RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 RPL7L1Q6DKI1 246 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-213ENST00000540022 CLEC19AQ6UXS0 136 aa14.62□□□□□ -0.07
TNFRSF1A-213ENST00000540022 TXN2Q99757 166 aa14.62□□□□□ -0.07
TNFRSF1A-213ENST00000540022 WDR83OSQ9Y284 106 aa14.62□□□□□ -0.07
TNFRSF1A-213ENST00000540022 BOLA1Q9Y3E2 137 aa14.62□□□□□ -0.07
TNFRSF1A-213ENST00000540022 OR2T8A6NH00 312 aa14.61□□□□□ -0.07
TNFRSF1A-213ENST00000540022 TAAR5O14804 337 aa14.61□□□□□ -0.07
TNFRSF1A-213ENST00000540022 TRBV12-3P01733 135 aa14.61□□□□□ -0.07
TNFRSF1A-213ENST00000540022 CLEC3BP05452 202 aa14.61□□□□□ -0.07
TNFRSF1A-213ENST00000540022 GPR183P32249 361 aa14.61□□□□□ -0.07
TNFRSF1A-213ENST00000540022 CDX1P47902 265 aaPredicted RBP14.61□□□□□ -0.07
TNFRSF1A-213ENST00000540022 LSM4Q9Y4Z0 139 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-213ENST00000540022 IGKV1D-37A0A075B6S9 117 aa14.61□□□□□ -0.07
TNFRSF1A-213ENST00000540022 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-213ENST00000540022 KANTRA0A1W2PQU2 76 aa14.61□□□□□ -0.07
TNFRSF1A-213ENST00000540022 GNG7O60262 68 aa14.61□□□□□ -0.07
TNFRSF1A-213ENST00000540022 IGLC1P0CG04 106 aa14.61□□□□□ -0.07
TNFRSF1A-213ENST00000540022 OPCMLQ14982 345 aa14.61□□□□□ -0.07
TNFRSF1A-213ENST00000540022 THAP8Q8NA92 274 aa14.61□□□□□ -0.07
TNFRSF1A-213ENST00000540022 ANKRD34BA5PLL1 514 aa14.6□□□□□ -0.07
TNFRSF1A-213ENST00000540022 IFNA5P01569 189 aa14.6□□□□□ -0.07
TNFRSF1A-213ENST00000540022 CTSGP08311 255 aa14.6□□□□□ -0.07
TNFRSF1A-213ENST00000540022 LGALS1P09382 135 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-213ENST00000540022 OR10J1P30954 320 aa14.6□□□□□ -0.07
TNFRSF1A-213ENST00000540022 ADMP35318 185 aa14.6□□□□□ -0.07
TNFRSF1A-213ENST00000540022 ZNF266Q14584 549 aa14.6□□□□□ -0.07
TNFRSF1A-213ENST00000540022 TEPPQ6URK8 271 aa14.6□□□□□ -0.07
TNFRSF1A-213ENST00000540022 BTNL8Q6UX41 500 aa14.6□□□□□ -0.07
TNFRSF1A-213ENST00000540022 ATP6V0BQ99437 205 aa14.6□□□□□ -0.07
TNFRSF1A-213ENST00000540022 CHRDL1Q9BU40 450 aa14.6□□□□□ -0.07
TNFRSF1A-213ENST00000540022 WDR61Q9GZS3 305 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-213ENST00000540022 ZFP92A6NM28 416 aa14.59□□□□□ -0.07
TNFRSF1A-213ENST00000540022 PPP5D1E7EU14 171 aa14.59□□□□□ -0.07
TNFRSF1A-213ENST00000540022 I3L521 148 aa14.59□□□□□ -0.07
TNFRSF1A-213ENST00000540022 IGKV1-17P01599 117 aa14.59□□□□□ -0.07
TNFRSF1A-213ENST00000540022 FGF7P21781 194 aa14.59□□□□□ -0.07
TNFRSF1A-213ENST00000540022 MGST2Q99735 147 aa14.59□□□□□ -0.07
TNFRSF1A-213ENST00000540022 ZNF747Q9BV97 191 aa14.59□□□□□ -0.07
TNFRSF1A-213ENST00000540022 TSSC4Q9Y5U2 329 aaPredicted RBP14.59□□□□□ -0.07
TNFRSF1A-213ENST00000540022 A0A1W2PRX2 142 aa14.58□□□□□ -0.08
TNFRSF1A-213ENST00000540022 TGOLN2O43493 480 aa14.58□□□□□ -0.08
TNFRSF1A-213ENST00000540022 ZNF90Q03938 601 aa14.58□□□□□ -0.08
TNFRSF1A-213ENST00000540022 TIGITQ495A1 244 aa14.58□□□□□ -0.08
TNFRSF1A-213ENST00000540022 KLHL30-AS1Q8NEE0 82 aa14.58□□□□□ -0.08
TNFRSF1A-213ENST00000540022 C4orf3Q8WVX3 66 aa14.58□□□□□ -0.08
TNFRSF1A-213ENST00000540022 ZNF471Q9BX82 626 aaPredicted RBP14.58□□□□□ -0.08
TNFRSF1A-213ENST00000540022 PARD6GQ9BYG4 376 aaPredicted RBP14.58□□□□□ -0.08
TNFRSF1A-213ENST00000540022 GAR1Q9NY12 217 aaKnown RBP14.58□□□□□ -0.08
TNFRSF1A-213ENST00000540022 PEF1Q9UBV8 284 aaKnown RBP14.58□□□□□ -0.08
TNFRSF1A-213ENST00000540022 TRAV30A0A087WSZ9 112 aa14.57□□□□□ -0.08
TNFRSF1A-213ENST00000540022 BORCS7-ASMTA0A0B4J1R7 106 aa14.57□□□□□ -0.08
TNFRSF1A-213ENST00000540022 AGPAT2O15120 278 aa14.57□□□□□ -0.08
TNFRSF1A-213ENST00000540022 JTBO76095 146 aa14.57□□□□□ -0.08
TNFRSF1A-213ENST00000540022 ARL3P36405 182 aa14.57□□□□□ -0.08
TNFRSF1A-213ENST00000540022 RUNX1Q01196 453 aa14.57□□□□□ -0.08
TNFRSF1A-213ENST00000540022 SCGB1C1Q8TD33 95 aa14.57□□□□□ -0.08
TNFRSF1A-213ENST00000540022 TRGV9Q99603 122 aa14.57□□□□□ -0.08
TNFRSF1A-213ENST00000540022 ADARB2-AS1A8MUL3 147 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 NUDT19A8MXV4 375 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 BMPR1BO00238 502 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 NUPL2O15504 423 aaKnown RBP14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 TMEM182Q6ZP80 229 aaPredicted RBP14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 HSD17B11Q8NBQ5 300 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 ZNF414Q96IQ9 312 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 RSG1Q9BU20 258 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 NPCDR1Q9BY65 106 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 RFNGQ9Y644 331 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 PKD1L1Q8TDX9 2849 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 MGAM2Q2M2H8 2515 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 MPDU1O75352 247 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 CAMLGP49069 296 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 DEFB136Q30KP8 78 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 FAM209BQ5JX69 171 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 SPSB3Q6PJ21 355 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 CYP2G1PQ6ZSU1 146 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 C8orf86Q6ZUL3 223 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 CITED1Q99966 193 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 GGTLC1Q9BX51 225 aa14.56□□□□□ -0.08
TNFRSF1A-213ENST00000540022 CMYA5Q8N3K9 4069 aa14.55□□□□□ -0.08
TNFRSF1A-213ENST00000540022 IGHV4OR15-8A0A075B7B6 117 aa14.55□□□□□ -0.08
TNFRSF1A-213ENST00000540022 A0A087WW49 117 aa14.55□□□□□ -0.08
TNFRSF1A-213ENST00000540022 IGHV3-35A0A0C4DH35 117 aa14.55□□□□□ -0.08
TNFRSF1A-213ENST00000540022 C4BPBP20851 252 aa14.55□□□□□ -0.08
TNFRSF1A-213ENST00000540022 GATA2P23769 480 aaPredicted RBP14.55□□□□□ -0.08
TNFRSF1A-213ENST00000540022 ATP6V0CP27449 155 aa14.55□□□□□ -0.08
TNFRSF1A-213ENST00000540022 ARV1Q9H2C2 271 aa14.55□□□□□ -0.08
TNFRSF1A-213ENST00000540022 SLC45A2Q9UMX9 530 aa14.55□□□□□ -0.08
TNFRSF1A-213ENST00000540022 WNK1Q9H4A3 2382 aa14.54□□□□□ -0.08
TNFRSF1A-213ENST00000540022 OR2C1O95371 312 aa14.54□□□□□ -0.08
TNFRSF1A-213ENST00000540022 HSPB1P04792 205 aaKnown RBP14.54□□□□□ -0.08
TNFRSF1A-213ENST00000540022 YPEL3P61236 119 aaPredicted RBP14.54□□□□□ -0.08
TNFRSF1A-213ENST00000540022 RAB31Q13636 194 aa14.54□□□□□ -0.08
TNFRSF1A-213ENST00000540022 NSUN5P1Q3KNT7 163 aa14.54□□□□□ -0.08
TNFRSF1A-213ENST00000540022 MIC13Q5XKP0 118 aa14.54□□□□□ -0.08
TNFRSF1A-213ENST00000540022 SHISA2Q6UWI4 295 aa14.54□□□□□ -0.08
TNFRSF1A-213ENST00000540022 SLC51BQ86UW2 128 aa14.54□□□□□ -0.08
TNFRSF1A-213ENST00000540022 NDUFA11Q86Y39 141 aa14.54□□□□□ -0.08
TNFRSF1A-213ENST00000540022 DUX3Q96PT4 197 aa14.54□□□□□ -0.08
TNFRSF1A-213ENST00000540022 GINS3Q9BRX5 216 aa14.54□□□□□ -0.08
TNFRSF1A-213ENST00000540022 GGCTO75223 188 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms