RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 GFI1BQ5VTD9 330 aa12.02□□□□□ -0.48
CACNB1-206ENST00000539338 TREML4Q6UXN2 200 aa12.02□□□□□ -0.48
CACNB1-206ENST00000539338 IGFL3Q6UXB1 125 aa12.02□□□□□ -0.49
CACNB1-206ENST00000539338 THSD7BQ9C0I4 1608 aa12.02□□□□□ -0.49
CACNB1-206ENST00000539338 NBR2O15453 112 aa12.02□□□□□ -0.49
CACNB1-206ENST00000539338 CA1P00915 261 aaPredicted RBP12.02□□□□□ -0.49
CACNB1-206ENST00000539338 IGKV1-5P01602 117 aa12.02□□□□□ -0.49
CACNB1-206ENST00000539338 COX6CP09669 75 aa12.02□□□□□ -0.49
CACNB1-206ENST00000539338 TSPOP30536 169 aa12.02□□□□□ -0.49
CACNB1-206ENST00000539338 TSC2P49815 1807 aa12.02□□□□□ -0.49
CACNB1-206ENST00000539338 PHF3Q92576 2039 aaKnown RBP12.02□□□□□ -0.49
CACNB1-206ENST00000539338 THADAQ6YHU6 1953 aa12.02□□□□□ -0.49
CACNB1-206ENST00000539338 TRAV5A0A0B4J249 113 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 UBE2CO00762 179 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 NMSQ5H8A3 153 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 CIARTQ8N365 385 aaPredicted RBP12.01□□□□□ -0.49
CACNB1-206ENST00000539338 PMCHL2Q9BQD1 86 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 OR11H12B2RN74 326 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 OR11H1Q8NG94 326 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 OR11H2Q8NH07 326 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 PEMTQ9UBM1 199 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 IGHV3-11P01762 117 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 ADIPOQQ15848 244 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 C10orf55Q5SWW7 151 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 FER1L6-AS1Q8NA97 138 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 EPDR1Q9UM22 224 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 RSPO3Q9BXY4 272 aaPredicted RBP12.01□□□□□ -0.49
CACNB1-206ENST00000539338 SMAGPQ0VAQ4 97 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 SRSF7Q16629 238 aaKnown RBP eCLIP12.01□□□□□ -0.49
CACNB1-206ENST00000539338 SPATA31B1PQ5VZV4 182 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 TEX38Q6PEX7 206 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 PRDM13Q9H4Q3 707 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 OTORQ9NRC9 128 aa12.01□□□□□ -0.49
CACNB1-206ENST00000539338 IGKV3OR2-268A0A0C4DH90 116 aa12□□□□□ -0.49
CACNB1-206ENST00000539338 GTSCR1Q86UQ5 136 aa12□□□□□ -0.49
CACNB1-206ENST00000539338 FOXC2Q99958 501 aa12□□□□□ -0.49
CACNB1-206ENST00000539338 SOX21Q9Y651 276 aaPredicted RBP12□□□□□ -0.49
CACNB1-206ENST00000539338 A0A0G2JLM5 398 aa12□□□□□ -0.49
CACNB1-206ENST00000539338 CEACAM4O75871 244 aa12□□□□□ -0.49
CACNB1-206ENST00000539338 ASIPP42127 132 aa12□□□□□ -0.49
CACNB1-206ENST00000539338 NUTF2P61970 127 aaKnown RBP12□□□□□ -0.49
CACNB1-206ENST00000539338 PLAURQ03405 335 aa12□□□□□ -0.49
CACNB1-206ENST00000539338 ERASQ7Z444 233 aa12□□□□□ -0.49
CACNB1-206ENST00000539338 SRRM5B3KS81 715 aa12□□□□□ -0.49
CACNB1-206ENST00000539338 NSUN5P1Q3KNT7 163 aa12□□□□□ -0.49
CACNB1-206ENST00000539338 TMEM170BQ5T4T1 132 aa12□□□□□ -0.49
CACNB1-206ENST00000539338 RPP25LQ8N5L8 163 aaKnown RBP12□□□□□ -0.49
CACNB1-206ENST00000539338 ZNF256Q9Y2P7 627 aaPredicted RBP12□□□□□ -0.49
CACNB1-206ENST00000539338 GGTLC1Q9BX51 225 aa12□□□□□ -0.49
CACNB1-206ENST00000539338 A0A1W2PRE2 83 aa11.99□□□□□ -0.49
CACNB1-206ENST00000539338 KIR3DL3Q8N743 410 aa11.99□□□□□ -0.49
CACNB1-206ENST00000539338 DMRTA1Q5VZB9 504 aa11.99□□□□□ -0.49
CACNB1-206ENST00000539338 ORMDL3Q8N138 153 aa11.99□□□□□ -0.49
CACNB1-206ENST00000539338 CD177Q8N6Q3 437 aa11.99□□□□□ -0.49
CACNB1-206ENST00000539338 RNF125Q96EQ8 232 aa11.99□□□□□ -0.49
CACNB1-206ENST00000539338 HIST1H2BLQ99880 126 aa11.99□□□□□ -0.49
CACNB1-206ENST00000539338 OSTCQ9NRP0 149 aa11.99□□□□□ -0.49
CACNB1-206ENST00000539338 INTS1Q8N201 2190 aaKnown RBP11.99□□□□□ -0.49
CACNB1-206ENST00000539338 TRAV3A0A0B4J244 114 aa11.99□□□□□ -0.49
CACNB1-206ENST00000539338 SMIM13P0DJ93 91 aa11.99□□□□□ -0.49
CACNB1-206ENST00000539338 TMEM42Q69YG0 159 aa11.99□□□□□ -0.49
CACNB1-206ENST00000539338 RNF223E7ERA6 249 aa11.99□□□□□ -0.49
CACNB1-206ENST00000539338 LINC00205P59089 165 aa11.99□□□□□ -0.49
CACNB1-206ENST00000539338 FER1L5A0AVI2 2057 aa11.98□□□□□ -0.49
CACNB1-206ENST00000539338 DERL1Q9BUN8 251 aa11.98□□□□□ -0.49
CACNB1-206ENST00000539338 DKK4Q9UBT3 224 aa11.98□□□□□ -0.49
CACNB1-206ENST00000539338 PRR31Q5SQ13 230 aa11.98□□□□□ -0.49
CACNB1-206ENST00000539338 MYLKQ15746 1914 aa11.98□□□□□ -0.49
CACNB1-206ENST00000539338 PEF1Q9UBV8 284 aaKnown RBP11.98□□□□□ -0.49
CACNB1-206ENST00000539338 KIAA2026Q5HYC2 2103 aa11.98□□□□□ -0.49
CACNB1-206ENST00000539338 B3GALT5-AS1P59052 145 aa11.98□□□□□ -0.49
CACNB1-206ENST00000539338 FAM71F2Q6NXP2 309 aa11.98□□□□□ -0.49
CACNB1-206ENST00000539338 GEMIN7Q9H840 131 aaKnown RBP11.98□□□□□ -0.49
CACNB1-206ENST00000539338 CRIM1Q9NZV1 1036 aa11.98□□□□□ -0.49
CACNB1-206ENST00000539338 FAM90A9PA6NNJ1 464 aa11.97□□□□□ -0.49
CACNB1-206ENST00000539338 DPH3Q96FX2 82 aa11.97□□□□□ -0.49
CACNB1-206ENST00000539338 SCGB3A1Q96QR1 104 aa11.97□□□□□ -0.49
CACNB1-206ENST00000539338 RPUSD1Q9UJJ7 312 aaKnown RBP11.97□□□□□ -0.49
CACNB1-206ENST00000539338 RNASE4P34096 147 aaKnown RBP11.97□□□□□ -0.49
CACNB1-206ENST00000539338 JOSD1Q15040 202 aaPredicted RBP11.97□□□□□ -0.49
CACNB1-206ENST00000539338 MCRIP2Q9BUT9 160 aaKnown RBP11.97□□□□□ -0.49
CACNB1-206ENST00000539338 A0A1W2PRX2 142 aa11.97□□□□□ -0.49
CACNB1-206ENST00000539338 PSMB11A5LHX3 300 aa11.97□□□□□ -0.49
CACNB1-206ENST00000539338 STAG3L3P0CL85 134 aa11.97□□□□□ -0.49
CACNB1-206ENST00000539338 Q6AWC8 147 aa11.97□□□□□ -0.49
CACNB1-206ENST00000539338 UBE2DNLQ8IWF7 75 aa11.97□□□□□ -0.49
CACNB1-206ENST00000539338 MGAMO43451 1857 aa11.97□□□□□ -0.49
CACNB1-206ENST00000539338 MYOD1P15172 320 aa11.97□□□□□ -0.49
CACNB1-206ENST00000539338 HIST3H2BBQ8N257 126 aa11.97□□□□□ -0.49
CACNB1-206ENST00000539338 SEPSECSQ9HD40 501 aaKnown RBP11.97□□□□□ -0.49
CACNB1-206ENST00000539338 MLNRO43193 412 aa11.96□□□□□ -0.49
CACNB1-206ENST00000539338 MEIG1Q5JSS6 88 aa11.96□□□□□ -0.49
CACNB1-206ENST00000539338 NDUFAF3Q9BU61 184 aa11.96□□□□□ -0.49
CACNB1-206ENST00000539338 PLSCR4Q9NRQ2 329 aa11.96□□□□□ -0.49
CACNB1-206ENST00000539338 PTPRDP23468 1912 aa11.96□□□□□ -0.49
CACNB1-206ENST00000539338 A0A0G2JRQ6 117 aa11.96□□□□□ -0.49
CACNB1-206ENST00000539338 GLMPQ8WWB7 406 aa11.96□□□□□ -0.49
CACNB1-206ENST00000539338 CLDN16Q9Y5I7 305 aa11.96□□□□□ -0.49
CACNB1-206ENST00000539338 FNDC1Q4ZHG4 1894 aaPredicted RBP11.96□□□□□ -0.49
CACNB1-206ENST00000539338 TRBV24-1A0A075B6N3 115 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms