RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 TMPRSS5Q9H3S3 457 aa9.85□□□□□ -0.83
SMAD3-204ENST00000540846 CUBNO60494 3623 aa9.85□□□□□ -0.83
SMAD3-204ENST00000540846 INAFM1C9JVW0 142 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 H3BUX3 64 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 TSPAN9O75954 239 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 IGHV4-59P01825 116 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 FAM106CPP0CH98 169 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 APELAP0DMC3 54 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 CTRB1P17538 263 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 IER3P46695 156 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 MEF2BQ02080 365 aaPredicted RBP9.84□□□□□ -0.83
SMAD3-204ENST00000540846 FXYD3Q14802 87 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 CTRB2Q6GPI1 263 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 ZNF562Q6V9R5 426 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 C19orf35Q6ZS72 473 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 CYP2G1PQ6ZSU1 146 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 SUN5Q8TC36 379 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 MISP3Q96FF7 219 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 C19orf24Q9BVV8 132 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 MRPL36Q9P0J6 103 aaKnown RBP9.84□□□□□ -0.83
SMAD3-204ENST00000540846 CDC42EP3Q9UKI2 254 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 DMRT1Q9Y5R6 373 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 IGKV1D-37A0A075B6S9 117 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 TCRBV4S1A1TA0A5B7 111 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 PSMB11A5LHX3 300 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 A6NDX4 124 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 FAM74A7A6NL05 159 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 CXorf1O96002 111 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 SRP14P37108 136 aaKnown RBP9.84□□□□□ -0.83
SMAD3-204ENST00000540846 RND2P52198 227 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 FAM74A3Q4VXF1 159 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 FAM90A2PQ658T7 463 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 TMEM116Q8NCL8 245 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 ABHD5Q8WTS1 349 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 NPIPB3Q92617 1050 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 ARPC1AQ92747 370 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 C1RLQ9NZP8 487 aa9.84□□□□□ -0.83
SMAD3-204ENST00000540846 NF1P21359 2839 aa9.83□□□□□ -0.84
SMAD3-204ENST00000540846 NCBP2LA6PVI3 153 aaKnown RBP9.83□□□□□ -0.84
SMAD3-204ENST00000540846 HLA-DRB1P01911 266 aa9.83□□□□□ -0.84
SMAD3-204ENST00000540846 OR5G3P0C626 314 aa9.83□□□□□ -0.84
SMAD3-204ENST00000540846 ARL14EPLP0DKL9 152 aa9.83□□□□□ -0.84
SMAD3-204ENST00000540846 CD81P60033 236 aa9.83□□□□□ -0.84
SMAD3-204ENST00000540846 SELENOTP62341 195 aa9.83□□□□□ -0.84
SMAD3-204ENST00000540846 CX3CL1P78423 397 aa9.83□□□□□ -0.84
SMAD3-204ENST00000540846 NDPQ00604 133 aa9.83□□□□□ -0.84
SMAD3-204ENST00000540846 SIGLECL1Q8N7X8 197 aa9.83□□□□□ -0.84
SMAD3-204ENST00000540846 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.83□□□□□ -0.84
SMAD3-204ENST00000540846 Q8N9W7 124 aa9.83□□□□□ -0.84
SMAD3-204ENST00000540846 OR1L6Q8NGR2 347 aa9.83□□□□□ -0.84
SMAD3-204ENST00000540846 SEPSECSQ9HD40 501 aaKnown RBP9.83□□□□□ -0.84
SMAD3-204ENST00000540846 NPIPB5A8MRT5 1133 aa9.82□□□□□ -0.84
SMAD3-204ENST00000540846 TMEM250H0YL14 139 aa9.82□□□□□ -0.84
SMAD3-204ENST00000540846 I3L2K1 104 aa9.82□□□□□ -0.84
SMAD3-204ENST00000540846 MT-CO2P00403 227 aa9.82□□□□□ -0.84
SMAD3-204ENST00000540846 IGHV3-48P01763 117 aa9.82□□□□□ -0.84
SMAD3-204ENST00000540846 AMY1AP04745 511 aa9.82□□□□□ -0.84
SMAD3-204ENST00000540846 RHEBQ15382 184 aa9.82□□□□□ -0.84
SMAD3-204ENST00000540846 AWAT1Q58HT5 328 aa9.82□□□□□ -0.84
SMAD3-204ENST00000540846 SPATA31B1PQ5VZV4 182 aa9.82□□□□□ -0.84
SMAD3-204ENST00000540846 TMEM219Q86XT9 240 aa9.82□□□□□ -0.84
SMAD3-204ENST00000540846 IQCF2Q8IXL9 164 aa9.82□□□□□ -0.84
SMAD3-204ENST00000540846 GATAD1Q8WUU5 269 aa9.82□□□□□ -0.84
SMAD3-204ENST00000540846 RBM14Q96PK6 669 aaKnown RBP9.82□□□□□ -0.84
SMAD3-204ENST00000540846 TRGV9Q99603 122 aa9.82□□□□□ -0.84
SMAD3-204ENST00000540846 SLC25A33Q9BSK2 321 aa9.82□□□□□ -0.84
SMAD3-204ENST00000540846 MRPL32Q9BYC8 188 aaKnown RBP9.82□□□□□ -0.84
SMAD3-204ENST00000540846 WNT10AQ9GZT5 417 aa9.82□□□□□ -0.84
SMAD3-204ENST00000540846 FUT9Q9Y231 359 aa9.82□□□□□ -0.84
SMAD3-204ENST00000540846 H3BQ15 152 aa9.81□□□□□ -0.84
SMAD3-204ENST00000540846 HOXA3O43365 443 aaPredicted RBP9.81□□□□□ -0.84
SMAD3-204ENST00000540846 SRD5A1P18405 259 aa9.81□□□□□ -0.84
SMAD3-204ENST00000540846 GATA2P23769 480 aaPredicted RBP9.81□□□□□ -0.84
SMAD3-204ENST00000540846 CEBPGP53567 150 aa9.81□□□□□ -0.84
SMAD3-204ENST00000540846 ASPHD1Q5U4P2 390 aa9.81□□□□□ -0.84
SMAD3-204ENST00000540846 MIR17HGQ75NE6 70 aa9.81□□□□□ -0.84
SMAD3-204ENST00000540846 RNF2Q99496 336 aa9.81□□□□□ -0.84
SMAD3-204ENST00000540846 NIPSNAP3BQ9BS92 247 aa9.81□□□□□ -0.84
SMAD3-204ENST00000540846 NIPBLQ6KC79 2804 aaeCLIP9.81□□□□□ -0.84
SMAD3-204ENST00000540846 IGHV7-81A0A0B4J1V7 117 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 NUPL2O15504 423 aaKnown RBP9.8□□□□□ -0.84
SMAD3-204ENST00000540846 PAGE4O60829 102 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 GCHFRP30047 84 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 ZNF90Q03938 601 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 LY6EQ16553 131 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 FAM78BQ5VT40 261 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 TMEM88Q6PEY1 159 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 CBLN2Q8IUK8 224 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 C5orf56Q8N8D9 126 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 OR5R1Q8NH85 324 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 PFDN5Q99471 154 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 FAM103A1Q9BTL3 118 aaKnown RBP9.8□□□□□ -0.84
SMAD3-204ENST00000540846 ESM1Q9NQ30 184 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 TNFRSF19Q9NS68 423 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 TECRQ9NZ01 308 aaKnown RBP9.8□□□□□ -0.84
SMAD3-204ENST00000540846 VPREB3Q9UKI3 123 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 TMA7Q9Y2S6 64 aaKnown RBP9.8□□□□□ -0.84
SMAD3-204ENST00000540846 PUS1Q9Y606 427 aaKnown RBP eCLIP9.8□□□□□ -0.84
SMAD3-204ENST00000540846 ARL2-SNX15V9GYD0 113 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 IGLV11-55A0A075B6I3 123 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms