RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 SPAG16Q8N0X2 631 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 STXBP6Q8NFX7 210 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 OR1L8Q8NGR8 309 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 OR10R2Q8NGX6 335 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 RAB40CQ96S21 281 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 GPHA2Q96T91 129 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 HINT2Q9BX68 163 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 SCPEP1Q9HB40 452 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 MTFP1Q9UDX5 166 aa8.5□□□□□ -1.05
YBX3-207ENST00000539204 A0A1W2PS18 150 aa8.49□□□□□ -1.05
YBX3-207ENST00000539204 TNFSF12O43508 249 aa8.49□□□□□ -1.05
YBX3-207ENST00000539204 GNG7O60262 68 aa8.49□□□□□ -1.05
YBX3-207ENST00000539204 HNRNPCP07910 306 aaKnown RBP eCLIP8.49□□□□□ -1.05
YBX3-207ENST00000539204 PRSS3P35030 304 aa8.49□□□□□ -1.05
YBX3-207ENST00000539204 XGP55808 180 aa8.49□□□□□ -1.05
YBX3-207ENST00000539204 FAM222AQ5U5X8 452 aa8.49□□□□□ -1.05
YBX3-207ENST00000539204 GSG1LQ6UXU4 331 aa8.49□□□□□ -1.05
YBX3-207ENST00000539204 DMBX1Q8NFW5 382 aa8.49□□□□□ -1.05
YBX3-207ENST00000539204 GPX8Q8TED1 209 aa8.49□□□□□ -1.05
YBX3-207ENST00000539204 LSM10Q969L4 123 aaKnown RBP8.49□□□□□ -1.05
YBX3-207ENST00000539204 ATG5Q9H1Y0 275 aa8.49□□□□□ -1.05
YBX3-207ENST00000539204 AUNIPQ9H7T9 357 aa8.49□□□□□ -1.05
YBX3-207ENST00000539204 NDUFA4L2Q9NRX3 87 aa8.49□□□□□ -1.05
YBX3-207ENST00000539204 TMEM140Q9NV12 185 aa8.49□□□□□ -1.05
YBX3-207ENST00000539204 TRAV18A0A075B6X5 111 aa8.48□□□□□ -1.05
YBX3-207ENST00000539204 MFNGO00587 321 aa8.48□□□□□ -1.05
YBX3-207ENST00000539204 RBFOX2O43251 390 aaKnown RBP eCLIP8.48□□□□□ -1.05
YBX3-207ENST00000539204 BTF3P20290 206 aaKnown RBP8.48□□□□□ -1.05
YBX3-207ENST00000539204 POU2AF1Q16633 256 aa8.48□□□□□ -1.05
YBX3-207ENST00000539204 ZNF705AQ6ZN79 300 aaPredicted RBP8.48□□□□□ -1.05
YBX3-207ENST00000539204 KLK11Q9UBX7 282 aa8.48□□□□□ -1.05
YBX3-207ENST00000539204 RFNGQ9Y644 331 aa8.48□□□□□ -1.05
YBX3-207ENST00000539204 ZNF705FA8MVS1 300 aaPredicted RBP8.47□□□□□ -1.05
YBX3-207ENST00000539204 INMT-MINDY4F8WBC2 141 aa8.47□□□□□ -1.05
YBX3-207ENST00000539204 TCRBP04435 133 aa8.47□□□□□ -1.05
YBX3-207ENST00000539204 ZNF705DP0CH99 300 aaPredicted RBP8.47□□□□□ -1.05
YBX3-207ENST00000539204 ZNF705BP0CI00 300 aaPredicted RBP8.47□□□□□ -1.05
YBX3-207ENST00000539204 HIST1H1DP16402 221 aaKnown RBP8.47□□□□□ -1.05
YBX3-207ENST00000539204 NPPCP23582 126 aa8.47□□□□□ -1.05
YBX3-207ENST00000539204 DTYMKP23919 212 aa8.47□□□□□ -1.05
YBX3-207ENST00000539204 FAUP35544 74 aaKnown RBP8.47□□□□□ -1.05
YBX3-207ENST00000539204 CCL18P55774 89 aa8.47□□□□□ -1.05
YBX3-207ENST00000539204 OR1P1Q8NH06 330 aa8.47□□□□□ -1.05
YBX3-207ENST00000539204 MOB3AQ96BX8 217 aa8.47□□□□□ -1.05
YBX3-207ENST00000539204 MISP3Q96FF7 219 aa8.47□□□□□ -1.05
YBX3-207ENST00000539204 MDFICQ9P1T7 246 aa8.47□□□□□ -1.05
YBX3-207ENST00000539204 IGHV3OR16-12A0A075B7B8 117 aa8.46□□□□□ -1.06
YBX3-207ENST00000539204 A0A0B4J293 547 aa8.46□□□□□ -1.06
YBX3-207ENST00000539204 C7orf66A4D0T2 115 aa8.46□□□□□ -1.06
YBX3-207ENST00000539204 I3L2K1 104 aa8.46□□□□□ -1.06
YBX3-207ENST00000539204 IGHV3-48P01763 117 aa8.46□□□□□ -1.06
YBX3-207ENST00000539204 ARL6IP1Q15041 203 aa8.46□□□□□ -1.06
YBX3-207ENST00000539204 PSMG4Q5JS54 123 aa8.46□□□□□ -1.06
YBX3-207ENST00000539204 AKAP14Q86UN6 197 aa8.46□□□□□ -1.06
YBX3-207ENST00000539204 TMEM229BQ8NBD8 167 aa8.46□□□□□ -1.06
YBX3-207ENST00000539204 ZBTB34Q8NCN2 500 aa8.46□□□□□ -1.06
YBX3-207ENST00000539204 DCANP1Q8TF63 244 aa8.46□□□□□ -1.06
YBX3-207ENST00000539204 TMEM56Q96MV1 263 aa8.46□□□□□ -1.06
YBX3-207ENST00000539204 CCL28Q9NRJ3 127 aa8.46□□□□□ -1.06
YBX3-207ENST00000539204 PGPEP1Q9NXJ5 209 aa8.46□□□□□ -1.06
YBX3-207ENST00000539204 OR51B2Q9Y5P1 312 aa8.46□□□□□ -1.06
YBX3-207ENST00000539204 PUS1Q9Y606 427 aaKnown RBP eCLIP8.46□□□□□ -1.06
YBX3-207ENST00000539204 MT-CO2P00403 227 aa8.45□□□□□ -1.06
YBX3-207ENST00000539204 AKAIN1P0CW23 69 aa8.45□□□□□ -1.06
YBX3-207ENST00000539204 DAD1P61803 113 aa8.45□□□□□ -1.06
YBX3-207ENST00000539204 DHRS2Q13268 280 aa8.45□□□□□ -1.06
YBX3-207ENST00000539204 CDNFQ49AH0 187 aa8.45□□□□□ -1.06
YBX3-207ENST00000539204 SERTAD4-AS1Q5TG53 156 aa8.45□□□□□ -1.06
YBX3-207ENST00000539204 ZNF600Q6ZNG1 722 aa8.45□□□□□ -1.06
YBX3-207ENST00000539204 OR6F1Q8NGZ6 308 aa8.45□□□□□ -1.06
YBX3-207ENST00000539204 SECTM1Q8WVN6 248 aa8.45□□□□□ -1.06
YBX3-207ENST00000539204 Q9H8V8 135 aa8.45□□□□□ -1.06
YBX3-207ENST00000539204 PLEKHA2Q9HB19 425 aa8.45□□□□□ -1.06
YBX3-207ENST00000539204 RPS10-NUDT3A0A1W2PQS6 291 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 HELTA6NFD8 242 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 H3BMM0 161 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 FAM229AH3BQW9 127 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 BOLA2-SMG1P6H3BVE0 249 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 PRAF2O60831 178 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 SNAPC5O75971 98 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 NUDT3O95989 172 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 SMR3BP02814 79 aaPredicted RBP8.44□□□□□ -1.06
YBX3-207ENST00000539204 H2AFB2P0C5Z0 115 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 PTHLHP12272 177 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 NAT1P18440 290 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 GNRHRP30968 328 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 RCVRNP35243 200 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 P2RY1P47900 373 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 NPBWR1P48145 328 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 EIF2B2P49770 351 aaKnown RBP8.44□□□□□ -1.06
YBX3-207ENST00000539204 TAS2R19P59542 299 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 ERVK-16P61578 105 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 DLK1P80370 383 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 CATR1Q13166 79 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 MSMO1Q15800 293 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 RNASE12Q5GAN4 147 aaKnown RBP8.44□□□□□ -1.06
YBX3-207ENST00000539204 ZNF503Q96F45 646 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 METTL26Q96S19 204 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 ZFAND3Q9H8U3 227 aa8.44□□□□□ -1.06
YBX3-207ENST00000539204 ELF5Q9UKW6 265 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms