RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 UBL5Q9BZL1 73 aa12.85□□□□□ -0.35
HMGA2-210ENST00000541363 TRGV1A0A0A0MS02 117 aa12.85□□□□□ -0.35
HMGA2-210ENST00000541363 VCYO14598 125 aa12.85□□□□□ -0.35
HMGA2-210ENST00000541363 DSCR8Q96T75 97 aa12.85□□□□□ -0.35
HMGA2-210ENST00000541363 SAP30O75446 220 aa12.84□□□□□ -0.35
HMGA2-210ENST00000541363 IGHG3P01860 377 aa12.84□□□□□ -0.35
HMGA2-210ENST00000541363 F5P12259 2224 aa12.84□□□□□ -0.35
HMGA2-210ENST00000541363 A0A1W2PRE2 83 aa12.84□□□□□ -0.35
HMGA2-210ENST00000541363 TMEM14DPA8MWL7 114 aa12.84□□□□□ -0.35
HMGA2-210ENST00000541363 C9JAW5 83 aa12.84□□□□□ -0.35
HMGA2-210ENST00000541363 NKAPP1Q8N9T2 125 aa12.84□□□□□ -0.35
HMGA2-210ENST00000541363 C12orf77C9JDV5 145 aa12.84□□□□□ -0.35
HMGA2-210ENST00000541363 CD5P06127 495 aa12.84□□□□□ -0.35
HMGA2-210ENST00000541363 IFITM2Q01629 132 aa12.84□□□□□ -0.35
HMGA2-210ENST00000541363 TM2D1Q9BX74 207 aa12.84□□□□□ -0.35
HMGA2-210ENST00000541363 LSM4Q9Y4Z0 139 aaKnown RBP12.84□□□□□ -0.35
HMGA2-210ENST00000541363 KLF17Q5JT82 389 aaPredicted RBP12.84□□□□□ -0.35
HMGA2-210ENST00000541363 IMMP1LQ96LU5 166 aa12.84□□□□□ -0.35
HMGA2-210ENST00000541363 TNFSF13O75888 250 aa12.84□□□□□ -0.35
HMGA2-210ENST00000541363 TIMM21Q9BVV7 248 aa12.84□□□□□ -0.35
HMGA2-210ENST00000541363 CLPSL1A2RUU4 121 aa12.83□□□□□ -0.35
HMGA2-210ENST00000541363 NPIPB5A8MRT5 1133 aa12.83□□□□□ -0.36
HMGA2-210ENST00000541363 MMP23AO75900 390 aa12.83□□□□□ -0.36
HMGA2-210ENST00000541363 LIMS2Q7Z4I7 341 aa12.83□□□□□ -0.36
HMGA2-210ENST00000541363 TRBV5-3A0A0A0MS03 114 aa12.83□□□□□ -0.36
HMGA2-210ENST00000541363 A0A1W2PQF6 199 aa12.83□□□□□ -0.36
HMGA2-210ENST00000541363 IQCF6A8MYZ5 107 aa12.83□□□□□ -0.36
HMGA2-210ENST00000541363 ZNF474Q6S9Z5 364 aaPredicted RBP12.83□□□□□ -0.36
HMGA2-210ENST00000541363 LHBP01229 141 aa12.83□□□□□ -0.36
HMGA2-210ENST00000541363 GUSBP1Q15486 140 aa12.83□□□□□ -0.36
HMGA2-210ENST00000541363 CDCP2Q5VXM1 449 aa12.83□□□□□ -0.36
HMGA2-210ENST00000541363 UCP1P25874 307 aa12.82□□□□□ -0.36
HMGA2-210ENST00000541363 EREGO14944 169 aa12.82□□□□□ -0.36
HMGA2-210ENST00000541363 C5orf47Q569G3 176 aa12.82□□□□□ -0.36
HMGA2-210ENST00000541363 ZNF525Q8N782 197 aa12.82□□□□□ -0.36
HMGA2-210ENST00000541363 GP6Q9HCN6 339 aa12.82□□□□□ -0.36
HMGA2-210ENST00000541363 C1QTNF9P0C862 333 aa12.82□□□□□ -0.36
HMGA2-210ENST00000541363 D6R8Y8 96 aa12.82□□□□□ -0.36
HMGA2-210ENST00000541363 PRIMA1Q86XR5 153 aa12.82□□□□□ -0.36
HMGA2-210ENST00000541363 WFDC6Q9BQY6 131 aa12.82□□□□□ -0.36
HMGA2-210ENST00000541363 COX6A1P12074 109 aa12.82□□□□□ -0.36
HMGA2-210ENST00000541363 LHX2P50458 406 aa12.82□□□□□ -0.36
HMGA2-210ENST00000541363 A0A0G2JMM0 328 aa12.81□□□□□ -0.36
HMGA2-210ENST00000541363 A0A1W2PPB8 328 aa12.81□□□□□ -0.36
HMGA2-210ENST00000541363 KIR3DP1A8MWS1 328 aa12.81□□□□□ -0.36
HMGA2-210ENST00000541363 ZNF561-AS1K7EIQ3 104 aa12.81□□□□□ -0.36
HMGA2-210ENST00000541363 THAP8Q8NA92 274 aa12.81□□□□□ -0.36
HMGA2-210ENST00000541363 WNT2P09544 360 aa12.81□□□□□ -0.36
HMGA2-210ENST00000541363 IFITM3Q01628 133 aa12.81□□□□□ -0.36
HMGA2-210ENST00000541363 RPL35AP18077 110 aaKnown RBP12.81□□□□□ -0.36
HMGA2-210ENST00000541363 PATJQ8NI35 1801 aa12.81□□□□□ -0.36
HMGA2-210ENST00000541363 SAA2-SAA4A0A096LPE2 208 aa12.81□□□□□ -0.36
HMGA2-210ENST00000541363 TRAV25A0A0B4J276 109 aa12.81□□□□□ -0.36
HMGA2-210ENST00000541363 hADV29S1A0JD25 119 aa12.81□□□□□ -0.36
HMGA2-210ENST00000541363 TCRAP04437 139 aa12.81□□□□□ -0.36
HMGA2-210ENST00000541363 SAA2P0DJI9 122 aaPredicted RBP12.81□□□□□ -0.36
HMGA2-210ENST00000541363 ACTL10Q5JWF8 245 aa12.81□□□□□ -0.36
HMGA2-210ENST00000541363 ADAMTSL5Q6ZMM2 481 aa12.81□□□□□ -0.36
HMGA2-210ENST00000541363 PILRAQ9UKJ1 303 aa12.81□□□□□ -0.36
HMGA2-210ENST00000541363 CACNA1IQ9P0X4 2223 aa12.8□□□□□ -0.36
HMGA2-210ENST00000541363 NCOR1P1Q9H4R4 102 aa12.8□□□□□ -0.36
HMGA2-210ENST00000541363 KIR3DS1Q14943 382 aa12.8□□□□□ -0.36
HMGA2-210ENST00000541363 MYO7BQ6PIF6 2116 aa12.8□□□□□ -0.36
HMGA2-210ENST00000541363 CHKB-CPT1BH3BT56 60 aa12.8□□□□□ -0.36
HMGA2-210ENST00000541363 GZMMP51124 257 aa12.8□□□□□ -0.36
HMGA2-210ENST00000541363 SLC25A48Q6ZT89 311 aaKnown RBP12.8□□□□□ -0.36
HMGA2-210ENST00000541363 C1orf159Q96HA4 380 aa12.8□□□□□ -0.36
HMGA2-210ENST00000541363 BHLHA9Q7RTU4 235 aa12.8□□□□□ -0.36
HMGA2-210ENST00000541363 RPRMLQ8N4K4 120 aa12.8□□□□□ -0.36
HMGA2-210ENST00000541363 UBE2CO00762 179 aa12.8□□□□□ -0.36
HMGA2-210ENST00000541363 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.8□□□□□ -0.36
HMGA2-210ENST00000541363 SPSB2Q99619 263 aa12.8□□□□□ -0.36
HMGA2-210ENST00000541363 NAA38Q9BRA0 125 aaKnown RBP12.8□□□□□ -0.36
HMGA2-210ENST00000541363 CSTL1Q9H114 145 aa12.8□□□□□ -0.36
HMGA2-210ENST00000541363 A0A087X0K7 114 aa12.8□□□□□ -0.36
HMGA2-210ENST00000541363 YPEL1O60688 119 aa12.8□□□□□ -0.36
HMGA2-210ENST00000541363 TBX6O95947 436 aaPredicted RBP12.8□□□□□ -0.36
HMGA2-210ENST00000541363 PYYP10082 97 aa12.8□□□□□ -0.36
HMGA2-210ENST00000541363 YPEL2Q96QA6 119 aa12.8□□□□□ -0.36
HMGA2-210ENST00000541363 LRRK1Q38SD2 2015 aa12.79□□□□□ -0.36
HMGA2-210ENST00000541363 IGKV2-40A0A087WW87 121 aaPredicted RBP12.79□□□□□ -0.36
HMGA2-210ENST00000541363 IGKV2D-40P01614 121 aaPredicted RBP12.79□□□□□ -0.36
HMGA2-210ENST00000541363 SCRT1Q9BWW7 348 aa12.79□□□□□ -0.36
HMGA2-210ENST00000541363 IFITM1P13164 125 aa12.79□□□□□ -0.36
HMGA2-210ENST00000541363 Q5BKY6 102 aa12.79□□□□□ -0.36
HMGA2-210ENST00000541363 C18orf12Q96KH6 178 aa12.79□□□□□ -0.36
HMGA2-210ENST00000541363 C1QTNF4Q9BXJ3 329 aa12.79□□□□□ -0.36
HMGA2-210ENST00000541363 NCKAP5O14513 1909 aa12.79□□□□□ -0.36
HMGA2-210ENST00000541363 FOXL2P58012 376 aa12.79□□□□□ -0.36
HMGA2-210ENST00000541363 C1QL4Q86Z23 238 aa12.79□□□□□ -0.36
HMGA2-210ENST00000541363 FAM216BQ8N7L0 139 aa12.79□□□□□ -0.36
HMGA2-210ENST00000541363 SLC25A28Q96A46 364 aa12.79□□□□□ -0.36
HMGA2-210ENST00000541363 PRCDQ00LT1 54 aa12.79□□□□□ -0.36
HMGA2-210ENST00000541363 FAM90A9PA6NNJ1 464 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 IGHV3-53P01767 116 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 DLEC1Q9Y238 1755 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 CECR9P0C854 216 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 EGR2P11161 476 aaPredicted RBP12.78□□□□□ -0.36
HMGA2-210ENST00000541363 OCC1Q8TAD7 63 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 SPANXCQ9NY87 97 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms