RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 PRR13Q9NZ81 148 aa16.33■□□□□ 0.2
SCARB1-206ENST00000539320 RABAC1Q9UI14 185 aa16.33■□□□□ 0.2
SCARB1-206ENST00000539320 NXPH3O95157 252 aa16.32■□□□□ 0.2
SCARB1-206ENST00000539320 IGLC1P0CG04 106 aa16.32■□□□□ 0.2
SCARB1-206ENST00000539320 SLC25A4P12235 298 aa16.32■□□□□ 0.2
SCARB1-206ENST00000539320 CRYBB3P26998 211 aa16.32■□□□□ 0.2
SCARB1-206ENST00000539320 RND2P52198 227 aa16.32■□□□□ 0.2
SCARB1-206ENST00000539320 DEFB131AP59861 70 aa16.32■□□□□ 0.2
SCARB1-206ENST00000539320 PRSS54Q6PEW0 395 aa16.32■□□□□ 0.2
SCARB1-206ENST00000539320 FAM24BQ8N5W8 94 aa16.32■□□□□ 0.2
SCARB1-206ENST00000539320 GATAD1Q8WUU5 269 aa16.32■□□□□ 0.2
SCARB1-206ENST00000539320 SOSTQ9BQB4 213 aa16.32■□□□□ 0.2
SCARB1-206ENST00000539320 CACFD1Q9UGQ2 172 aa16.32■□□□□ 0.2
SCARB1-206ENST00000539320 KCNIP3Q9Y2W7 256 aa16.32■□□□□ 0.2
SCARB1-206ENST00000539320 NPY1RP25929 384 aa16.31■□□□□ 0.2
SCARB1-206ENST00000539320 TNFSF8P32971 234 aa16.31■□□□□ 0.2
SCARB1-206ENST00000539320 P2RY1P47900 373 aa16.31■□□□□ 0.2
SCARB1-206ENST00000539320 LEMD1Q68G75 181 aa16.31■□□□□ 0.2
SCARB1-206ENST00000539320 STXBP6Q8NFX7 210 aa16.31■□□□□ 0.2
SCARB1-206ENST00000539320 MCFD2Q8NI22 146 aa16.31■□□□□ 0.2
SCARB1-206ENST00000539320 TMEM170AQ8WVE7 144 aa16.31■□□□□ 0.2
SCARB1-206ENST00000539320 RBM38Q9H0Z9 239 aaKnown RBP16.31■□□□□ 0.2
SCARB1-206ENST00000539320 FABP12A6NFH5 140 aa16.3■□□□□ 0.2
SCARB1-206ENST00000539320 CA1P00915 261 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-206ENST00000539320 OR10J1P30954 320 aa16.3■□□□□ 0.2
SCARB1-206ENST00000539320 NOXA1Q86UR1 476 aa16.3■□□□□ 0.2
SCARB1-206ENST00000539320 LINC00476Q8WZB0 136 aa16.3■□□□□ 0.2
SCARB1-206ENST00000539320 GRAMD2BQ96HH9 432 aa16.3■□□□□ 0.2
SCARB1-206ENST00000539320 A0A0B4J2A0 478 aa16.29■□□□□ 0.2
SCARB1-206ENST00000539320 AKR1C4P17516 323 aa16.29■□□□□ 0.2
SCARB1-206ENST00000539320 NMSQ5H8A3 153 aa16.29■□□□□ 0.2
SCARB1-206ENST00000539320 ETFRF1Q6IPR1 90 aa16.29■□□□□ 0.2
SCARB1-206ENST00000539320 SHPKQ9UHJ6 478 aa16.29■□□□□ 0.2
SCARB1-206ENST00000539320 A6NHS1 94 aa16.28■□□□□ 0.2
SCARB1-206ENST00000539320 K7EQG2 157 aa16.28■□□□□ 0.2
SCARB1-206ENST00000539320 ANXA3P12429 323 aa16.28■□□□□ 0.2
SCARB1-206ENST00000539320 FAUP35544 74 aaKnown RBP16.28■□□□□ 0.2
SCARB1-206ENST00000539320 CCR6P51684 374 aa16.28■□□□□ 0.2
SCARB1-206ENST00000539320 YPEL3P61236 119 aaPredicted RBP16.28■□□□□ 0.2
SCARB1-206ENST00000539320 SUPT4H1P63272 117 aaKnown RBP16.28■□□□□ 0.2
SCARB1-206ENST00000539320 SRPXP78539 464 aa16.28■□□□□ 0.2
SCARB1-206ENST00000539320 CEMP1Q6PRD7 247 aaPredicted RBP16.28■□□□□ 0.2
SCARB1-206ENST00000539320 Q8WTZ3 238 aa16.28■□□□□ 0.2
SCARB1-206ENST00000539320 RARRES2Q99969 163 aa16.28■□□□□ 0.2
SCARB1-206ENST00000539320 BATF3Q9NR55 127 aa16.28■□□□□ 0.2
SCARB1-206ENST00000539320 HNRNPCP07910 306 aaKnown RBP eCLIP16.27■□□□□ 0.2
SCARB1-206ENST00000539320 SMCO1Q147U7 214 aa16.27■□□□□ 0.2
SCARB1-206ENST00000539320 RBMS2Q15434 407 aaKnown RBP16.27■□□□□ 0.2
SCARB1-206ENST00000539320 STHQ8IWL8 128 aa16.27■□□□□ 0.2
SCARB1-206ENST00000539320 LGI3Q8N145 548 aa16.27■□□□□ 0.2
SCARB1-206ENST00000539320 TRIM63Q969Q1 353 aa16.27■□□□□ 0.2
SCARB1-206ENST00000539320 NDUFA13Q9P0J0 144 aa16.27■□□□□ 0.2
SCARB1-206ENST00000539320 HSPB7Q9UBY9 170 aa16.27■□□□□ 0.2
SCARB1-206ENST00000539320 U3KQE9 123 aa16.27■□□□□ 0.2
SCARB1-206ENST00000539320 IFNA10P01566 189 aa16.26■□□□□ 0.19
SCARB1-206ENST00000539320 EIF2B2P49770 351 aaKnown RBP16.26■□□□□ 0.19
SCARB1-206ENST00000539320 KLF9Q13886 244 aaPredicted RBP16.26■□□□□ 0.19
SCARB1-206ENST00000539320 LYZL2Q7Z4W2 148 aa16.26■□□□□ 0.19
SCARB1-206ENST00000539320 OR11H2Q8NH07 326 aa16.26■□□□□ 0.19
SCARB1-206ENST00000539320 DTD1Q8TEA8 209 aa16.26■□□□□ 0.19
SCARB1-206ENST00000539320 ACY3Q96HD9 319 aa16.26■□□□□ 0.19
SCARB1-206ENST00000539320 C11orf68Q9H3H3 251 aaKnown RBP16.26■□□□□ 0.19
SCARB1-206ENST00000539320 KLK5Q9Y337 293 aaPredicted RBP16.26■□□□□ 0.19
SCARB1-206ENST00000539320 HELTA6NFD8 242 aa16.25■□□□□ 0.19
SCARB1-206ENST00000539320 IL4P05112 153 aa16.25■□□□□ 0.19
SCARB1-206ENST00000539320 ZNF688P0C7X2 276 aa16.25■□□□□ 0.19
SCARB1-206ENST00000539320 AP3S2P59780 193 aa16.25■□□□□ 0.19
SCARB1-206ENST00000539320 GLMPQ8WWB7 406 aa16.25■□□□□ 0.19
SCARB1-206ENST00000539320 NPIPB3Q92617 1050 aa16.25■□□□□ 0.19
SCARB1-206ENST00000539320 U3KQ87 197 aa16.25■□□□□ 0.19
SCARB1-206ENST00000539320 AGRNO00468 2067 aa16.25■□□□□ 0.19
SCARB1-206ENST00000539320 USF2Q15853 346 aaPredicted RBP16.24■□□□□ 0.19
SCARB1-206ENST00000539320 PYDC2Q56P42 97 aa16.24■□□□□ 0.19
SCARB1-206ENST00000539320 C16orf54Q6UWD8 224 aa16.24■□□□□ 0.19
SCARB1-206ENST00000539320 DCANP1Q8TF63 244 aa16.24■□□□□ 0.19
SCARB1-206ENST00000539320 RBKSQ9H477 322 aa16.24■□□□□ 0.19
SCARB1-206ENST00000539320 V9GYH0 126 aa16.24■□□□□ 0.19
SCARB1-206ENST00000539320 PIGBOS1A0A0B4J2F0 54 aa16.23■□□□□ 0.19
SCARB1-206ENST00000539320 LY6G6CO95867 125 aa16.23■□□□□ 0.19
SCARB1-206ENST00000539320 TOMM40O96008 361 aa16.23■□□□□ 0.19
SCARB1-206ENST00000539320 TMED4Q7Z7H5 227 aa16.23■□□□□ 0.19
SCARB1-206ENST00000539320 TRPT1Q86TN4 253 aaKnown RBP16.23■□□□□ 0.19
SCARB1-206ENST00000539320 OR1S1Q8NH92 325 aa16.23■□□□□ 0.19
SCARB1-206ENST00000539320 PHLDA1Q8WV24 401 aaPredicted RBP16.23■□□□□ 0.19
SCARB1-206ENST00000539320 DUXBA0A1W2PPF3 345 aa16.22■□□□□ 0.19
SCARB1-206ENST00000539320 DHRS2Q13268 280 aa16.22■□□□□ 0.19
SCARB1-206ENST00000539320 TOMM5Q8N4H5 51 aa16.22■□□□□ 0.19
SCARB1-206ENST00000539320 KNCNA6PVL3 124 aa16.21■□□□□ 0.19
SCARB1-206ENST00000539320 IFNA4P05014 189 aa16.21■□□□□ 0.19
SCARB1-206ENST00000539320 RD3LP0DJH9 198 aa16.21■□□□□ 0.19
SCARB1-206ENST00000539320 SPP1P10451 314 aa16.21■□□□□ 0.19
SCARB1-206ENST00000539320 MORN3Q6PF18 240 aaPredicted RBP16.21■□□□□ 0.19
SCARB1-206ENST00000539320 MFFQ9GZY8 342 aa16.21■□□□□ 0.19
SCARB1-206ENST00000539320 S100A5P33763 92 aa16.2■□□□□ 0.18
SCARB1-206ENST00000539320 AP2S1P53680 142 aaPredicted RBP16.2■□□□□ 0.18
SCARB1-206ENST00000539320 ATP5IP56385 69 aaPredicted RBP16.2■□□□□ 0.18
SCARB1-206ENST00000539320 ZNF79Q15937 498 aa16.2■□□□□ 0.18
SCARB1-206ENST00000539320 TMEM41BQ5BJD5 291 aa16.2■□□□□ 0.18
SCARB1-206ENST00000539320 TMEM128Q5BJH2 165 aa16.2■□□□□ 0.18
SCARB1-206ENST00000539320 C11orf45Q8TAV5 145 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 315.5 ms