RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 LHFPL4Q7Z7J7 247 aa12.49□□□□□ -0.41
MKS1-204ENST00000537529 NPBQ8NG41 125 aa12.49□□□□□ -0.41
MKS1-204ENST00000537529 SGMS2Q8NHU3 365 aa12.49□□□□□ -0.41
MKS1-204ENST00000537529 OOSP1A8MZH6 123 aa12.48□□□□□ -0.41
MKS1-204ENST00000537529 NDUFA3O95167 84 aa12.48□□□□□ -0.41
MKS1-204ENST00000537529 ACTL10Q5JWF8 245 aa12.48□□□□□ -0.41
MKS1-204ENST00000537529 OR1B1Q8NGR6 318 aa12.48□□□□□ -0.41
MKS1-204ENST00000537529 GAR1Q9NY12 217 aaKnown RBP12.48□□□□□ -0.41
MKS1-204ENST00000537529 PITPNC1Q9UKF7 332 aa12.48□□□□□ -0.41
MKS1-204ENST00000537529 IGHV3-21A0A0B4J1V1 117 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 IFITM10A6NMD0 228 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 PYYP10082 97 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 ORM2P19652 201 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 TIGITQ495A1 244 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 RUSC1-AS1Q66K80 236 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 HIST3H2BBQ8N257 126 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 KALRNO60229 2985 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 TRAV9-1A0A075B6T8 112 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 A0A0U1RQK1 487 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 A0A1W2PRD5 423 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 A0A1W2PRF3 423 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 A0A1W2PRM7 423 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 ZNF320A2RRD8 509 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 HYPMO75409 117 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 HES1Q14469 280 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 MINOS1Q5TGZ0 78 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 OR1L6Q8NGR2 347 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 FXYD5Q96DB9 178 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 IL36BQ9NZH7 164 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 DMRT1Q9Y5R6 373 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 MINOS1-NBL1R4GNA1 71 aa12.47□□□□□ -0.41
MKS1-204ENST00000537529 NDUFS7O75251 213 aa12.46□□□□□ -0.41
MKS1-204ENST00000537529 HOXB4P17483 251 aaPredicted RBP12.46□□□□□ -0.41
MKS1-204ENST00000537529 WNT10AQ9GZT5 417 aa12.46□□□□□ -0.41
MKS1-204ENST00000537529 ATRXP46100 2492 aa12.46□□□□□ -0.41
MKS1-204ENST00000537529 I3L2K1 104 aa12.46□□□□□ -0.42
MKS1-204ENST00000537529 ZFP36P26651 326 aaKnown RBP12.46□□□□□ -0.42
MKS1-204ENST00000537529 PLP1P60201 277 aa12.46□□□□□ -0.42
MKS1-204ENST00000537529 ERVFC1-1P60608 527 aa12.46□□□□□ -0.42
MKS1-204ENST00000537529 LGALS4P56470 323 aa12.45□□□□□ -0.42
MKS1-204ENST00000537529 TAS2R60P59551 318 aa12.45□□□□□ -0.42
MKS1-204ENST00000537529 S100A12P80511 92 aa12.45□□□□□ -0.42
MKS1-204ENST00000537529 FXYD3Q14802 87 aa12.45□□□□□ -0.42
MKS1-204ENST00000537529 C5orf64Q2M2E5 130 aa12.45□□□□□ -0.42
MKS1-204ENST00000537529 GFI1BQ5VTD9 330 aa12.45□□□□□ -0.42
MKS1-204ENST00000537529 ZNF329Q86UD4 541 aa12.45□□□□□ -0.42
MKS1-204ENST00000537529 IGF2BP2-AS1Q96M15 143 aa12.45□□□□□ -0.42
MKS1-204ENST00000537529 TMEM8BA6NDV4 472 aa12.44□□□□□ -0.42
MKS1-204ENST00000537529 C19orf84I3L1E1 186 aa12.44□□□□□ -0.42
MKS1-204ENST00000537529 FABP1P07148 127 aa12.44□□□□□ -0.42
MKS1-204ENST00000537529 IGLC1P0CG04 106 aa12.44□□□□□ -0.42
MKS1-204ENST00000537529 CNN1P51911 297 aaKnown RBP12.44□□□□□ -0.42
MKS1-204ENST00000537529 GPR61Q9BZJ8 451 aa12.44□□□□□ -0.42
MKS1-204ENST00000537529 SIRPDQ9H106 197 aa12.44□□□□□ -0.42
MKS1-204ENST00000537529 CDC42EP3Q9UKI2 254 aa12.44□□□□□ -0.42
MKS1-204ENST00000537529 CD24P25063 80 aa12.44□□□□□ -0.42
MKS1-204ENST00000537529 RPL15P61313 204 aaKnown RBP12.44□□□□□ -0.42
MKS1-204ENST00000537529 OR5I1Q13606 314 aa12.44□□□□□ -0.42
MKS1-204ENST00000537529 RPEL1Q2QD12 228 aa12.44□□□□□ -0.42
MKS1-204ENST00000537529 PDZD11Q5EBL8 140 aa12.44□□□□□ -0.42
MKS1-204ENST00000537529 TMEM183AQ8IXX5 376 aa12.44□□□□□ -0.42
MKS1-204ENST00000537529 NIT2Q9NQR4 276 aa12.44□□□□□ -0.42
MKS1-204ENST00000537529 HIGD1AQ9Y241 93 aa12.44□□□□□ -0.42
MKS1-204ENST00000537529 NAV3Q8IVL0 2385 aa12.44□□□□□ -0.42
MKS1-204ENST00000537529 SPTBN4Q9H254 2564 aa12.43□□□□□ -0.42
MKS1-204ENST00000537529 IGHV2-70DA0A0C4DH43 119 aa12.43□□□□□ -0.42
MKS1-204ENST00000537529 XKRY2A2RUG3 117 aa12.43□□□□□ -0.42
MKS1-204ENST00000537529 SLC17A3O00476 420 aa12.43□□□□□ -0.42
MKS1-204ENST00000537529 PEX7O00628 323 aa12.43□□□□□ -0.42
MKS1-204ENST00000537529 GCGP01275 180 aa12.43□□□□□ -0.42
MKS1-204ENST00000537529 RASL11BQ9BPW5 248 aa12.43□□□□□ -0.42
MKS1-204ENST00000537529 OSTCQ9NRP0 149 aa12.43□□□□□ -0.42
MKS1-204ENST00000537529 TRAPPC1Q9Y5R8 145 aa12.43□□□□□ -0.42
MKS1-204ENST00000537529 V9GYV3 84 aa12.43□□□□□ -0.42
MKS1-204ENST00000537529 ABCA4P78363 2273 aa12.42□□□□□ -0.42
MKS1-204ENST00000537529 COA6Q5JTJ3 125 aaKnown RBP12.42□□□□□ -0.42
MKS1-204ENST00000537529 IGFBPL1Q8WX77 278 aa12.42□□□□□ -0.42
MKS1-204ENST00000537529 GSX1Q9H4S2 264 aaPredicted RBP12.42□□□□□ -0.42
MKS1-204ENST00000537529 TBL2Q9Y4P3 447 aaKnown RBP12.42□□□□□ -0.42
MKS1-204ENST00000537529 SMG1Q96Q15 3661 aaKnown RBP12.42□□□□□ -0.42
MKS1-204ENST00000537529 K7EIM0 57 aa12.42□□□□□ -0.42
MKS1-204ENST00000537529 LYZP61626 148 aa12.42□□□□□ -0.42
MKS1-204ENST00000537529 DYNAPQ8N1N2 210 aa12.42□□□□□ -0.42
MKS1-204ENST00000537529 OR10D4PQ8NGN7 298 aa12.42□□□□□ -0.42
MKS1-204ENST00000537529 TPRP12270 2363 aaKnown RBP12.42□□□□□ -0.42
MKS1-204ENST00000537529 ISLRO14498 428 aa12.41□□□□□ -0.42
MKS1-204ENST00000537529 TOX4O94842 621 aa12.41□□□□□ -0.42
MKS1-204ENST00000537529 IGLV2-8P01709 118 aa12.41□□□□□ -0.42
MKS1-204ENST00000537529 MGST1P10620 155 aaKnown RBP12.41□□□□□ -0.42
MKS1-204ENST00000537529 PSG1P11464 419 aa12.41□□□□□ -0.42
MKS1-204ENST00000537529 EBI3Q14213 229 aa12.41□□□□□ -0.42
MKS1-204ENST00000537529 Q8N6K4 173 aa12.41□□□□□ -0.42
MKS1-204ENST00000537529 ARPC1AQ92747 370 aa12.41□□□□□ -0.42
MKS1-204ENST00000537529 NPIPB5A8MRT5 1133 aa12.41□□□□□ -0.42
MKS1-204ENST00000537529 GP9P14770 177 aa12.41□□□□□ -0.42
MKS1-204ENST00000537529 FABP4P15090 132 aa12.41□□□□□ -0.42
MKS1-204ENST00000537529 MYCNOSP40205 109 aa12.41□□□□□ -0.42
MKS1-204ENST00000537529 ZNF562Q6V9R5 426 aa12.41□□□□□ -0.42
MKS1-204ENST00000537529 BLNKQ8WV28 456 aa12.41□□□□□ -0.42
MKS1-204ENST00000537529 RBM14Q96PK6 669 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms