RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 PGPEP1LA6NFU8 196 aa13.64□□□□□ -0.23
TMEM50B-210ENST00000542230 NDUFB4O95168 129 aa13.64□□□□□ -0.23
TMEM50B-210ENST00000542230 CRYBA1P05813 215 aa13.64□□□□□ -0.23
TMEM50B-210ENST00000542230 IGHV4-38-2P0DP08 117 aa13.64□□□□□ -0.23
TMEM50B-210ENST00000542230 HIST1H2BAQ96A08 127 aa13.64□□□□□ -0.23
TMEM50B-210ENST00000542230 HSPB9Q9BQS6 159 aa13.64□□□□□ -0.23
TMEM50B-210ENST00000542230 TBL2Q9Y4P3 447 aaKnown RBP13.64□□□□□ -0.23
TMEM50B-210ENST00000542230 TRAV40A0A0B4J280 105 aa13.63□□□□□ -0.23
TMEM50B-210ENST00000542230 OOSP1A8MZH6 123 aa13.63□□□□□ -0.23
TMEM50B-210ENST00000542230 OR7C2O60412 319 aa13.63□□□□□ -0.23
TMEM50B-210ENST00000542230 EGR2P11161 476 aaPredicted RBP13.63□□□□□ -0.23
TMEM50B-210ENST00000542230 ORM2P19652 201 aa13.63□□□□□ -0.23
TMEM50B-210ENST00000542230 Q8N9W7 124 aa13.63□□□□□ -0.23
TMEM50B-210ENST00000542230 TMEM116Q8NCL8 245 aa13.63□□□□□ -0.23
TMEM50B-210ENST00000542230 FAM167A-AS1Q96KT0 104 aa13.63□□□□□ -0.23
TMEM50B-210ENST00000542230 DNAJC4Q9NNZ3 241 aa13.63□□□□□ -0.23
TMEM50B-210ENST00000542230 SCO2A0A1W2PP80 73 aa13.63□□□□□ -0.23
TMEM50B-210ENST00000542230 LINC01548A6NM66 108 aa13.63□□□□□ -0.23
TMEM50B-210ENST00000542230 TMEM250H0YL14 139 aa13.63□□□□□ -0.23
TMEM50B-210ENST00000542230 K7EIM0 57 aa13.63□□□□□ -0.23
TMEM50B-210ENST00000542230 ZNF562Q6V9R5 426 aa13.63□□□□□ -0.23
TMEM50B-210ENST00000542230 TMEM219Q86XT9 240 aa13.63□□□□□ -0.23
TMEM50B-210ENST00000542230 SLC25A2Q9BXI2 301 aa13.63□□□□□ -0.23
TMEM50B-210ENST00000542230 CREBBPQ92793 2442 aa13.62□□□□□ -0.23
TMEM50B-210ENST00000542230 IGHV7-81A0A0B4J1V7 117 aa13.62□□□□□ -0.23
TMEM50B-210ENST00000542230 OR2C1O95371 312 aa13.62□□□□□ -0.23
TMEM50B-210ENST00000542230 PYYP10082 97 aa13.62□□□□□ -0.23
TMEM50B-210ENST00000542230 ADIRFQ15847 76 aa13.62□□□□□ -0.23
TMEM50B-210ENST00000542230 MRPL41Q8IXM3 137 aaKnown RBP13.62□□□□□ -0.23
TMEM50B-210ENST00000542230 OR5T1Q8NG75 326 aa13.62□□□□□ -0.23
TMEM50B-210ENST00000542230 ARPC1AQ92747 370 aa13.62□□□□□ -0.23
TMEM50B-210ENST00000542230 NDUFS8O00217 210 aa13.61□□□□□ -0.23
TMEM50B-210ENST00000542230 AVPP01185 164 aa13.61□□□□□ -0.23
TMEM50B-210ENST00000542230 TRBV20OR9-2A0A075B6H5 130 aa13.61□□□□□ -0.23
TMEM50B-210ENST00000542230 COX7A2P2O60397 106 aa13.61□□□□□ -0.23
TMEM50B-210ENST00000542230 FAM106CPP0CH98 169 aa13.61□□□□□ -0.23
TMEM50B-210ENST00000542230 ZFP82Q8N141 532 aa13.61□□□□□ -0.23
TMEM50B-210ENST00000542230 OR1B1Q8NGR6 318 aa13.61□□□□□ -0.23
TMEM50B-210ENST00000542230 YPEL4Q96NS1 127 aa13.61□□□□□ -0.23
TMEM50B-210ENST00000542230 FANCD2OSQ96PS1 177 aa13.61□□□□□ -0.23
TMEM50B-210ENST00000542230 ZNF355PQ9NSJ1 428 aa13.61□□□□□ -0.23
TMEM50B-210ENST00000542230 A0A0U1RQK1 487 aa13.6□□□□□ -0.23
TMEM50B-210ENST00000542230 RPL23P62829 140 aaKnown RBP13.6□□□□□ -0.23
TMEM50B-210ENST00000542230 TMEM241Q24JQ0 296 aa13.6□□□□□ -0.23
TMEM50B-210ENST00000542230 TIGITQ495A1 244 aa13.6□□□□□ -0.23
TMEM50B-210ENST00000542230 C10orf113Q5VZT2 155 aa13.6□□□□□ -0.23
TMEM50B-210ENST00000542230 LEMD1Q68G75 181 aa13.6□□□□□ -0.23
TMEM50B-210ENST00000542230 ETFRF1Q6IPR1 90 aa13.6□□□□□ -0.23
TMEM50B-210ENST00000542230 TECRQ9NZ01 308 aaKnown RBP13.6□□□□□ -0.23
TMEM50B-210ENST00000542230 IGLC1P0CG04 106 aa13.6□□□□□ -0.23
TMEM50B-210ENST00000542230 CLEC12BQ2HXU8 276 aa13.6□□□□□ -0.23
TMEM50B-210ENST00000542230 RNF212Q495C1 297 aa13.6□□□□□ -0.23
TMEM50B-210ENST00000542230 OR5AU1Q8NGC0 362 aa13.6□□□□□ -0.23
TMEM50B-210ENST00000542230 IGHV1-69DA0A0B4J2H0 117 aa13.59□□□□□ -0.23
TMEM50B-210ENST00000542230 IGHV1-69P01742 117 aa13.59□□□□□ -0.23
TMEM50B-210ENST00000542230 IGHV3-23P01764 117 aa13.59□□□□□ -0.23
TMEM50B-210ENST00000542230 C8orf88P0DMB2 117 aa13.59□□□□□ -0.23
TMEM50B-210ENST00000542230 HIST2H2BCQ6DN03 193 aa13.59□□□□□ -0.23
TMEM50B-210ENST00000542230 LINC00305Q7Z4B0 112 aa13.59□□□□□ -0.23
TMEM50B-210ENST00000542230 C15orf54Q8N8G6 183 aa13.59□□□□□ -0.23
TMEM50B-210ENST00000542230 C7orf69Q9H7B7 122 aa13.59□□□□□ -0.23
TMEM50B-210ENST00000542230 NAT8Q9UHE5 227 aa13.59□□□□□ -0.23
TMEM50B-210ENST00000542230 IGKV1-17P01599 117 aa13.59□□□□□ -0.23
TMEM50B-210ENST00000542230 PSG1P11464 419 aa13.59□□□□□ -0.23
TMEM50B-210ENST00000542230 PIFOQ8TCI5 191 aa13.59□□□□□ -0.23
TMEM50B-210ENST00000542230 TRGV9Q99603 122 aa13.59□□□□□ -0.23
TMEM50B-210ENST00000542230 ITPR2Q14571 2701 aa13.59□□□□□ -0.23
TMEM50B-210ENST00000542230 MSMBP08118 114 aa13.58□□□□□ -0.24
TMEM50B-210ENST00000542230 CXCL1P09341 107 aa13.58□□□□□ -0.24
TMEM50B-210ENST00000542230 HNF1AP20823 631 aa13.58□□□□□ -0.24
TMEM50B-210ENST00000542230 NANPQ8TBE9 248 aa13.58□□□□□ -0.24
TMEM50B-210ENST00000542230 Q8WTZ3 238 aa13.58□□□□□ -0.24
TMEM50B-210ENST00000542230 TUBA4BQ9H853 241 aa13.58□□□□□ -0.24
TMEM50B-210ENST00000542230 HIF1ANQ9NWT6 349 aa13.58□□□□□ -0.24
TMEM50B-210ENST00000542230 GGTLC3B5MD39 225 aa13.58□□□□□ -0.24
TMEM50B-210ENST00000542230 CORTO00230 105 aa13.58□□□□□ -0.24
TMEM50B-210ENST00000542230 PDE6DO43924 150 aa13.58□□□□□ -0.24
TMEM50B-210ENST00000542230 CLN5O75503 358 aa13.58□□□□□ -0.24
TMEM50B-210ENST00000542230 BCL6BQ8N143 479 aaPredicted RBP13.58□□□□□ -0.24
TMEM50B-210ENST00000542230 C2CD4CQ8TF44 421 aa13.58□□□□□ -0.24
TMEM50B-210ENST00000542230 RBM14Q96PK6 669 aaKnown RBP13.58□□□□□ -0.24
TMEM50B-210ENST00000542230 TGIF2-C20orf24A0A0A6YYL0 155 aa13.57□□□□□ -0.24
TMEM50B-210ENST00000542230 BRS3P32247 399 aa13.57□□□□□ -0.24
TMEM50B-210ENST00000542230 SELENOTP62341 195 aa13.57□□□□□ -0.24
TMEM50B-210ENST00000542230 SRSF8Q9BRL6 282 aaKnown RBP13.57□□□□□ -0.24
TMEM50B-210ENST00000542230 A0A087WWC5 75 aa13.57□□□□□ -0.24
TMEM50B-210ENST00000542230 H3BTX0 84 aa13.57□□□□□ -0.24
TMEM50B-210ENST00000542230 ELOBQ15370 118 aa13.57□□□□□ -0.24
TMEM50B-210ENST00000542230 C22orf15Q8WYQ4 148 aa13.57□□□□□ -0.24
TMEM50B-210ENST00000542230 IGLV11-55A0A075B6I3 123 aa13.56□□□□□ -0.24
TMEM50B-210ENST00000542230 G3V318 75 aa13.56□□□□□ -0.24
TMEM50B-210ENST00000542230 NDUFB8O95169 186 aa13.56□□□□□ -0.24
TMEM50B-210ENST00000542230 UBE2L3P68036 154 aaKnown RBP13.56□□□□□ -0.24
TMEM50B-210ENST00000542230 PNRC1Q12796 327 aaPredicted RBP13.56□□□□□ -0.24
TMEM50B-210ENST00000542230 PQLC2Q6ZP29 291 aa13.56□□□□□ -0.24
TMEM50B-210ENST00000542230 C19orf24Q9BVV8 132 aa13.56□□□□□ -0.24
TMEM50B-210ENST00000542230 A0A096LNT2 108 aa13.56□□□□□ -0.24
TMEM50B-210ENST00000542230 F8W735 103 aaPredicted RBP13.56□□□□□ -0.24
TMEM50B-210ENST00000542230 ATP6V0E1O15342 81 aa13.56□□□□□ -0.24
TMEM50B-210ENST00000542230 OR2J3O76001 311 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms