RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 RPS10-NUDT3A0A1W2PQS6 291 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 A0A1W2PRX2 142 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 OR2T8A6NH00 312 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 PPP5D1E7EU14 171 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 CLEC3BP05452 202 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 CDX1P47902 265 aaPredicted RBP7.21□□□□□ -1.26
DDX55-208ENST00000541259 MFAP4P55083 255 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 HBG1P69891 147 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 HBG2P69892 147 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 Q56UQ5 140 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 ETFRF1Q6IPR1 90 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 ZNF343Q6P1L6 599 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 CLEC19AQ6UXS0 136 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 TMUB2Q71RG4 321 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 LILRB2Q8N423 598 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 C9orf62Q8N4C0 152 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 KCNRGQ8N5I3 272 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 OR4X1Q8NH49 305 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 CACNG8Q8WXS5 425 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 TMEM158Q8WZ71 300 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 SLC35E1Q96K37 410 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 CXorf58Q96LI9 332 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 UBE2E2Q96LR5 201 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 UQCC1Q9NVA1 299 aa7.21□□□□□ -1.26
DDX55-208ENST00000541259 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.2□□□□□ -1.26
DDX55-208ENST00000541259 TRBV7-1A0A0A6YYK4 115 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 A0A0D9SG52 128 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 UBE2L5PA0A1B0GUS4 154 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 I3L521 148 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 CLN5O75503 358 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 CTSGP08311 255 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 GPR183P32249 361 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 AKR1C1Q04828 323 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 OR2F1Q13607 317 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 ZNF345Q14585 488 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 ATP6V1FQ16864 119 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 VWC2Q2TAL6 325 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 DEFB136Q30KP8 78 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 TIGITQ495A1 244 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 RPL7L1Q6DKI1 246 aaKnown RBP7.2□□□□□ -1.26
DDX55-208ENST00000541259 TMEM116Q8NCL8 245 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 ZNF414Q96IQ9 312 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 DUX3Q96PT4 197 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 ATP5SQ99766 215 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 CHRDL1Q9BU40 450 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 TMEM147Q9BVK8 224 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 GGACTQ9BVM4 153 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 ARL6Q9H0F7 186 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 CYTL1Q9NRR1 136 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 TSSC4Q9Y5U2 329 aaPredicted RBP7.2□□□□□ -1.26
DDX55-208ENST00000541259 RFNGQ9Y644 331 aa7.2□□□□□ -1.26
DDX55-208ENST00000541259 IGHV3-35A0A0C4DH35 117 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 NUDT19A8MXV4 375 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 FNDC10F2Z333 226 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 GNG7O60262 68 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 SCAF4O95104 1147 aaKnown RBP7.19□□□□□ -1.26
DDX55-208ENST00000541259 IGKV1-17P01599 117 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 HNRNPCP07910 306 aaKnown RBP eCLIP7.19□□□□□ -1.26
DDX55-208ENST00000541259 LGALS1P09382 135 aaKnown RBP7.19□□□□□ -1.26
DDX55-208ENST00000541259 IGLC1P0CG04 106 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 OR10J1P30954 320 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 FCGR2BP31994 310 aaPredicted RBP7.19□□□□□ -1.26
DDX55-208ENST00000541259 NPBWR1P48145 328 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 ZNF90Q03938 601 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 NSUN5P1Q3KNT7 163 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 TMEM182Q6ZP80 229 aaPredicted RBP7.19□□□□□ -1.26
DDX55-208ENST00000541259 TMEM144Q7Z5S9 345 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 THAP8Q8NA92 274 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 KLHL30-AS1Q8NEE0 82 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 TXN2Q99757 166 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 CITED1Q99966 193 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 NPVFQ9HCQ7 196 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 PEF1Q9UBV8 284 aaKnown RBP7.19□□□□□ -1.26
DDX55-208ENST00000541259 WDR83OSQ9Y284 106 aa7.19□□□□□ -1.26
DDX55-208ENST00000541259 LSM4Q9Y4Z0 139 aaKnown RBP7.19□□□□□ -1.26
DDX55-208ENST00000541259 IGHV4OR15-8A0A075B7B6 117 aa7.18□□□□□ -1.26
DDX55-208ENST00000541259 A0A087WW49 117 aa7.18□□□□□ -1.26
DDX55-208ENST00000541259 BMPR1BO00238 502 aa7.18□□□□□ -1.26
DDX55-208ENST00000541259 TGOLN2O43493 480 aa7.18□□□□□ -1.26
DDX55-208ENST00000541259 BCL2L11O43521 198 aa7.18□□□□□ -1.26
DDX55-208ENST00000541259 FGF7P21781 194 aa7.18□□□□□ -1.26
DDX55-208ENST00000541259 GATA2P23769 480 aaPredicted RBP7.18□□□□□ -1.26
DDX55-208ENST00000541259 ARL3P36405 182 aa7.18□□□□□ -1.26
DDX55-208ENST00000541259 RUNX1Q01196 453 aa7.18□□□□□ -1.26
DDX55-208ENST00000541259 OPCMLQ14982 345 aa7.18□□□□□ -1.26
DDX55-208ENST00000541259 TEPPQ6URK8 271 aa7.18□□□□□ -1.26
DDX55-208ENST00000541259 BTNL8Q6UX41 500 aa7.18□□□□□ -1.26
DDX55-208ENST00000541259 RNF141Q8WVD5 230 aa7.18□□□□□ -1.26
DDX55-208ENST00000541259 C4orf3Q8WVX3 66 aa7.18□□□□□ -1.26
DDX55-208ENST00000541259 MGST2Q99735 147 aa7.18□□□□□ -1.26
DDX55-208ENST00000541259 ARPC5LQ9BPX5 153 aa7.18□□□□□ -1.26
DDX55-208ENST00000541259 WDR61Q9GZS3 305 aaKnown RBP7.18□□□□□ -1.26
DDX55-208ENST00000541259 ANK2Q01484 3957 aa7.17□□□□□ -1.26
DDX55-208ENST00000541259 KANTRA0A1W2PQU2 76 aa7.17□□□□□ -1.26
DDX55-208ENST00000541259 ZFP92A6NM28 416 aa7.17□□□□□ -1.26
DDX55-208ENST00000541259 TAAR5O14804 337 aa7.17□□□□□ -1.26
DDX55-208ENST00000541259 AGPAT2O15120 278 aa7.17□□□□□ -1.26
DDX55-208ENST00000541259 DFFBO76075 338 aa7.17□□□□□ -1.26
DDX55-208ENST00000541259 OR2C1O95371 312 aa7.17□□□□□ -1.26
DDX55-208ENST00000541259 IFNA5P01569 189 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms