□□ -0.92
DDX55-210ENST00000543016 SLURP1P55000 103 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 ACOT7LQ6ZUV0 252 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 THAP8Q8NA92 274 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 OR9G4Q8NGQ1 327 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 OR2T35Q8NGX2 323 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 Q8WTZ3 238 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 DLX4Q92988 240 aaPredicted RBP9.33□□□□□ -0.92
DDX55-210ENST00000543016 MARC2Q969Z3 335 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 TRGV9Q99603 122 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 CHRDL1Q9BU40 450 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 SIGLEC8Q9NYZ4 499 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 OR5AC2Q9NZP5 309 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 MBD2Q9UBB5 411 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 ZMAT5Q9UDW3 170 aaKnown RBP9.33□□□□□ -0.92
DDX55-210ENST00000543016 UFC1Q9Y3C8 167 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 NOTCH3Q9UM47 2321 aa9.33□□□□□ -0.92
DDX55-210ENST00000543016 ZFP92A6NM28 416 aa9.32□□□□□ -0.92
DDX55-210ENST00000543016 A8MWP6 167 aa9.32□□□□□ -0.92
DDX55-210ENST00000543016 K7EMT4 169 aa9.32□□□□□ -0.92
DDX55-210ENST00000543016 IGKV1-17P01599 117 aa9.32□□□□□ -0.92
DDX55-210ENST00000543016 SYNJ2BPP57105 145 aa9.32□□□□□ -0.92
DDX55-210ENST00000543016 AKR1C1Q04828 323 aa9.32□□□□□ -0.92
DDX55-210ENST00000543016 SLC38A11Q08AI6 406 aa9.32□□□□□ -0.92
DDX55-210ENST00000543016 RAB31Q13636 194 aa9.32□□□□□ -0.92
DDX55-210ENST00000543016 TMEM190Q8WZ59 177 aa9.32□□□□□ -0.92
DDX55-210ENST00000543016 WDR89Q96FK6 387 aaPredicted RBP9.32□□□□□ -0.92
DDX55-210ENST00000543016 GINS3Q9BRX5 216 aa9.32□□□□□ -0.92
DDX55-210ENST00000543016 MRPL36Q9P0J6 103 aaKnown RBP9.32□□□□□ -0.92
DDX55-210ENST00000543016 TRAV14DV4A0A0A6YYC5 116 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 IGSF23A1L1A6 192 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 CST7O76096 145 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 TOMM40O96008 361 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 RD3LP0DJH9 198 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 RPL12P30050 165 aaKnown RBP9.31□□□□□ -0.92
DDX55-210ENST00000543016 BMI1P35226 326 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 SELENOTP62341 195 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 PRR20EP86478 221 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 PRR20CP86479 221 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 PRR20DP86480 221 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 PRR20BP86481 221 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 PRR20AP86496 221 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 EWSR1Q01844 656 aaKnown RBP eCLIP9.31□□□□□ -0.92
DDX55-210ENST00000543016 VWC2Q2TAL6 325 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 C9orf66Q5T8R8 295 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 TEPPQ6URK8 271 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 HAPLN4Q86UW8 402 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 TMEM147Q9BVK8 224 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 DAZ1Q9NQZ3 744 aaKnown RBP9.31□□□□□ -0.92
DDX55-210ENST00000543016 UQCC1Q9NVA1 299 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 PFDN2Q9UHV9 154 aa9.31□□□□□ -0.92
DDX55-210ENST00000543016 ZNF320A2RRD8 509 aa9.3□□□□□ -0.92
DDX55-210ENST00000543016 SMCO3A2RU48 225 aa9.3□□□□□ -0.92
DDX55-210ENST00000543016 SEC14L6B5MCN3 397 aa9.3□□□□□ -0.92
DDX55-210ENST00000543016 WIPF1O43516 503 aa9.3□□□□□ -0.92
DDX55-210ENST00000543016 MPDU1O75352 247 aa9.3□□□□□ -0.92
DDX55-210ENST00000543016 DFFBO76075 338 aa9.3□□□□□ -0.92
DDX55-210ENST00000543016 YIF1AO95070 293 aa9.3□□□□□ -0.92
DDX55-210ENST00000543016 S100A7P31151 101 aa9.3□□□□□ -0.92
DDX55-210ENST00000543016 ARL16Q0P5N6 197 aa9.3□□□□□ -0.92
DDX55-210ENST00000543016 TIGITQ495A1 244 aa9.3□□□□□ -0.92
DDX55-210ENST00000543016 LILRB2Q8N423 598 aa9.3□□□□□ -0.92
DDX55-210ENST00000543016 TMEM217Q8N7C4 229 aa9.3□□□□□ -0.92
DDX55-210ENST00000543016 INO80EQ8NBZ0 244 aaPredicted RBP9.3□□□□□ -0.92
DDX55-210ENST00000543016 AQP10Q96PS8 301 aa9.3□□□□□ -0.92
DDX55-210ENST00000543016 ZC4H2Q9NQZ6 224 aa9.3□□□□□ -0.92
DDX55-210ENST00000543016 MRPL27Q9P0M9 148 aaKnown RBP9.3□□□□□ -0.92
DDX55-210ENST00000543016 HSPB11Q9Y547 144 aa9.3□□□□□ -0.92
DDX55-210ENST00000543016 MGAM2Q2M2H8 2515 aa9.3□□□□□ -0.92
DDX55-210ENST00000543016 CCNKO75909 580 aa9.29□□□□□ -0.92
DDX55-210ENST00000543016 NHLH2Q02577 135 aa9.29□□□□□ -0.92
DDX55-210ENST00000543016 TOMM20LQ6UXN7 152 aa9.29□□□□□ -0.92
DDX55-210ENST00000543016 ZNF546Q86UE3 836 aa9.29□□□□□ -0.92
DDX55-210ENST00000543016 OR51G1Q8NGK1 321 aa9.29□□□□□ -0.92
DDX55-210ENST00000543016 OR5C1Q8NGR4 320 aa9.29□□□□□ -0.92
DDX55-210ENST00000543016 TECRQ9NZ01 308 aaKnown RBP9.29□□□□□ -0.92
DDX55-210ENST00000543016 LSM4Q9Y4Z0 139 aaKnown RBP9.29□□□□□ -0.92
DDX55-210ENST00000543016 PUS1Q9Y606 427 aaKnown RBP eCLIP9.29□□□□□ -0.92
DDX55-210ENST00000543016 IGKV1D-37A0A075B6S9 117 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 TMEM213A2RRL7 107 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 C2orf70A6NJV1 201 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 CD5P06127 495 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 CSN3P07498 182 aa9.28□□□□□ -0.92
DDX55-210ENST00000543016 C8orf88P0DMB2 117 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms