RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 PRR25Q96S07 402 aa9.9□□□□□ -0.82
CHFR-216ENST00000538235 ATP6V0BQ99437 205 aa9.9□□□□□ -0.82
CHFR-216ENST00000538235 GPN1Q9HCN4 374 aaPredicted RBP9.9□□□□□ -0.82
CHFR-216ENST00000538235 MLXQ9UH92 298 aa9.9□□□□□ -0.82
CHFR-216ENST00000538235 LSM5Q9Y4Y9 91 aaKnown RBP9.9□□□□□ -0.82
CHFR-216ENST00000538235 U3KQ87 197 aa9.9□□□□□ -0.82
CHFR-216ENST00000538235 PIGBOS1A0A0B4J2F0 54 aa9.89□□□□□ -0.83
CHFR-216ENST00000538235 CORTO00230 105 aa9.89□□□□□ -0.83
CHFR-216ENST00000538235 SCAF4O95104 1147 aaKnown RBP9.89□□□□□ -0.83
CHFR-216ENST00000538235 APOHP02749 345 aaPredicted RBP9.89□□□□□ -0.83
CHFR-216ENST00000538235 GAMTQ14353 236 aa9.89□□□□□ -0.83
CHFR-216ENST00000538235 FCN2Q15485 313 aa9.89□□□□□ -0.83
CHFR-216ENST00000538235 TOMM20LQ6UXN7 152 aa9.89□□□□□ -0.83
CHFR-216ENST00000538235 GSG1LQ6UXU4 331 aa9.89□□□□□ -0.83
CHFR-216ENST00000538235 ACOT7LQ6ZUV0 252 aa9.89□□□□□ -0.83
CHFR-216ENST00000538235 TMEM116Q8NCL8 245 aa9.89□□□□□ -0.83
CHFR-216ENST00000538235 NPIPB3Q92617 1050 aa9.89□□□□□ -0.83
CHFR-216ENST00000538235 ACY3Q96HD9 319 aa9.89□□□□□ -0.83
CHFR-216ENST00000538235 SMIM8Q96KF7 97 aa9.89□□□□□ -0.83
CHFR-216ENST00000538235 PSENENQ9NZ42 101 aa9.89□□□□□ -0.83
CHFR-216ENST00000538235 OR5AC2Q9NZP5 309 aa9.89□□□□□ -0.83
CHFR-216ENST00000538235 MGAT4CQ9UBM8 478 aa9.89□□□□□ -0.83
CHFR-216ENST00000538235 IGHV3-49A0A0A0MS15 119 aa9.88□□□□□ -0.83
CHFR-216ENST00000538235 IGSF23A1L1A6 192 aa9.88□□□□□ -0.83
CHFR-216ENST00000538235 FAM24AA6NFZ4 105 aa9.88□□□□□ -0.83
CHFR-216ENST00000538235 CYB5BO43169 146 aa9.88□□□□□ -0.83
CHFR-216ENST00000538235 GNG7O60262 68 aa9.88□□□□□ -0.83
CHFR-216ENST00000538235 MED6O75586 246 aa9.88□□□□□ -0.83
CHFR-216ENST00000538235 METTL15P1P0C7V9 234 aa9.88□□□□□ -0.83
CHFR-216ENST00000538235 FOLR2P14207 255 aa9.88□□□□□ -0.83
CHFR-216ENST00000538235 SUB1P53999 127 aaKnown RBP eCLIP9.88□□□□□ -0.83
CHFR-216ENST00000538235 SPSB3Q6PJ21 355 aa9.88□□□□□ -0.83
CHFR-216ENST00000538235 TMEM182Q6ZP80 229 aaPredicted RBP9.88□□□□□ -0.83
CHFR-216ENST00000538235 LILRB2Q8N423 598 aa9.88□□□□□ -0.83
CHFR-216ENST00000538235 TXN2Q99757 166 aa9.88□□□□□ -0.83
CHFR-216ENST00000538235 MCRIP2Q9BUT9 160 aaKnown RBP9.88□□□□□ -0.83
CHFR-216ENST00000538235 IGHV3OR16-13A0A075B7E8 117 aa9.87□□□□□ -0.83
CHFR-216ENST00000538235 TRAV14DV4A0A0A6YYC5 116 aa9.87□□□□□ -0.83
CHFR-216ENST00000538235 IGHV3-74A0A0B4J1X5 117 aa9.87□□□□□ -0.83
CHFR-216ENST00000538235 ZNF320A2RRD8 509 aa9.87□□□□□ -0.83
CHFR-216ENST00000538235 NDUFA4O00483 81 aa9.87□□□□□ -0.83
CHFR-216ENST00000538235 IFNA4P05014 189 aa9.87□□□□□ -0.83
CHFR-216ENST00000538235 C8orf88P0DMB2 117 aa9.87□□□□□ -0.83
CHFR-216ENST00000538235 CBLN1P23435 193 aa9.87□□□□□ -0.83
CHFR-216ENST00000538235 S100A10P60903 97 aa9.87□□□□□ -0.83
CHFR-216ENST00000538235 ZNF90Q03938 601 aa9.87□□□□□ -0.83
CHFR-216ENST00000538235 BTNL8Q6UX41 500 aa9.87□□□□□ -0.83
CHFR-216ENST00000538235 STPG3Q8N7X2 389 aa9.87□□□□□ -0.83
CHFR-216ENST00000538235 CIB3Q96Q77 187 aaPredicted RBP9.87□□□□□ -0.83
CHFR-216ENST00000538235 SIGLEC8Q9NYZ4 499 aa9.87□□□□□ -0.83
CHFR-216ENST00000538235 CACFD1Q9UGQ2 172 aa9.87□□□□□ -0.83
CHFR-216ENST00000538235 PUS1Q9Y606 427 aaKnown RBP eCLIP9.87□□□□□ -0.83
CHFR-216ENST00000538235 G3V3Q6 166 aa9.86□□□□□ -0.83
CHFR-216ENST00000538235 SSNA1O43805 119 aa9.86□□□□□ -0.83
CHFR-216ENST00000538235 TSC22D2O75157 780 aa9.86□□□□□ -0.83
CHFR-216ENST00000538235 SLC25A4P12235 298 aa9.86□□□□□ -0.83
CHFR-216ENST00000538235 OR10J1P30954 320 aa9.86□□□□□ -0.83
CHFR-216ENST00000538235 NPBWR1P48145 328 aa9.86□□□□□ -0.83
CHFR-216ENST00000538235 USF2Q15853 346 aaPredicted RBP9.86□□□□□ -0.83
CHFR-216ENST00000538235 DEFB114Q30KQ6 69 aa9.86□□□□□ -0.83
CHFR-216ENST00000538235 CD300EQ496F6 205 aaPredicted RBP9.86□□□□□ -0.83
CHFR-216ENST00000538235 LRRC37A5PQ49AS3 106 aa9.86□□□□□ -0.83
CHFR-216ENST00000538235 Q5BKY6 102 aa9.86□□□□□ -0.83
CHFR-216ENST00000538235 OR8G2PQ6IF36 304 aa9.86□□□□□ -0.83
CHFR-216ENST00000538235 ZNF600Q6ZNG1 722 aa9.86□□□□□ -0.83
CHFR-216ENST00000538235 TMEM61Q8N0U2 210 aa9.86□□□□□ -0.83
CHFR-216ENST00000538235 THAP8Q8NA92 274 aa9.86□□□□□ -0.83
CHFR-216ENST00000538235 RAB40CQ96S21 281 aa9.86□□□□□ -0.83
CHFR-216ENST00000538235 C20orf24Q9BUV8 137 aa9.86□□□□□ -0.83
CHFR-216ENST00000538235 RNF126Q9BV68 326 aa9.86□□□□□ -0.83
CHFR-216ENST00000538235 STRAPQ9Y3F4 350 aaKnown RBP9.86□□□□□ -0.83
CHFR-216ENST00000538235 RPS10-NUDT3A0A1W2PQS6 291 aa9.85□□□□□ -0.83
CHFR-216ENST00000538235 ZNF785A8K8V0 405 aa9.85□□□□□ -0.83
CHFR-216ENST00000538235 NUPL2O15504 423 aaKnown RBP9.85□□□□□ -0.83
CHFR-216ENST00000538235 DEDDO75618 318 aa9.85□□□□□ -0.83
CHFR-216ENST00000538235 TAS2R30P59541 319 aa9.85□□□□□ -0.83
CHFR-216ENST00000538235 RRAS2P62070 204 aaPredicted RBP9.85□□□□□ -0.83
CHFR-216ENST00000538235 PPP1R1CQ8WVI7 109 aa9.85□□□□□ -0.83
CHFR-216ENST00000538235 NMES1Q9C002 83 aa9.85□□□□□ -0.83
CHFR-216ENST00000538235 COL7A1Q02388 2944 aa9.85□□□□□ -0.83
CHFR-216ENST00000538235 HUWE1Q7Z6Z7 4374 aaKnown RBP9.84□□□□□ -0.83
CHFR-216ENST00000538235 IGHV3-66A0A0C4DH42 116 aa9.84□□□□□ -0.83
CHFR-216ENST00000538235 CST7O76096 145 aa9.84□□□□□ -0.83
CHFR-216ENST00000538235 IFNA7P01567 189 aa9.84□□□□□ -0.83
CHFR-216ENST00000538235 GATA2P23769 480 aaPredicted RBP9.84□□□□□ -0.83
CHFR-216ENST00000538235 GPX4P36969 197 aaPredicted RBP9.84□□□□□ -0.83
CHFR-216ENST00000538235 RAB14P61106 215 aa9.84□□□□□ -0.83
CHFR-216ENST00000538235 FAM106AQ4KMX7 169 aa9.84□□□□□ -0.83
CHFR-216ENST00000538235 IQCF2Q8IXL9 164 aa9.84□□□□□ -0.83
CHFR-216ENST00000538235 OR1S2Q8NGQ3 325 aa9.84□□□□□ -0.83
CHFR-216ENST00000538235 ST8SIA2Q92186 375 aa9.84□□□□□ -0.83
CHFR-216ENST00000538235 ELOVL1Q9BW60 279 aa9.84□□□□□ -0.83
CHFR-216ENST00000538235 WFDC10AQ9H1F0 79 aa9.84□□□□□ -0.83
CHFR-216ENST00000538235 DAZ1Q9NQZ3 744 aaKnown RBP9.84□□□□□ -0.83
CHFR-216ENST00000538235 LYRM2Q9NU23 88 aaPredicted RBP9.84□□□□□ -0.83
CHFR-216ENST00000538235 PEMTQ9UBM1 199 aa9.84□□□□□ -0.83
CHFR-216ENST00000538235 ZNF256Q9Y2P7 627 aaPredicted RBP9.84□□□□□ -0.83
CHFR-216ENST00000538235 IGHV7-4-1A0A0J9YVY3 117 aa9.83□□□□□ -0.84
CHFR-216ENST00000538235 LINC00862A6NCI5 91 aa9.83□□□□□ -0.84
CHFR-216ENST00000538235 TOMM40O96008 361 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms