RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 C19orf84I3L1E1 186 aa13.82□□□□□ -0.2
SPIDR-227ENST00000541342 OR5G3P0C626 314 aa13.82□□□□□ -0.2
SPIDR-227ENST00000541342 FAM103A1Q9BTL3 118 aaKnown RBP13.82□□□□□ -0.2
SPIDR-227ENST00000541342 OSTCQ9NRP0 149 aa13.82□□□□□ -0.2
SPIDR-227ENST00000541342 UPK2O00526 184 aa13.81□□□□□ -0.2
SPIDR-227ENST00000541342 OR7C2O60412 319 aa13.81□□□□□ -0.2
SPIDR-227ENST00000541342 VAMP8Q9BV40 100 aa13.81□□□□□ -0.2
SPIDR-227ENST00000541342 PLEKHA3Q9HB20 300 aa13.81□□□□□ -0.2
SPIDR-227ENST00000541342 ZNF257Q9Y2Q1 563 aa13.81□□□□□ -0.2
SPIDR-227ENST00000541342 TBL2Q9Y4P3 447 aaKnown RBP13.81□□□□□ -0.2
SPIDR-227ENST00000541342 TEX50A0A1B0GTY4 177 aa13.81□□□□□ -0.2
SPIDR-227ENST00000541342 FSTL3O95633 263 aa13.81□□□□□ -0.2
SPIDR-227ENST00000541342 ADTRPQ96IZ2 230 aa13.81□□□□□ -0.2
SPIDR-227ENST00000541342 TMEM208Q9BTX3 173 aa13.81□□□□□ -0.2
SPIDR-227ENST00000541342 RAB1BQ9H0U4 201 aa13.81□□□□□ -0.2
SPIDR-227ENST00000541342 TECRQ9NZ01 308 aaKnown RBP13.81□□□□□ -0.2
SPIDR-227ENST00000541342 PRNDQ9UKY0 176 aa13.81□□□□□ -0.2
SPIDR-227ENST00000541342 PSMB11A5LHX3 300 aa13.8□□□□□ -0.2
SPIDR-227ENST00000541342 BMPR1BO00238 502 aa13.8□□□□□ -0.2
SPIDR-227ENST00000541342 MRPL52Q86TS9 123 aaKnown RBP13.8□□□□□ -0.2
SPIDR-227ENST00000541342 OR10W1Q8NGF6 305 aa13.8□□□□□ -0.2
SPIDR-227ENST00000541342 SMIM27A0A1W2PRY6 76 aa13.8□□□□□ -0.2
SPIDR-227ENST00000541342 A0A1W2PS18 150 aa13.8□□□□□ -0.2
SPIDR-227ENST00000541342 ISLRO14498 428 aa13.8□□□□□ -0.2
SPIDR-227ENST00000541342 CA1P00915 261 aaPredicted RBP13.8□□□□□ -0.2
SPIDR-227ENST00000541342 BRS3P32247 399 aa13.8□□□□□ -0.2
SPIDR-227ENST00000541342 CYB5R2Q6BCY4 276 aa13.8□□□□□ -0.2
SPIDR-227ENST00000541342 M0QZK8 103 aa13.8□□□□□ -0.2
SPIDR-227ENST00000541342 RPLP1P05386 114 aaKnown RBP13.8□□□□□ -0.2
SPIDR-227ENST00000541342 CTRLP40313 264 aa13.8□□□□□ -0.2
SPIDR-227ENST00000541342 SUMO1P63165 101 aaKnown RBP13.8□□□□□ -0.2
SPIDR-227ENST00000541342 DIAPH2-AS1Q14236 149 aa13.8□□□□□ -0.2
SPIDR-227ENST00000541342 SIGLECL1Q8N7X8 197 aa13.8□□□□□ -0.2
SPIDR-227ENST00000541342 SLC35E1Q96K37 410 aa13.8□□□□□ -0.2
SPIDR-227ENST00000541342 FAM167A-AS1Q96KT0 104 aa13.8□□□□□ -0.2
SPIDR-227ENST00000541342 TMEM68Q96MH6 324 aa13.8□□□□□ -0.2
SPIDR-227ENST00000541342 ASH1LQ9NR48 2969 aaKnown RBP13.8□□□□□ -0.2
SPIDR-227ENST00000541342 RNASE2P10153 161 aaKnown RBP13.79□□□□□ -0.2
SPIDR-227ENST00000541342 ZNF596Q8TC21 504 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 FAM168AQ92567 244 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 LINC00479Q96M42 142 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 SLC25A33Q9BSK2 321 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 MRPL20Q9BYC9 149 aaKnown RBP13.79□□□□□ -0.2
SPIDR-227ENST00000541342 NRN1Q9NPD7 142 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 MALRD1Q5VYJ5 2156 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 COL12A1Q99715 3063 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 IGHV1-8P0DP01 117 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 DLX1P56177 255 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 C2orf83Q53S99 150 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 OR10J3Q5JRS4 329 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 PNKDQ8N490 385 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 NHLRC2Q8NBF2 726 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 KCNS1Q96KK3 526 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 TRAV5A0A0B4J249 113 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 MT-ND6P03923 174 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 KRTDAPP60985 99 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 MRPL54Q6P161 138 aaKnown RBP13.79□□□□□ -0.2
SPIDR-227ENST00000541342 DTX2Q86UW9 622 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 SLC25A2Q9BXI2 301 aa13.79□□□□□ -0.2
SPIDR-227ENST00000541342 SAA1P0DJI8 122 aaPredicted RBP13.78□□□□□ -0.2
SPIDR-227ENST00000541342 REG1BP48304 166 aa13.78□□□□□ -0.2
SPIDR-227ENST00000541342 SSBP2P81877 361 aaPredicted RBP13.78□□□□□ -0.2
SPIDR-227ENST00000541342 TIGITQ495A1 244 aa13.78□□□□□ -0.2
SPIDR-227ENST00000541342 IBA57Q5T440 356 aaKnown RBP13.78□□□□□ -0.2
SPIDR-227ENST00000541342 CDC42EP3Q9UKI2 254 aa13.78□□□□□ -0.2
SPIDR-227ENST00000541342 USP24Q9UPU5 2620 aa13.78□□□□□ -0.2
SPIDR-227ENST00000541342 E7EUB6 86 aa13.78□□□□□ -0.2
SPIDR-227ENST00000541342 WDR73Q6P4I2 378 aa13.78□□□□□ -0.2
SPIDR-227ENST00000541342 SLC35D1Q9NTN3 355 aa13.78□□□□□ -0.2
SPIDR-227ENST00000541342 NPSP0C0P6 89 aa13.77□□□□□ -0.2
SPIDR-227ENST00000541342 SRIP30626 198 aa13.77□□□□□ -0.2
SPIDR-227ENST00000541342 NIT1Q86X76 327 aa13.77□□□□□ -0.2
SPIDR-227ENST00000541342 LINC00311Q8N616 119 aa13.77□□□□□ -0.2
SPIDR-227ENST00000541342 C8orf31Q8N9H6 132 aa13.77□□□□□ -0.2
SPIDR-227ENST00000541342 LPAR2Q9HBW0 351 aa13.77□□□□□ -0.2
SPIDR-227ENST00000541342 A0A1W2PRE2 83 aa13.77□□□□□ -0.21
SPIDR-227ENST00000541342 DIRC3C9JPN6 131 aa13.77□□□□□ -0.21
SPIDR-227ENST00000541342 OR10X1Q8NGY0 326 aa13.77□□□□□ -0.21
SPIDR-227ENST00000541342 DLEU1O43261 78 aa13.77□□□□□ -0.21
SPIDR-227ENST00000541342 AMY1AP04745 511 aa13.77□□□□□ -0.21
SPIDR-227ENST00000541342 AMTP48728 403 aa13.77□□□□□ -0.21
SPIDR-227ENST00000541342 PRB3Q04118 309 aaPredicted RBP13.77□□□□□ -0.21
SPIDR-227ENST00000541342 SLAQ13239 276 aa13.77□□□□□ -0.21
SPIDR-227ENST00000541342 ST6GALNAC6Q969X2 333 aa13.77□□□□□ -0.21
SPIDR-227ENST00000541342 MGST1P10620 155 aaKnown RBP13.76□□□□□ -0.21
SPIDR-227ENST00000541342 PMCHP20382 165 aa13.76□□□□□ -0.21
SPIDR-227ENST00000541342 CD69Q07108 199 aa13.76□□□□□ -0.21
SPIDR-227ENST00000541342 OR1L8Q8NGR8 309 aa13.76□□□□□ -0.21
SPIDR-227ENST00000541342 OR2T6Q8NHC8 308 aa13.76□□□□□ -0.21
SPIDR-227ENST00000541342 RNF2Q99496 336 aa13.76□□□□□ -0.21
SPIDR-227ENST00000541342 ZNF586Q9NXT0 402 aa13.76□□□□□ -0.21
SPIDR-227ENST00000541342 PLXNB1O43157 2135 aa13.76□□□□□ -0.21
SPIDR-227ENST00000541342 H0YJW9 148 aa13.76□□□□□ -0.21
SPIDR-227ENST00000541342 C8orf88P0DMB2 117 aa13.76□□□□□ -0.21
SPIDR-227ENST00000541342 RTL8BQ17RB0 113 aa13.76□□□□□ -0.21
SPIDR-227ENST00000541342 ZNF253O75346 499 aa13.75□□□□□ -0.21
SPIDR-227ENST00000541342 TMEM133Q9H2Q1 129 aa13.75□□□□□ -0.21
SPIDR-227ENST00000541342 BET1LQ9NYM9 111 aa13.75□□□□□ -0.21
SPIDR-227ENST00000541342 VPS13CQ709C8 3753 aa13.75□□□□□ -0.21
SPIDR-227ENST00000541342 ZNF324O75467 553 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms