RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 NUPL2O15504 423 aaKnown RBP8.92□□□□□ -0.98
YBX3-213ENST00000542641 TGOLN2O43493 480 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 GGCTO75223 188 aaKnown RBP8.92□□□□□ -0.98
YBX3-213ENST00000542641 CLN5O75503 358 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 SCGB2A1O75556 95 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 OR2C1O95371 312 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 CTSGP08311 255 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 ZP3P21754 424 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 RPL12P30050 165 aaKnown RBP8.92□□□□□ -0.98
YBX3-213ENST00000542641 S100A11P31949 105 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 NUP62P37198 522 aaPredicted RBP8.92□□□□□ -0.98
YBX3-213ENST00000542641 HBG1P69891 147 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 HBG2P69892 147 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 DLK1P80370 383 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 EWSR1Q01844 656 aaKnown RBP eCLIP8.92□□□□□ -0.98
YBX3-213ENST00000542641 SLC38A11Q08AI6 406 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 RPEL1Q2QD12 228 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 ZNF546Q86UE3 836 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 AKAP14Q86UN6 197 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 HAPLN4Q86UW8 402 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 TMEM116Q8NCL8 245 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 ST6GAL2Q96JF0 529 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 CHRDL1Q9BU40 450 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 GGACTQ9BVM4 153 aa8.92□□□□□ -0.98
YBX3-213ENST00000542641 TRAV30A0A087WSZ9 112 aa8.91□□□□□ -0.98
YBX3-213ENST00000542641 FXYD6-FXYD2A0A087WZ82 144 aa8.91□□□□□ -0.98
YBX3-213ENST00000542641 G3V3Q6 166 aa8.91□□□□□ -0.98
YBX3-213ENST00000542641 TSPAN15O95858 294 aa8.91□□□□□ -0.98
YBX3-213ENST00000542641 OR10J1P30954 320 aa8.91□□□□□ -0.98
YBX3-213ENST00000542641 HOXD3P31249 432 aaPredicted RBP8.91□□□□□ -0.98
YBX3-213ENST00000542641 SLURP1P55000 103 aa8.91□□□□□ -0.98
YBX3-213ENST00000542641 AKR1C1Q04828 323 aa8.91□□□□□ -0.98
YBX3-213ENST00000542641 TNP2Q05952 138 aa8.91□□□□□ -0.98
YBX3-213ENST00000542641 BAXQ07812 192 aa8.91□□□□□ -0.98
YBX3-213ENST00000542641 FHL3Q13643 280 aa8.91□□□□□ -0.98
YBX3-213ENST00000542641 LILRB2Q8N423 598 aa8.91□□□□□ -0.98
YBX3-213ENST00000542641 INO80EQ8NBZ0 244 aaPredicted RBP8.91□□□□□ -0.98
YBX3-213ENST00000542641 OR5C1Q8NGR4 320 aa8.91□□□□□ -0.98
YBX3-213ENST00000542641 IGHV3-35A0A0C4DH35 117 aa8.9□□□□□ -0.98
YBX3-213ENST00000542641 ZFP92A6NM28 416 aa8.9□□□□□ -0.98
YBX3-213ENST00000542641 FNDC10F2Z333 226 aa8.9□□□□□ -0.98
YBX3-213ENST00000542641 IGLC1P0CG04 106 aa8.9□□□□□ -0.98
YBX3-213ENST00000542641 ADMP35318 185 aa8.9□□□□□ -0.98
YBX3-213ENST00000542641 RELQ04864 619 aaPredicted RBP8.9□□□□□ -0.98
YBX3-213ENST00000542641 ATP6V1FQ16864 119 aa8.9□□□□□ -0.98
YBX3-213ENST00000542641 FAM106AQ4KMX7 169 aa8.9□□□□□ -0.98
YBX3-213ENST00000542641 OR1S2Q8NGQ3 325 aa8.9□□□□□ -0.98
YBX3-213ENST00000542641 NPVFQ9HCQ7 196 aa8.9□□□□□ -0.98
YBX3-213ENST00000542641 UQCC1Q9NVA1 299 aa8.9□□□□□ -0.98
YBX3-213ENST00000542641 HSPB11Q9Y547 144 aa8.9□□□□□ -0.98
YBX3-213ENST00000542641 IGKV1-17P01599 117 aa8.89□□□□□ -0.99
YBX3-213ENST00000542641 SYNJ2BPP57105 145 aa8.89□□□□□ -0.99
YBX3-213ENST00000542641 KLF5Q13887 457 aaPredicted RBP8.89□□□□□ -0.99
YBX3-213ENST00000542641 TIGITQ495A1 244 aa8.89□□□□□ -0.99
YBX3-213ENST00000542641 TMEM144Q7Z5S9 345 aa8.89□□□□□ -0.99
YBX3-213ENST00000542641 GPHB5Q86YW7 130 aa8.89□□□□□ -0.99
YBX3-213ENST00000542641 TCTE3Q8IZS6 198 aa8.89□□□□□ -0.99
YBX3-213ENST00000542641 DLX4Q92988 240 aaPredicted RBP8.89□□□□□ -0.99
YBX3-213ENST00000542641 AQP10Q96PS8 301 aa8.89□□□□□ -0.99
YBX3-213ENST00000542641 TMEM147Q9BVK8 224 aa8.89□□□□□ -0.99
YBX3-213ENST00000542641 TNFSF18Q9UNG2 199 aa8.89□□□□□ -0.99
YBX3-213ENST00000542641 IGKV1D-37A0A075B6S9 117 aa8.88□□□□□ -0.99
YBX3-213ENST00000542641 IGKV1OR2-108A0A075B7D4 117 aa8.88□□□□□ -0.99
YBX3-213ENST00000542641 ZNF320A2RRD8 509 aa8.88□□□□□ -0.99
YBX3-213ENST00000542641 NDUFA4O00483 81 aa8.88□□□□□ -0.99
YBX3-213ENST00000542641 ARPC5O15511 151 aa8.88□□□□□ -0.99
YBX3-213ENST00000542641 YIF1AO95070 293 aa8.88□□□□□ -0.99
YBX3-213ENST00000542641 AP2S1P53680 142 aaPredicted RBP8.88□□□□□ -0.99
YBX3-213ENST00000542641 YPEL3P61236 119 aaPredicted RBP8.88□□□□□ -0.99
YBX3-213ENST00000542641 CLINT1Q14677 625 aa8.88□□□□□ -0.99
YBX3-213ENST00000542641 VWC2Q2TAL6 325 aa8.88□□□□□ -0.99
YBX3-213ENST00000542641 TEPPQ6URK8 271 aa8.88□□□□□ -0.99
YBX3-213ENST00000542641 ZNF600Q6ZNG1 722 aa8.88□□□□□ -0.99
YBX3-213ENST00000542641 C1QL4Q86Z23 238 aa8.88□□□□□ -0.99
YBX3-213ENST00000542641 LINC00482Q8N8I6 264 aa8.88□□□□□ -0.99
YBX3-213ENST00000542641 THAP8Q8NA92 274 aa8.88□□□□□ -0.99
YBX3-213ENST00000542641 Q8WTZ3 238 aa8.88□□□□□ -0.99
YBX3-213ENST00000542641 SMIM3Q9BZL3 60 aa8.88□□□□□ -0.99
YBX3-213ENST00000542641 UBE2L5PA0A1B0GUS4 154 aa8.87□□□□□ -0.99
YBX3-213ENST00000542641 RNF222A6NCQ9 220 aa8.87□□□□□ -0.99
YBX3-213ENST00000542641 HMSDA8MTL9 139 aa8.87□□□□□ -0.99
YBX3-213ENST00000542641 FABP1P07148 127 aa8.87□□□□□ -0.99
YBX3-213ENST00000542641 RD3LP0DJH9 198 aa8.87□□□□□ -0.99
YBX3-213ENST00000542641 CD33P20138 364 aa8.87□□□□□ -0.99
YBX3-213ENST00000542641 ZNF90Q03938 601 aa8.87□□□□□ -0.99
YBX3-213ENST00000542641 TOMM20LQ6UXN7 152 aa8.87□□□□□ -0.99
YBX3-213ENST00000542641 OR11H4Q8NGC9 324 aa8.87□□□□□ -0.99
YBX3-213ENST00000542641 TRGV9Q99603 122 aa8.87□□□□□ -0.99
YBX3-213ENST00000542641 ATP5SQ99766 215 aa8.87□□□□□ -0.99
YBX3-213ENST00000542641 MFFQ9GZY8 342 aa8.87□□□□□ -0.99
YBX3-213ENST00000542641 PUS1Q9Y606 427 aaKnown RBP eCLIP8.87□□□□□ -0.99
YBX3-213ENST00000542641 TRRAPQ9Y4A5 3859 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 IGHV3OR16-8A0A075B7F1 116 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 LGALS9O00182 355 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 OVOL1O14753 267 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 DFFBO76075 338 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 TOMM40O96008 361 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 C1QBP02746 253 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 PSG1P11464 419 aa8.86□□□□□ -0.99
YBX3-213ENST00000542641 FGF7P21781 194 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms