RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 LYPD6Q86Y78 171 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 SLC22A24Q8N4F4 322 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 GATD1Q8NB37 220 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 CHST4Q8NCG5 386 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 NUP37Q8NFH4 326 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 OR4M1Q8NGD0 313 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 OR5A2Q8NGI9 324 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 OR10G7Q8NGN6 311 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 OR2K2Q8NGT1 345 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 OR2G2Q8NGZ5 317 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 OR6F1Q8NGZ6 308 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 RHOXF1Q8NHV9 184 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 ASB13Q8WXK3 278 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 OR5P3Q8WZ94 311 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 SLC7A6Q92536 515 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 RNASE6Q93091 150 aaKnown RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 MRPL24Q96A35 216 aaKnown RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 BORCS7Q96B45 105 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 DNAJA3Q96EY1 480 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 LINC00052Q96N35 136 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 TBX15Q96SF7 602 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 AMELYQ99218 206 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 PDCD1LG2Q9BQ51 273 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 HSPB9Q9BQS6 159 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 RHNO1Q9BSD3 238 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 PSMG3Q9BT73 122 aaPredicted RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 EMC6Q9BV81 110 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 FGF23Q9GZV9 251 aaPredicted RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 RNASE7Q9H1E1 156 aaKnown RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 GTSF1LQ9H1H1 148 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 RBKSQ9H477 322 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 MOB1AQ9H8S9 216 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 Q9H8V8 135 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 REEP1Q9H902 201 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 NRN1Q9NPD7 142 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 PLSCR3Q9NRY6 295 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 RBFOX1Q9NWB1 397 aaKnown RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 SPANXCQ9NY87 97 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF226Q9NYT6 803 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 TAS2R16Q9NYV7 291 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 IDI2-AS1Q9NZ38 188 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 ST3GAL6Q9Y274 331 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 TP53TG1Q9Y2A0 90 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 LAMTOR2Q9Y2Q5 125 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 CARHSP1Q9Y2V2 147 aaKnown RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 LSM2Q9Y333 95 aaKnown RBP1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 WIPI2Q9Y4P8 454 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 RFNGQ9Y644 331 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 LHFPL6Q9Y693 200 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 TENM1Q9UKZ4 2725 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 VWFP04275 2813 aa1.43□□□□□ -2.18
CBX3P4-201ENST00000538909 JMJD1CQ15652 2540 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 IGHV2OR16-5A0A0B4J2B6 119 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 IGHV2-70DA0A0C4DH43 119 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 FAM236DA0A1B0GTK5 79 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 C5orf63A6NC05 138 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 OR5B21A6NL26 309 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 FABP5P3A8MUU1 101 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 E7EQL1 145 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 C11orf98E9PRG8 122 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 F6UB75 175 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 H7C1C5 153 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 M0R129 80 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 PDCD5O14737 125 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 HSD17B6O14756 317 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 PPIHO43447 177 aaKnown RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 MRPL33O75394 65 aaKnown RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 LYZL6O75951 148 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 CDRT1O95170 752 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 NDUFC2O95298 119 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 FSTL3O95633 263 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 NUDT14O95848 222 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 MOSP00540 346 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 LALBAP00709 142 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 HBZP02008 142 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 PMP2P02689 132 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 CRYBA1P05813 215 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 SOD3P08294 240 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 AKAIN1P0CW23 69 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 FAM236CP0DP71 79 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 PIPP12273 146 aaPredicted RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 FOLR2P14207 255 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF32P17041 273 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 IGFBP3P17936 291 aaPredicted RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 RPL7P18124 248 aaKnown RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 RCC1P18754 421 aaPredicted RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 ATF1P18846 271 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 CXCL3P19876 107 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 PRTN3P24158 256 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 CRHBPP24387 322 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 CDK2P24941 298 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 BRS3P32247 399 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 RPS27P42677 84 aaKnown RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 GUCA1AP43080 201 aaPredicted RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 RPL29P47914 159 aaKnown RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 GNG4P50150 75 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 AKR1C2P52895 323 aa1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 SUB1P53999 127 aaKnown RBP eCLIP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 RBM11P57052 281 aaKnown RBP1.42□□□□□ -2.18
CBX3P4-201ENST00000538909 OR12D2P58182 307 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms