RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 IAPPP10997 89 aa10.59□□□□□ -0.71
UBE3B-206ENST00000536398 IL7P13232 177 aa10.59□□□□□ -0.71
UBE3B-206ENST00000536398 TCF24Q7RTU0 167 aa10.59□□□□□ -0.71
UBE3B-206ENST00000536398 WFDC3Q8IUB2 231 aa10.59□□□□□ -0.71
UBE3B-206ENST00000536398 APRG1Q8IVJ8 170 aa10.59□□□□□ -0.71
UBE3B-206ENST00000536398 GINS3Q9BRX5 216 aa10.59□□□□□ -0.71
UBE3B-206ENST00000536398 GGTLC1Q9BX51 225 aa10.59□□□□□ -0.71
UBE3B-206ENST00000536398 U3KQ87 197 aa10.59□□□□□ -0.71
UBE3B-206ENST00000536398 C9orf170A2RU37 121 aa10.58□□□□□ -0.72
UBE3B-206ENST00000536398 NAP1L6A6NFF2 107 aa10.58□□□□□ -0.72
UBE3B-206ENST00000536398 OR4C46A6NHA9 309 aa10.58□□□□□ -0.72
UBE3B-206ENST00000536398 ANXA7P20073 488 aaKnown RBP10.58□□□□□ -0.72
UBE3B-206ENST00000536398 OR10J1P30954 320 aa10.58□□□□□ -0.72
UBE3B-206ENST00000536398 GGNBP1Q5YKI7 109 aa10.58□□□□□ -0.72
UBE3B-206ENST00000536398 OR1S2Q8NGQ3 325 aa10.58□□□□□ -0.72
UBE3B-206ENST00000536398 ACY3Q96HD9 319 aa10.58□□□□□ -0.72
UBE3B-206ENST00000536398 MAGT1Q9H0U3 335 aa10.58□□□□□ -0.72
UBE3B-206ENST00000536398 CACFD1Q9UGQ2 172 aa10.58□□□□□ -0.72
UBE3B-206ENST00000536398 CSMD3Q7Z407 3707 aa10.57□□□□□ -0.72
UBE3B-206ENST00000536398 TRAV30A0A087WSZ9 112 aa10.57□□□□□ -0.72
UBE3B-206ENST00000536398 MPTX1A8MV57 137 aa10.57□□□□□ -0.72
UBE3B-206ENST00000536398 PLA2G10O15496 165 aa10.57□□□□□ -0.72
UBE3B-206ENST00000536398 ADAP1O75689 374 aa10.57□□□□□ -0.72
UBE3B-206ENST00000536398 SLC25A4P12235 298 aa10.57□□□□□ -0.72
UBE3B-206ENST00000536398 RPL35AP18077 110 aaKnown RBP10.57□□□□□ -0.72
UBE3B-206ENST00000536398 NPPCP23582 126 aa10.57□□□□□ -0.72
UBE3B-206ENST00000536398 CASC10Q5T4H9 136 aa10.57□□□□□ -0.72
UBE3B-206ENST00000536398 ZFAND6Q6FIF0 208 aa10.57□□□□□ -0.72
UBE3B-206ENST00000536398 MS4A6AQ9H2W1 248 aa10.57□□□□□ -0.72
UBE3B-206ENST00000536398 IFNA4P05014 189 aa10.56□□□□□ -0.72
UBE3B-206ENST00000536398 SLC25A6P12236 298 aa10.56□□□□□ -0.72
UBE3B-206ENST00000536398 LYL1P12980 280 aa10.56□□□□□ -0.72
UBE3B-206ENST00000536398 CRYBB3P26998 211 aa10.56□□□□□ -0.72
UBE3B-206ENST00000536398 RPL11P62913 178 aaKnown RBP10.56□□□□□ -0.72
UBE3B-206ENST00000536398 DHRS2Q13268 280 aa10.56□□□□□ -0.72
UBE3B-206ENST00000536398 NOXA1Q86UR1 476 aa10.56□□□□□ -0.72
UBE3B-206ENST00000536398 FAM24BQ8N5W8 94 aa10.56□□□□□ -0.72
UBE3B-206ENST00000536398 METTL26Q96S19 204 aa10.56□□□□□ -0.72
UBE3B-206ENST00000536398 OVOL2Q9BRP0 275 aa10.56□□□□□ -0.72
UBE3B-206ENST00000536398 TMED3Q9Y3Q3 217 aa10.56□□□□□ -0.72
UBE3B-206ENST00000536398 OR4E1P0C645 316 aa10.55□□□□□ -0.72
UBE3B-206ENST00000536398 UBE2MP61081 183 aaKnown RBP10.55□□□□□ -0.72
UBE3B-206ENST00000536398 YPEL3P61236 119 aaPredicted RBP10.55□□□□□ -0.72
UBE3B-206ENST00000536398 GAMTQ14353 236 aa10.55□□□□□ -0.72
UBE3B-206ENST00000536398 USF2Q15853 346 aaPredicted RBP10.55□□□□□ -0.72
UBE3B-206ENST00000536398 ETFRF1Q6IPR1 90 aa10.55□□□□□ -0.72
UBE3B-206ENST00000536398 Q8WTZ3 238 aa10.55□□□□□ -0.72
UBE3B-206ENST00000536398 MAP6D1Q9H9H5 199 aa10.55□□□□□ -0.72
UBE3B-206ENST00000536398 PAIP2BQ9ULR5 123 aaKnown RBP10.55□□□□□ -0.72
UBE3B-206ENST00000536398 U3KQE9 123 aa10.55□□□□□ -0.72
UBE3B-206ENST00000536398 IGKV1D-37A0A075B6S9 117 aa10.54□□□□□ -0.72
UBE3B-206ENST00000536398 CENPXA8MT69 81 aa10.54□□□□□ -0.72
UBE3B-206ENST00000536398 DNASE2O00115 360 aaPredicted RBP10.54□□□□□ -0.72
UBE3B-206ENST00000536398 WRBO00258 174 aa10.54□□□□□ -0.72
UBE3B-206ENST00000536398 SCGB2A1O75556 95 aa10.54□□□□□ -0.72
UBE3B-206ENST00000536398 P2RY1P47900 373 aa10.54□□□□□ -0.72
UBE3B-206ENST00000536398 C4orf46Q504U0 113 aa10.54□□□□□ -0.72
UBE3B-206ENST00000536398 LYG2Q86SG7 212 aa10.54□□□□□ -0.72
UBE3B-206ENST00000536398 C7orf50Q9BRJ6 194 aaKnown RBP10.54□□□□□ -0.72
UBE3B-206ENST00000536398 SACSQ9NZJ4 4579 aa10.54□□□□□ -0.72
UBE3B-206ENST00000536398 DYNC2H1Q8NCM8 4307 aaKnown RBP10.54□□□□□ -0.72
UBE3B-206ENST00000536398 RYR2Q92736 4967 aa10.54□□□□□ -0.72
UBE3B-206ENST00000536398 PIGBOS1A0A0B4J2F0 54 aa10.53□□□□□ -0.72
UBE3B-206ENST00000536398 FAM90A26D6RGX4 464 aa10.53□□□□□ -0.72
UBE3B-206ENST00000536398 LYRM1O43325 122 aa10.53□□□□□ -0.72
UBE3B-206ENST00000536398 SYNGR2O43760 224 aa10.53□□□□□ -0.72
UBE3B-206ENST00000536398 TOMM40O96008 361 aa10.53□□□□□ -0.72
UBE3B-206ENST00000536398 IL4P05112 153 aa10.53□□□□□ -0.72
UBE3B-206ENST00000536398 RD3LP0DJH9 198 aa10.53□□□□□ -0.72
UBE3B-206ENST00000536398 PSG1P11464 419 aa10.53□□□□□ -0.72
UBE3B-206ENST00000536398 BMI1P35226 326 aa10.53□□□□□ -0.72
UBE3B-206ENST00000536398 GPX4P36969 197 aaPredicted RBP10.53□□□□□ -0.72
UBE3B-206ENST00000536398 PAFAH1B2P68402 229 aa10.53□□□□□ -0.72
UBE3B-206ENST00000536398 ZNF90Q03938 601 aa10.53□□□□□ -0.72
UBE3B-206ENST00000536398 LEMD1Q68G75 181 aa10.53□□□□□ -0.72
UBE3B-206ENST00000536398 RABAC1Q9UI14 185 aa10.53□□□□□ -0.72
UBE3B-206ENST00000536398 A0A1W2PS18 150 aa10.52□□□□□ -0.73
UBE3B-206ENST00000536398 A6NHS1 94 aa10.52□□□□□ -0.73
UBE3B-206ENST00000536398 H3BP45 60 aa10.52□□□□□ -0.73
UBE3B-206ENST00000536398 MED6O75586 246 aa10.52□□□□□ -0.73
UBE3B-206ENST00000536398 CD5P06127 495 aa10.52□□□□□ -0.73
UBE3B-206ENST00000536398 ATP5IP56385 69 aaPredicted RBP10.52□□□□□ -0.73
UBE3B-206ENST00000536398 DEFB131AP59861 70 aa10.52□□□□□ -0.73
UBE3B-206ENST00000536398 POLR2GP62487 172 aaKnown RBP eCLIP10.52□□□□□ -0.73
UBE3B-206ENST00000536398 ID3Q02535 119 aa10.52□□□□□ -0.73
UBE3B-206ENST00000536398 DEFB135Q30KP9 77 aa10.52□□□□□ -0.73
UBE3B-206ENST00000536398 CNPY1Q3B7I2 92 aa10.52□□□□□ -0.73
UBE3B-206ENST00000536398 SPANXN5Q5MJ07 72 aa10.52□□□□□ -0.73
UBE3B-206ENST00000536398 C16orf54Q6UWD8 224 aa10.52□□□□□ -0.73
UBE3B-206ENST00000536398 STXBP6Q8NFX7 210 aa10.52□□□□□ -0.73
UBE3B-206ENST00000536398 OR51G1Q8NGK1 321 aa10.52□□□□□ -0.73
UBE3B-206ENST00000536398 COQ8AQ8NI60 647 aa10.52□□□□□ -0.73
UBE3B-206ENST00000536398 SLC35E1Q96K37 410 aa10.52□□□□□ -0.73
UBE3B-206ENST00000536398 TMEM231Q9H6L2 316 aa10.52□□□□□ -0.73
UBE3B-206ENST00000536398 IGKV1OR2-108A0A075B7D4 117 aa10.51□□□□□ -0.73
UBE3B-206ENST00000536398 ZFP92A6NM28 416 aa10.51□□□□□ -0.73
UBE3B-206ENST00000536398 PRSS46E5RG02 174 aa10.51□□□□□ -0.73
UBE3B-206ENST00000536398 HNRNPCP07910 306 aaKnown RBP eCLIP10.51□□□□□ -0.73
UBE3B-206ENST00000536398 APOC4P55056 127 aa10.51□□□□□ -0.73
UBE3B-206ENST00000536398 RAB11AP62491 216 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms