RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 SNRPD3P62318 126 aaKnown RBP12.62□□□□□ -0.39
PPP1CA-210ENST00000542876 TMEM229BQ8NBD8 167 aa12.62□□□□□ -0.39
PPP1CA-210ENST00000542876 MARCH1Q8TCQ1 289 aa12.62□□□□□ -0.39
PPP1CA-210ENST00000542876 CLEC5AQ9NY25 188 aa12.62□□□□□ -0.39
PPP1CA-210ENST00000542876 C14orf166Q9Y224 244 aaKnown RBP12.62□□□□□ -0.39
PPP1CA-210ENST00000542876 IGHV4-4A0A075B6R2 117 aa12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 TEX13DA0A0J9YY54 714 aaPredicted RBP12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 CDS2O95674 445 aa12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 IGLC1P0CG04 106 aa12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 ZNF182P17025 639 aaPredicted RBP12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 OR10J1P30954 320 aa12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 RND2P52198 227 aa12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 ETFRF1Q6IPR1 90 aa12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 STEAP1BQ6NZ63 245 aa12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 Q6ZRM9 215 aa12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 OR4D10Q8NGI6 311 aa12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 RNASEH2CQ8TDP1 164 aaKnown RBP12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 RAB40CQ96S21 281 aa12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 C1QTNF4Q9BXJ3 329 aa12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 NAA50Q9GZZ1 169 aaKnown RBP12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 TMEM222Q9H0R3 208 aa12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 X6R8D5 127 aa12.61□□□□□ -0.39
PPP1CA-210ENST00000542876 VPS13DQ5THJ4 4388 aa12.6□□□□□ -0.39
PPP1CA-210ENST00000542876 CEBPZOSA8MTT3 80 aa12.6□□□□□ -0.39
PPP1CA-210ENST00000542876 CD74P04233 296 aa12.6□□□□□ -0.39
PPP1CA-210ENST00000542876 OR5AC1P0C628 307 aa12.6□□□□□ -0.39
PPP1CA-210ENST00000542876 YPEL3P61236 119 aaPredicted RBP12.6□□□□□ -0.39
PPP1CA-210ENST00000542876 AARDQ4LEZ3 155 aa12.6□□□□□ -0.39
PPP1CA-210ENST00000542876 C2orf83Q53S99 150 aa12.6□□□□□ -0.39
PPP1CA-210ENST00000542876 PRSS54Q6PEW0 395 aa12.6□□□□□ -0.39
PPP1CA-210ENST00000542876 C16orf54Q6UWD8 224 aa12.6□□□□□ -0.39
PPP1CA-210ENST00000542876 NOXA1Q86UR1 476 aa12.6□□□□□ -0.39
PPP1CA-210ENST00000542876 SLC24A4Q8NFF2 622 aa12.6□□□□□ -0.39
PPP1CA-210ENST00000542876 RBPMSQ93062 196 aaKnown RBP12.6□□□□□ -0.39
PPP1CA-210ENST00000542876 ABHD1Q96SE0 405 aa12.6□□□□□ -0.39
PPP1CA-210ENST00000542876 RNF126Q9BV68 326 aa12.6□□□□□ -0.39
PPP1CA-210ENST00000542876 U3KQE9 123 aa12.6□□□□□ -0.39
PPP1CA-210ENST00000542876 HERC2O95714 4834 aa12.59□□□□□ -0.39
PPP1CA-210ENST00000542876 ELOA3CA0A087WX78 387 aaPredicted RBP12.59□□□□□ -0.39
PPP1CA-210ENST00000542876 GSTZ1O43708 216 aaPredicted RBP12.59□□□□□ -0.39
PPP1CA-210ENST00000542876 GABARAPO95166 117 aa12.59□□□□□ -0.39
PPP1CA-210ENST00000542876 IL4P05112 153 aa12.59□□□□□ -0.39
PPP1CA-210ENST00000542876 DHODHQ02127 395 aa12.59□□□□□ -0.39
PPP1CA-210ENST00000542876 MEF2DQ14814 521 aa12.59□□□□□ -0.39
PPP1CA-210ENST00000542876 CTF1Q16619 201 aa12.59□□□□□ -0.39
PPP1CA-210ENST00000542876 CSNK1G2-AS1Q8NCQ2 148 aa12.59□□□□□ -0.39
PPP1CA-210ENST00000542876 GLMPQ8WWB7 406 aa12.59□□□□□ -0.39
PPP1CA-210ENST00000542876 CACNG5Q9UF02 275 aa12.59□□□□□ -0.39
PPP1CA-210ENST00000542876 CACFD1Q9UGQ2 172 aa12.59□□□□□ -0.39
PPP1CA-210ENST00000542876 NPY1RP25929 384 aa12.58□□□□□ -0.4
PPP1CA-210ENST00000542876 GPR141Q7Z602 305 aa12.58□□□□□ -0.4
PPP1CA-210ENST00000542876 GLYATL2Q8WU03 294 aa12.58□□□□□ -0.4
PPP1CA-210ENST00000542876 NAA60Q9H7X0 242 aa12.58□□□□□ -0.4
PPP1CA-210ENST00000542876 NRN1Q9NPD7 142 aa12.58□□□□□ -0.4
PPP1CA-210ENST00000542876 HECTD4Q9Y4D8 3996 aa12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 DEFB131BA0A096LNP1 70 aa12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 DISC1C4P0D8 188 aa12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 FAM90A26D6RGX4 464 aa12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 GABARAPH6UMI1 98 aa12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 RD3LP0DJH9 198 aa12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 MRPS10P82664 201 aaKnown RBP12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 SSBP1Q04837 148 aaKnown RBP12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 SURF2Q15527 256 aaPredicted RBP12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 USF2Q15853 346 aaPredicted RBP12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 GPR107Q5VW38 600 aa12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 TMEM268Q5VZI3 342 aa12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 SIGLEC15Q6ZMC9 328 aa12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 LINC00336Q6ZUF6 198 aa12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 SELENOHQ8IZQ5 122 aaKnown RBP12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 GPR146Q96CH1 333 aa12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 ACY3Q96HD9 319 aa12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 RBM38Q9H0Z9 239 aaKnown RBP12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 SEPSECSQ9HD40 501 aaKnown RBP12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 XCL2Q9UBD3 114 aa12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 PFDN2Q9UHV9 154 aa12.57□□□□□ -0.4
PPP1CA-210ENST00000542876 RGS5O15539 181 aa12.56□□□□□ -0.4
PPP1CA-210ENST00000542876 NUP62P37198 522 aaPredicted RBP12.56□□□□□ -0.4
PPP1CA-210ENST00000542876 LHFPL5Q8TAF8 219 aa12.56□□□□□ -0.4
PPP1CA-210ENST00000542876 NPIPB3Q92617 1050 aa12.56□□□□□ -0.4
PPP1CA-210ENST00000542876 RTBDNQ9BSG5 229 aaPredicted RBP12.56□□□□□ -0.4
PPP1CA-210ENST00000542876 CELA1Q9UNI1 258 aa12.56□□□□□ -0.4
PPP1CA-210ENST00000542876 AGRNO00468 2067 aa12.55□□□□□ -0.4
PPP1CA-210ENST00000542876 BUB3O43684 328 aa12.55□□□□□ -0.4
PPP1CA-210ENST00000542876 TOMM40O96008 361 aa12.55□□□□□ -0.4
PPP1CA-210ENST00000542876 IFNA10P01566 189 aa12.55□□□□□ -0.4
PPP1CA-210ENST00000542876 AMBPP02760 352 aa12.55□□□□□ -0.4
PPP1CA-210ENST00000542876 P0DMU3 169 aa12.55□□□□□ -0.4
PPP1CA-210ENST00000542876 FAM231AP0DMU4 169 aa12.55□□□□□ -0.4
PPP1CA-210ENST00000542876 FAM231CP0DMU5 169 aa12.55□□□□□ -0.4
PPP1CA-210ENST00000542876 C12orf74Q32Q52 190 aa12.55□□□□□ -0.4
PPP1CA-210ENST00000542876 FAAP20Q6NZ36 180 aa12.55□□□□□ -0.4
PPP1CA-210ENST00000542876 ZNF767PQ75MW2 155 aa12.55□□□□□ -0.4
PPP1CA-210ENST00000542876 NDUFAF3Q9BU61 184 aa12.55□□□□□ -0.4
PPP1CA-210ENST00000542876 H3BMM0 161 aa12.54□□□□□ -0.4
PPP1CA-210ENST00000542876 NXPH3O95157 252 aa12.54□□□□□ -0.4
PPP1CA-210ENST00000542876 SULT1A3P0DMM9 295 aa12.54□□□□□ -0.4
PPP1CA-210ENST00000542876 SULT1A4P0DMN0 295 aa12.54□□□□□ -0.4
PPP1CA-210ENST00000542876 KCNIP3Q9Y2W7 256 aa12.54□□□□□ -0.4
PPP1CA-210ENST00000542876 CRYM-AS1A6NIL9 109 aa12.53□□□□□ -0.4
PPP1CA-210ENST00000542876 AKAIN1P0CW23 69 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 737.4 ms