RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 IL36BQ9NZH7 164 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 MIOXQ9UGB7 285 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 DMRT1Q9Y5R6 373 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 NIPBLQ6KC79 2804 aaeCLIP7.42□□□□□ -1.22
DDB1-211ENST00000538280 ACANP16112 2415 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 YLPM1P49750 1951 aaKnown RBP7.41□□□□□ -1.22
DDB1-211ENST00000538280 GGTLC3B5MD39 225 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 LY6LH3BQJ8 138 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 SLC25A17O43808 307 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 ACTL6BO94805 426 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 PRRX1P54821 245 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 SELENOTP62341 195 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 SSBP2P81877 361 aaPredicted RBP7.41□□□□□ -1.22
DDB1-211ENST00000538280 PRSS8Q16651 343 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 PATE2Q6UY27 113 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 MRPL41Q8IXM3 137 aaKnown RBP7.41□□□□□ -1.22
DDB1-211ENST00000538280 MMD2Q8IY49 270 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 MUC15Q8N387 334 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 OR10D4PQ8NGN7 298 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 OR1L4Q8NGR5 311 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 RITA1Q96K30 269 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 PFDN5Q99471 154 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 HIST1H2BLQ99880 126 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 RNF5Q99942 180 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 CLEC7AQ9BXN2 247 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 GSX1Q9H4S2 264 aaPredicted RBP7.41□□□□□ -1.22
DDB1-211ENST00000538280 MRPL36Q9P0J6 103 aaKnown RBP7.41□□□□□ -1.22
DDB1-211ENST00000538280 SPG11Q96JI7 2443 aa7.41□□□□□ -1.22
DDB1-211ENST00000538280 ANKHD1Q8IWZ3 2542 aaKnown RBP7.4□□□□□ -1.22
DDB1-211ENST00000538280 IGHV1-3A0A0C4DH29 117 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 FAM90A27PA6NNH2 459 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 LINC00587B1AMM8 73 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 BUB1B-PAK6H3BSN5 160 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 IGLV2-8P01709 118 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 RPL27AP46776 148 aaKnown RBP7.4□□□□□ -1.22
DDB1-211ENST00000538280 MFAP2P55001 183 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 MORN5Q5VZ52 161 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 ETFRF1Q6IPR1 90 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 C11orf71Q6IPW1 123 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 OR5T1Q8NG75 326 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 SGMS2Q8NHU3 365 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 IGF2BP2-AS1Q96M15 143 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 TRGV9Q99603 122 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 SPOCK3Q9BQ16 436 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 TMUB1Q9BVT8 246 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 DNAJC4Q9NNZ3 241 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 OSTCQ9NRP0 149 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 AURKAIP1Q9NWT8 199 aaPredicted RBP7.4□□□□□ -1.22
DDB1-211ENST00000538280 AMMECR1Q9Y4X0 333 aaPredicted RBP7.4□□□□□ -1.22
DDB1-211ENST00000538280 V9GYV3 84 aa7.4□□□□□ -1.22
DDB1-211ENST00000538280 FBN3Q75N90 2809 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 ARFGEF3Q5TH69 2177 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 A0A0U1RQK1 487 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 ZNF320A2RRD8 509 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 XKRY2A2RUG3 117 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 TEX22C9J3V5 150 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 LYNX1G3V0Z9 82 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 CORTO00230 105 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 OR7C2O60412 319 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 GCGP01275 180 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 AMBPP02760 352 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 LYNX1P0DP58 116 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 FABP4P15090 132 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 HIST1H1BP16401 226 aaKnown RBP7.39□□□□□ -1.23
DDB1-211ENST00000538280 CRYBB3P26998 211 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 MYCNOSP40205 109 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 COMPP49747 757 aaPredicted RBP7.39□□□□□ -1.23
DDB1-211ENST00000538280 LGALS4P56470 323 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 TAS2R60P59551 318 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 BPIFB3P59826 476 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 PLP1P60201 277 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 CLEC12BQ2HXU8 276 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 CENPWQ5EE01 88 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 OR5R1Q8NH85 324 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 NPIPB3Q92617 1050 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 PACRGQ96M98 296 aaPredicted RBP7.39□□□□□ -1.23
DDB1-211ENST00000538280 SRSF8Q9BRL6 282 aaKnown RBP7.39□□□□□ -1.23
DDB1-211ENST00000538280 PRDM13Q9H4Q3 707 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 SIGLEC9Q9Y336 463 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 AKAP6Q13023 2319 aa7.39□□□□□ -1.23
DDB1-211ENST00000538280 MAP1AP78559 2803 aaPredicted RBP7.38□□□□□ -1.23
DDB1-211ENST00000538280 FLNAP21333 2647 aaKnown RBP7.38□□□□□ -1.23
DDB1-211ENST00000538280 PLCE1Q9P212 2302 aa7.38□□□□□ -1.23
DDB1-211ENST00000538280 IGHV3-72A0A0B4J1Y9 119 aa7.38□□□□□ -1.23
DDB1-211ENST00000538280 TRAV5A0A0B4J249 113 aa7.38□□□□□ -1.23
DDB1-211ENST00000538280 PPIAL4CA0A0B4J2A2 164 aa7.38□□□□□ -1.23
DDB1-211ENST00000538280 HELTA6NFD8 242 aa7.38□□□□□ -1.23
DDB1-211ENST00000538280 C22orf46C9J442 243 aa7.38□□□□□ -1.23
DDB1-211ENST00000538280 COX7A2P2O60397 106 aa7.38□□□□□ -1.23
DDB1-211ENST00000538280 PPIAL4GP0DN37 164 aa7.38□□□□□ -1.23
DDB1-211ENST00000538280 CNTFRP26992 372 aa7.38□□□□□ -1.23
DDB1-211ENST00000538280 CNN1P51911 297 aaKnown RBP7.38□□□□□ -1.23
DDB1-211ENST00000538280 JOSD1Q15040 202 aaPredicted RBP7.38□□□□□ -1.23
DDB1-211ENST00000538280 PDZD11Q5EBL8 140 aa7.38□□□□□ -1.23
DDB1-211ENST00000538280 C10orf113Q5VZT2 155 aa7.38□□□□□ -1.23
DDB1-211ENST00000538280 CDPF1Q6NVV7 123 aa7.38□□□□□ -1.23
DDB1-211ENST00000538280 TMEM116Q8NCL8 245 aa7.38□□□□□ -1.23
DDB1-211ENST00000538280 OR5AU1Q8NGC0 362 aa7.38□□□□□ -1.23
DDB1-211ENST00000538280 OR11H6Q8NGC7 330 aa7.38□□□□□ -1.23
DDB1-211ENST00000538280 OR8B3Q8NGG8 313 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms