RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 OR2T8A6NH00 312 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 SCAF4O95104 1147 aaKnown RBP12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 CD28P10747 220 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 KRTAP10-3P60369 221 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 Q56UQ5 140 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 ETFRF1Q6IPR1 90 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 CLEC19AQ6UXS0 136 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 TMEM182Q6ZP80 229 aaPredicted RBP12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 TMEM116Q8NCL8 245 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 OR4X1Q8NH49 305 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 GNB4Q9HAV0 340 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 NPVFQ9HCQ7 196 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 IFNA5P01569 189 aa12.12□□□□□ -0.47
SFSWAP-206ENST00000537582 ELANEP08246 267 aa12.12□□□□□ -0.47
SFSWAP-206ENST00000537582 M6PRP20645 277 aa12.12□□□□□ -0.47
SFSWAP-206ENST00000537582 GPR183P32249 361 aa12.12□□□□□ -0.47
SFSWAP-206ENST00000537582 ZNF90Q03938 601 aa12.12□□□□□ -0.47
SFSWAP-206ENST00000537582 KRTAP24-1Q3LI83 254 aa12.12□□□□□ -0.47
SFSWAP-206ENST00000537582 TMEM144Q7Z5S9 345 aa12.12□□□□□ -0.47
SFSWAP-206ENST00000537582 RNF152Q8N8N0 203 aa12.12□□□□□ -0.47
SFSWAP-206ENST00000537582 MYOZ3Q8TDC0 251 aa12.12□□□□□ -0.47
SFSWAP-206ENST00000537582 VN1R17PQ8TDU5 208 aa12.12□□□□□ -0.47
SFSWAP-206ENST00000537582 EEF1AKMT3Q96AZ1 226 aa12.12□□□□□ -0.47
SFSWAP-206ENST00000537582 BORCS7-ASMTA0A0B4J1R7 106 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 TMEM89A2RUT3 159 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 KRBOX1C9JBD0 128 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 PPP5D1E7EU14 171 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 FNDC10F2Z333 226 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 JTBO76095 146 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 IGLC1P0CG04 106 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 GATA2P23769 480 aaPredicted RBP12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 ATP6V0CP27449 155 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 OR10J1P30954 320 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 MFAP4P55083 255 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 ZNF266Q14584 549 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 TIGITQ495A1 244 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 TEPPQ6URK8 271 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 ZNF491Q8N8L2 437 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 THAP8Q8NA92 274 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 ZNF414Q96IQ9 312 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 CHRDL1Q9BU40 450 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 ARV1Q9H2C2 271 aa12.11□□□□□ -0.47
SFSWAP-206ENST00000537582 ZFP92A6NM28 416 aa12.1□□□□□ -0.47
SFSWAP-206ENST00000537582 AGPAT2O15120 278 aa12.1□□□□□ -0.47
SFSWAP-206ENST00000537582 CLN5O75503 358 aa12.1□□□□□ -0.47
SFSWAP-206ENST00000537582 IGKV1-17P01599 117 aa12.1□□□□□ -0.47
SFSWAP-206ENST00000537582 CLEC3BP05452 202 aa12.1□□□□□ -0.47
SFSWAP-206ENST00000537582 SCGB1C1Q8TD33 95 aa12.1□□□□□ -0.47
SFSWAP-206ENST00000537582 USMG5Q96IX5 58 aa12.1□□□□□ -0.47
SFSWAP-206ENST00000537582 GINS3Q9BRX5 216 aa12.1□□□□□ -0.47
SFSWAP-206ENST00000537582 GGTLC1Q9BX51 225 aa12.1□□□□□ -0.47
SFSWAP-206ENST00000537582 NPCDR1Q9BY65 106 aa12.1□□□□□ -0.47
SFSWAP-206ENST00000537582 PLA2G2EQ9NZK7 142 aa12.1□□□□□ -0.47
SFSWAP-206ENST00000537582 IGHV3-35A0A0C4DH35 117 aa12.09□□□□□ -0.47
SFSWAP-206ENST00000537582 GNG7O60262 68 aa12.09□□□□□ -0.47
SFSWAP-206ENST00000537582 TPT1P13693 172 aaKnown RBP12.09□□□□□ -0.47
SFSWAP-206ENST00000537582 ADMP35318 185 aa12.09□□□□□ -0.47
SFSWAP-206ENST00000537582 KHDC1LQ5JSQ8 128 aa12.09□□□□□ -0.47
SFSWAP-206ENST00000537582 BAP18Q8IXM2 172 aa12.09□□□□□ -0.47
SFSWAP-206ENST00000537582 OR4X2Q8NGF9 303 aa12.09□□□□□ -0.47
SFSWAP-206ENST00000537582 FBN1P35555 2871 aaKnown RBP12.09□□□□□ -0.47
SFSWAP-206ENST00000537582 CTSGP08311 255 aa12.09□□□□□ -0.47
SFSWAP-206ENST00000537582 NPBWR1P48145 328 aa12.09□□□□□ -0.47
SFSWAP-206ENST00000537582 CAMLGP49069 296 aa12.09□□□□□ -0.47
SFSWAP-206ENST00000537582 MIC13Q5XKP0 118 aa12.09□□□□□ -0.47
SFSWAP-206ENST00000537582 ZNF343Q6P1L6 599 aa12.09□□□□□ -0.47
SFSWAP-206ENST00000537582 TMED6Q8WW62 240 aa12.09□□□□□ -0.47
SFSWAP-206ENST00000537582 CITED2Q99967 270 aaPredicted RBP12.09□□□□□ -0.47
SFSWAP-206ENST00000537582 PARD6GQ9BYG4 376 aaPredicted RBP12.09□□□□□ -0.47
SFSWAP-206ENST00000537582 ATRQ13535 2644 aa12.08□□□□□ -0.48
SFSWAP-206ENST00000537582 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.08□□□□□ -0.48
SFSWAP-206ENST00000537582 TRBV7-1A0A0A6YYK4 115 aa12.08□□□□□ -0.48
SFSWAP-206ENST00000537582 A0A0G2JLM5 398 aa12.08□□□□□ -0.48
SFSWAP-206ENST00000537582 A0A1W2PRX2 142 aa12.08□□□□□ -0.48
SFSWAP-206ENST00000537582 DEFB136Q30KP8 78 aa12.08□□□□□ -0.48
SFSWAP-206ENST00000537582 CYP2G1PQ6ZSU1 146 aa12.08□□□□□ -0.48
SFSWAP-206ENST00000537582 COMMD1Q8N668 190 aa12.08□□□□□ -0.48
SFSWAP-206ENST00000537582 BPIFCQ8NFQ6 507 aa12.08□□□□□ -0.48
SFSWAP-206ENST00000537582 SLC45A2Q9UMX9 530 aa12.08□□□□□ -0.48
SFSWAP-206ENST00000537582 TCRBV4S1A1TA0A5B7 111 aa12.07□□□□□ -0.48
SFSWAP-206ENST00000537582 FCGR2BP31994 310 aaPredicted RBP12.07□□□□□ -0.48
SFSWAP-206ENST00000537582 ELLP55199 621 aaPredicted RBP12.07□□□□□ -0.48
SFSWAP-206ENST00000537582 GCSAMLQ5JQS6 135 aa12.07□□□□□ -0.48
SFSWAP-206ENST00000537582 FAM74A1Q5RGS3 127 aa12.07□□□□□ -0.48
SFSWAP-206ENST00000537582 SUN5Q8TC36 379 aa12.07□□□□□ -0.48
SFSWAP-206ENST00000537582 UBE2E2Q96LR5 201 aa12.07□□□□□ -0.48
SFSWAP-206ENST00000537582 LINC00052Q96N35 136 aa12.07□□□□□ -0.48
SFSWAP-206ENST00000537582 TRGV9Q99603 122 aa12.07□□□□□ -0.48
SFSWAP-206ENST00000537582 TXN2Q99757 166 aa12.07□□□□□ -0.48
SFSWAP-206ENST00000537582 TENM1Q9UKZ4 2725 aa12.06□□□□□ -0.48
SFSWAP-206ENST00000537582 IGHV3OR16-8A0A075B7F1 116 aa12.06□□□□□ -0.48
SFSWAP-206ENST00000537582 BMPR1BO00238 502 aa12.06□□□□□ -0.48
SFSWAP-206ENST00000537582 TGOLN2O43493 480 aa12.06□□□□□ -0.48
SFSWAP-206ENST00000537582 LINC00869P0C866 280 aa12.06□□□□□ -0.48
SFSWAP-206ENST00000537582 SPP1P10451 314 aa12.06□□□□□ -0.48
SFSWAP-206ENST00000537582 EIF5AP63241 154 aaKnown RBP12.06□□□□□ -0.48
SFSWAP-206ENST00000537582 STPG3Q8N7X2 389 aa12.06□□□□□ -0.48
SFSWAP-206ENST00000537582 DUX3Q96PT4 197 aa12.06□□□□□ -0.48
SFSWAP-206ENST00000537582 VSIRQ9H7M9 311 aa12.06□□□□□ -0.48
SFSWAP-206ENST00000537582 PXMP4Q9Y6I8 212 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms