RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 CNTFRP26992 372 aa9.63□□□□□ -0.87
CPNE8-203ENST00000538596 LOXP28300 417 aaPredicted RBP9.63□□□□□ -0.87
CPNE8-203ENST00000538596 PAFAH1B2P68402 229 aa9.63□□□□□ -0.87
CPNE8-203ENST00000538596 PRR27Q6MZM9 219 aa9.63□□□□□ -0.87
CPNE8-203ENST00000538596 ST6GALNAC6Q969X2 333 aa9.63□□□□□ -0.87
CPNE8-203ENST00000538596 ORM2P19652 201 aa9.63□□□□□ -0.87
CPNE8-203ENST00000538596 SRIP30626 198 aa9.63□□□□□ -0.87
CPNE8-203ENST00000538596 RANP62826 216 aaKnown RBP9.63□□□□□ -0.87
CPNE8-203ENST00000538596 Q0VG73 95 aa9.63□□□□□ -0.87
CPNE8-203ENST00000538596 MRGPRG-AS1Q2M3A8 158 aa9.63□□□□□ -0.87
CPNE8-203ENST00000538596 BLNKQ8WV28 456 aa9.63□□□□□ -0.87
CPNE8-203ENST00000538596 ABCA4P78363 2273 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 SMIM27A0A1W2PRY6 76 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 C22orf46C9J442 243 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 H3BTX0 84 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 BMPR1BO00238 502 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 PRRG2O14669 202 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 FSTL3O95633 263 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 COMPP49747 757 aaPredicted RBP9.62□□□□□ -0.87
CPNE8-203ENST00000538596 ATP5IP56385 69 aaPredicted RBP9.62□□□□□ -0.87
CPNE8-203ENST00000538596 KRTDAPP60985 99 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 LRRC10Q5BKY1 277 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 ZNF705AQ6ZN79 300 aaPredicted RBP9.62□□□□□ -0.87
CPNE8-203ENST00000538596 LINC00305Q7Z4B0 112 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 ZNF329Q86UD4 541 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 MRPL32Q9BYC8 188 aaKnown RBP9.62□□□□□ -0.87
CPNE8-203ENST00000538596 CDC42EP3Q9UKI2 254 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 WASHC3Q9Y3C0 194 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 ASH1LQ9NR48 2969 aaKnown RBP9.62□□□□□ -0.87
CPNE8-203ENST00000538596 NBASA2RRP1 2371 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 A0A1W2PN81 502 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 TCRBV4S1A1TA0A5B7 111 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 PMCHP20382 165 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 MFAP2P55001 183 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 SLAQ13239 276 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 PRR30Q53SZ7 412 aaPredicted RBP9.62□□□□□ -0.87
CPNE8-203ENST00000538596 PDPNQ86YL7 162 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 FXYD5Q96DB9 178 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 GSX1Q9H4S2 264 aaPredicted RBP9.62□□□□□ -0.87
CPNE8-203ENST00000538596 RPH3ALQ9UNE2 315 aa9.62□□□□□ -0.87
CPNE8-203ENST00000538596 LYNX1G3V0Z9 82 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 CORTO00230 105 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 TNFRSF13BO14836 293 aaPredicted RBP9.61□□□□□ -0.87
CPNE8-203ENST00000538596 ZNF253O75346 499 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 GPX1P07203 203 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 LYNX1P0DP58 116 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 TDGF1P3P51864 188 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 SSTP61278 116 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 FOXC1Q12948 553 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 LBHQ53QV2 105 aaPredicted RBP9.61□□□□□ -0.87
CPNE8-203ENST00000538596 ZNF841Q6ZN19 808 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 FAM19A2Q8N3H0 131 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 SIGLECL1Q8N7X8 197 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 TMEM186Q96B77 213 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 TBL2Q9Y4P3 447 aaKnown RBP9.61□□□□□ -0.87
CPNE8-203ENST00000538596 TRBV9A0A0B4J1U6 114 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 AMY1AP04745 511 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 DLX6P56179 175 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 NUTF2P61970 127 aaKnown RBP9.61□□□□□ -0.87
CPNE8-203ENST00000538596 LEMD1Q68G75 181 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 TEX43Q6ZNM6 134 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 OR1B1Q8NGR6 318 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 RNASE6Q93091 150 aaKnown RBP9.61□□□□□ -0.87
CPNE8-203ENST00000538596 IGF2RP11717 2491 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 SPTA1P02549 2419 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 A0A1W2PS18 150 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 PEX7O00628 323 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 BRS3P32247 399 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 AMTP48728 403 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 GDF5OSQ5U4N7 250 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 WDR73Q6P4I2 378 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 C11orf42Q8N5U0 333 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 Q8NA96 180 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 VSTM2AQ8TAG5 236 aa9.61□□□□□ -0.87
CPNE8-203ENST00000538596 IGHV1-8P0DP01 117 aa9.6□□□□□ -0.87
CPNE8-203ENST00000538596 GFRALQ6UXV0 394 aa9.6□□□□□ -0.87
CPNE8-203ENST00000538596 NUDT10Q8NFP7 164 aa9.6□□□□□ -0.87
CPNE8-203ENST00000538596 NUDT11Q96G61 164 aa9.6□□□□□ -0.87
CPNE8-203ENST00000538596 DYNLRB1Q9NP97 96 aa9.6□□□□□ -0.87
CPNE8-203ENST00000538596 NRN1Q9NPD7 142 aa9.6□□□□□ -0.87
CPNE8-203ENST00000538596 IGLC7A0M8Q6 106 aa9.6□□□□□ -0.87
CPNE8-203ENST00000538596 E7EQL1 145 aa9.6□□□□□ -0.87
CPNE8-203ENST00000538596 INS-IGF2F8WCM5 200 aa9.6□□□□□ -0.87
CPNE8-203ENST00000538596 TCAPO15273 167 aa9.6□□□□□ -0.87
CPNE8-203ENST00000538596 PRB4P10163 310 aaPredicted RBP9.6□□□□□ -0.87
CPNE8-203ENST00000538596 Q8N976 141 aa9.6□□□□□ -0.87
CPNE8-203ENST00000538596 SSBP4Q9BWG4 385 aaPredicted RBP9.6□□□□□ -0.87
CPNE8-203ENST00000538596 TNFRSF19Q9NS68 423 aa9.6□□□□□ -0.87
CPNE8-203ENST00000538596 IZUMO1RA6ND01 250 aa9.59□□□□□ -0.87
CPNE8-203ENST00000538596 M0R143 59 aa9.59□□□□□ -0.87
CPNE8-203ENST00000538596 APCSP02743 223 aa9.59□□□□□ -0.87
CPNE8-203ENST00000538596 MT-ND6P03923 174 aa9.59□□□□□ -0.87
CPNE8-203ENST00000538596 RAB4AP20338 218 aa9.59□□□□□ -0.87
CPNE8-203ENST00000538596 SUB1P53999 127 aaKnown RBP eCLIP9.59□□□□□ -0.87
CPNE8-203ENST00000538596 TNXAQ16473 311 aa9.59□□□□□ -0.87
CPNE8-203ENST00000538596 TMEM155Q4W5P6 130 aa9.59□□□□□ -0.87
CPNE8-203ENST00000538596 OR1L4Q8NGR5 311 aa9.59□□□□□ -0.87
CPNE8-203ENST00000538596 SSUH2Q9Y2M2 353 aa9.59□□□□□ -0.87
CPNE8-203ENST00000538596 SHISA9B4DS77 424 aa9.59□□□□□ -0.87
CPNE8-203ENST00000538596 G0S2P27469 103 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms