RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 PPP1R14BQ96C90 147 aa9.71□□□□□ -0.86
CLSTN3-205ENST00000535452 HRH4Q9H3N8 390 aa9.71□□□□□ -0.86
CLSTN3-205ENST00000535452 CACNG5Q9UF02 275 aa9.71□□□□□ -0.86
CLSTN3-205ENST00000535452 TBC1D24Q9ULP9 559 aa9.71□□□□□ -0.86
CLSTN3-205ENST00000535452 STARD9Q9P2P6 4700 aa9.7□□□□□ -0.86
CLSTN3-205ENST00000535452 TRAV10A0A0B4J240 114 aa9.7□□□□□ -0.86
CLSTN3-205ENST00000535452 DEFB4AO15263 64 aa9.7□□□□□ -0.86
CLSTN3-205ENST00000535452 CDS2O95674 445 aa9.7□□□□□ -0.86
CLSTN3-205ENST00000535452 CD74P04233 296 aa9.7□□□□□ -0.86
CLSTN3-205ENST00000535452 IL4P05112 153 aa9.7□□□□□ -0.86
CLSTN3-205ENST00000535452 RD3LP0DJH9 198 aa9.7□□□□□ -0.86
CLSTN3-205ENST00000535452 FAUP35544 74 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-205ENST00000535452 RND2P52198 227 aa9.7□□□□□ -0.86
CLSTN3-205ENST00000535452 YPEL3P61236 119 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-205ENST00000535452 SRPXP78539 464 aa9.7□□□□□ -0.86
CLSTN3-205ENST00000535452 C2orf83Q53S99 150 aa9.7□□□□□ -0.86
CLSTN3-205ENST00000535452 PSMG4Q5JS54 123 aa9.7□□□□□ -0.86
CLSTN3-205ENST00000535452 ACY3Q96HD9 319 aa9.7□□□□□ -0.86
CLSTN3-205ENST00000535452 DIRAS2Q96HU8 199 aa9.7□□□□□ -0.86
CLSTN3-205ENST00000535452 MCUBQ9NWR8 336 aa9.7□□□□□ -0.86
CLSTN3-205ENST00000535452 CSMD3Q7Z407 3707 aa9.69□□□□□ -0.86
CLSTN3-205ENST00000535452 K7EQG2 157 aa9.69□□□□□ -0.86
CLSTN3-205ENST00000535452 ID1P41134 155 aa9.69□□□□□ -0.86
CLSTN3-205ENST00000535452 ATP5IP56385 69 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-205ENST00000535452 CLVS1Q8IUQ0 354 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-205ENST00000535452 COQ8AQ8NI60 647 aa9.69□□□□□ -0.86
CLSTN3-205ENST00000535452 SLC35E1Q96K37 410 aa9.69□□□□□ -0.86
CLSTN3-205ENST00000535452 U3KQ87 197 aa9.69□□□□□ -0.86
CLSTN3-205ENST00000535452 ZFP92A6NM28 416 aa9.68□□□□□ -0.86
CLSTN3-205ENST00000535452 DEDDO75618 318 aa9.68□□□□□ -0.86
CLSTN3-205ENST00000535452 AKR1C4P17516 323 aa9.68□□□□□ -0.86
CLSTN3-205ENST00000535452 RAB11AP62491 216 aa9.68□□□□□ -0.86
CLSTN3-205ENST00000535452 RPP30P78346 268 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-205ENST00000535452 SAMD13Q5VXD3 122 aa9.68□□□□□ -0.86
CLSTN3-205ENST00000535452 SIGLEC15Q6ZMC9 328 aa9.68□□□□□ -0.86
CLSTN3-205ENST00000535452 TRPT1Q86TN4 253 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-205ENST00000535452 RPP25LQ8N5L8 163 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-205ENST00000535452 IL22RA2Q969J5 263 aa9.68□□□□□ -0.86
CLSTN3-205ENST00000535452 PBDC1Q9BVG4 233 aa9.68□□□□□ -0.86
CLSTN3-205ENST00000535452 MRPS26Q9BYN8 205 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-205ENST00000535452 SEPSECSQ9HD40 501 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-205ENST00000535452 NRN1Q9NPD7 142 aa9.68□□□□□ -0.86
CLSTN3-205ENST00000535452 RSL24D1Q9UHA3 163 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-205ENST00000535452 LYSTQ99698 3801 aa9.68□□□□□ -0.86
CLSTN3-205ENST00000535452 IGHV4-28A0A0C4DH34 117 aa9.67□□□□□ -0.86
CLSTN3-205ENST00000535452 KNCNA6PVL3 124 aa9.67□□□□□ -0.86
CLSTN3-205ENST00000535452 P0C879 139 aa9.67□□□□□ -0.86
CLSTN3-205ENST00000535452 IGLC1P0CG04 106 aa9.67□□□□□ -0.86
CLSTN3-205ENST00000535452 CCR6P51684 374 aa9.67□□□□□ -0.86
CLSTN3-205ENST00000535452 PVRIGQ6DKI7 326 aa9.67□□□□□ -0.86
CLSTN3-205ENST00000535452 PRSS54Q6PEW0 395 aa9.67□□□□□ -0.86
CLSTN3-205ENST00000535452 SELENOHQ8IZQ5 122 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-205ENST00000535452 LGI3Q8N145 548 aa9.67□□□□□ -0.86
CLSTN3-205ENST00000535452 OR4D10Q8NGI6 311 aa9.67□□□□□ -0.86
CLSTN3-205ENST00000535452 OR51G1Q8NGK1 321 aa9.67□□□□□ -0.86
CLSTN3-205ENST00000535452 OR1S1Q8NH92 325 aa9.67□□□□□ -0.86
CLSTN3-205ENST00000535452 SMIM4Q8WVI0 70 aa9.67□□□□□ -0.86
CLSTN3-205ENST00000535452 NPIPB3Q92617 1050 aa9.67□□□□□ -0.86
CLSTN3-205ENST00000535452 FNDC4Q9H6D8 234 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-205ENST00000535452 PAIP2BQ9ULR5 123 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-205ENST00000535452 TMEM189A5PLL7 270 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 CRYM-AS1A6NIL9 109 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 NXPH3O95157 252 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 TOMM40O96008 361 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 IGKV1-17P01599 117 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 HLA-DMBP28068 263 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 AP3S2P59780 193 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 KLF9Q13886 244 aaPredicted RBP9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 SMCO1Q147U7 214 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 CTF1Q16619 201 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 BSXQ3C1V8 233 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 FAAP20Q6NZ36 180 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 C16orf54Q6UWD8 224 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 LILRB2Q8N423 598 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 FAM24BQ8N5W8 94 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 DTD1Q8TEA8 209 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 GLYATL2Q8WU03 294 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 RAB2BQ8WUD1 216 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 GPR146Q96CH1 333 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 RAB40CQ96S21 281 aa9.66□□□□□ -0.86
CLSTN3-205ENST00000535452 ALMS1Q8TCU4 4167 aa9.65□□□□□ -0.86
CLSTN3-205ENST00000535452 A0A0B4J2A0 478 aa9.65□□□□□ -0.86
CLSTN3-205ENST00000535452 TEX48A0A1B0GUV7 120 aa9.65□□□□□ -0.86
CLSTN3-205ENST00000535452 SNRPGP15A8MWD9 76 aa9.65□□□□□ -0.86
CLSTN3-205ENST00000535452 CTDSPLO15194 276 aa9.65□□□□□ -0.86
CLSTN3-205ENST00000535452 MED6O75586 246 aa9.65□□□□□ -0.86
CLSTN3-205ENST00000535452 MLANAQ16655 118 aa9.65□□□□□ -0.86
CLSTN3-205ENST00000535452 EBLN2Q6P2I7 272 aa9.65□□□□□ -0.86
CLSTN3-205ENST00000535452 OR51S1Q8NGJ8 323 aa9.65□□□□□ -0.86
CLSTN3-205ENST00000535452 OR4C16Q8NGL9 310 aa9.65□□□□□ -0.86
CLSTN3-205ENST00000535452 DCANP1Q8TF63 244 aa9.65□□□□□ -0.86
CLSTN3-205ENST00000535452 RNF125Q96EQ8 232 aa9.65□□□□□ -0.86
CLSTN3-205ENST00000535452 CLEC5AQ9NY25 188 aa9.65□□□□□ -0.86
CLSTN3-205ENST00000535452 SHPKQ9UHJ6 478 aa9.65□□□□□ -0.86
CLSTN3-205ENST00000535452 TMEM56-RWDD3S4R434 201 aa9.65□□□□□ -0.86
CLSTN3-205ENST00000535452 A0A0G2JRQ6 117 aa9.64□□□□□ -0.87
CLSTN3-205ENST00000535452 ZNF705EA8MWA4 302 aaPredicted RBP9.64□□□□□ -0.87
CLSTN3-205ENST00000535452 CFDP00746 253 aaPredicted RBP9.64□□□□□ -0.87
CLSTN3-205ENST00000535452 P0DMU3 169 aa9.64□□□□□ -0.87
CLSTN3-205ENST00000535452 FAM231AP0DMU4 169 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms