RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 SCGB3A2Q96PL1 93 aa11.9□□□□□ -0.5
CLSTN3-204ENST00000535313 RARRES2Q99969 163 aa11.9□□□□□ -0.5
CLSTN3-204ENST00000535313 CACFD1Q9UGQ2 172 aa11.9□□□□□ -0.5
CLSTN3-204ENST00000535313 SCP2D1Q9UJQ7 156 aa11.9□□□□□ -0.5
CLSTN3-204ENST00000535313 KCNIP3Q9Y2W7 256 aa11.9□□□□□ -0.5
CLSTN3-204ENST00000535313 LY6G6CO95867 125 aa11.89□□□□□ -0.51
CLSTN3-204ENST00000535313 IGKV1-17P01599 117 aa11.89□□□□□ -0.51
CLSTN3-204ENST00000535313 SLC25A4P12235 298 aa11.89□□□□□ -0.51
CLSTN3-204ENST00000535313 CRYBB3P26998 211 aa11.89□□□□□ -0.51
CLSTN3-204ENST00000535313 P2RY1P47900 373 aa11.89□□□□□ -0.51
CLSTN3-204ENST00000535313 TIGITQ495A1 244 aa11.89□□□□□ -0.51
CLSTN3-204ENST00000535313 C2orf83Q53S99 150 aa11.89□□□□□ -0.51
CLSTN3-204ENST00000535313 LEMD1Q68G75 181 aa11.89□□□□□ -0.51
CLSTN3-204ENST00000535313 SLC24A4Q8NFF2 622 aa11.89□□□□□ -0.51
CLSTN3-204ENST00000535313 STXBP6Q8NFX7 210 aa11.89□□□□□ -0.51
CLSTN3-204ENST00000535313 RNASEH2CQ8TDP1 164 aaKnown RBP11.89□□□□□ -0.51
CLSTN3-204ENST00000535313 GRAMD2BQ96HH9 432 aa11.89□□□□□ -0.51
CLSTN3-204ENST00000535313 SDHCQ99643 169 aaPredicted RBP11.89□□□□□ -0.51
CLSTN3-204ENST00000535313 BATF3Q9NR55 127 aa11.89□□□□□ -0.51
CLSTN3-204ENST00000535313 TMEM56-RWDD3S4R434 201 aa11.89□□□□□ -0.51
CLSTN3-204ENST00000535313 ANKRD20A5PA0PJZ0 165 aa11.88□□□□□ -0.51
CLSTN3-204ENST00000535313 GSTZ1O43708 216 aaPredicted RBP11.88□□□□□ -0.51
CLSTN3-204ENST00000535313 CA1P00915 261 aaPredicted RBP11.88□□□□□ -0.51
CLSTN3-204ENST00000535313 ETFRF1Q6IPR1 90 aa11.88□□□□□ -0.51
CLSTN3-204ENST00000535313 PRSS54Q6PEW0 395 aa11.88□□□□□ -0.51
CLSTN3-204ENST00000535313 NOXA1Q86UR1 476 aa11.88□□□□□ -0.51
CLSTN3-204ENST00000535313 STHQ8IWL8 128 aa11.88□□□□□ -0.51
CLSTN3-204ENST00000535313 OR1S2Q8NGQ3 325 aa11.88□□□□□ -0.51
CLSTN3-204ENST00000535313 OR11H2Q8NH07 326 aa11.88□□□□□ -0.51
CLSTN3-204ENST00000535313 Q8WTZ3 238 aa11.88□□□□□ -0.51
CLSTN3-204ENST00000535313 IL22RA2Q969J5 263 aa11.88□□□□□ -0.51
CLSTN3-204ENST00000535313 TRIM63Q969Q1 353 aa11.88□□□□□ -0.51
CLSTN3-204ENST00000535313 MCUBQ9NWR8 336 aa11.88□□□□□ -0.51
CLSTN3-204ENST00000535313 BIRC6Q9NR09 4857 aa11.88□□□□□ -0.51
CLSTN3-204ENST00000535313 FABP12A6NFH5 140 aa11.87□□□□□ -0.51
CLSTN3-204ENST00000535313 SULT1A3P0DMM9 295 aa11.87□□□□□ -0.51
CLSTN3-204ENST00000535313 SULT1A4P0DMN0 295 aa11.87□□□□□ -0.51
CLSTN3-204ENST00000535313 OR10J1P30954 320 aa11.87□□□□□ -0.51
CLSTN3-204ENST00000535313 EIF2B2P49770 351 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-204ENST00000535313 RND2P52198 227 aa11.87□□□□□ -0.51
CLSTN3-204ENST00000535313 TMEM187Q14656 261 aa11.87□□□□□ -0.51
CLSTN3-204ENST00000535313 FAM24BQ8N5W8 94 aa11.87□□□□□ -0.51
CLSTN3-204ENST00000535313 SRRQ9GZT4 340 aa11.87□□□□□ -0.51
CLSTN3-204ENST00000535313 K7EQG2 157 aa11.86□□□□□ -0.51
CLSTN3-204ENST00000535313 NXPH3O95157 252 aa11.86□□□□□ -0.51
CLSTN3-204ENST00000535313 IGLC1P0CG04 106 aa11.86□□□□□ -0.51
CLSTN3-204ENST00000535313 NPY1RP25929 384 aa11.86□□□□□ -0.51
CLSTN3-204ENST00000535313 YPEL3P61236 119 aaPredicted RBP11.86□□□□□ -0.51
CLSTN3-204ENST00000535313 PHLDA1Q8WV24 401 aaPredicted RBP11.86□□□□□ -0.51
CLSTN3-204ENST00000535313 HELTA6NFD8 242 aa11.85□□□□□ -0.51
CLSTN3-204ENST00000535313 HNRNPCP07910 306 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLSTN3-204ENST00000535313 ANXA3P12429 323 aa11.85□□□□□ -0.51
CLSTN3-204ENST00000535313 AKR1C4P17516 323 aa11.85□□□□□ -0.51
CLSTN3-204ENST00000535313 RBMS2Q15434 407 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-204ENST00000535313 NMSQ5H8A3 153 aa11.85□□□□□ -0.51
CLSTN3-204ENST00000535313 C11orf45Q8TAV5 145 aa11.85□□□□□ -0.51
CLSTN3-204ENST00000535313 MFFQ9GZY8 342 aa11.85□□□□□ -0.51
CLSTN3-204ENST00000535313 C11orf68Q9H3H3 251 aaKnown RBP11.85□□□□□ -0.51
CLSTN3-204ENST00000535313 PRR13Q9NZ81 148 aa11.85□□□□□ -0.51
CLSTN3-204ENST00000535313 PTTG2Q9NZH5 202 aa11.85□□□□□ -0.51
CLSTN3-204ENST00000535313 A0A0B4J2A0 478 aa11.84□□□□□ -0.51
CLSTN3-204ENST00000535313 IFNA10P01566 189 aa11.84□□□□□ -0.51
CLSTN3-204ENST00000535313 ZNF688P0C7X2 276 aa11.84□□□□□ -0.51
CLSTN3-204ENST00000535313 S100A5P33763 92 aa11.84□□□□□ -0.51
CLSTN3-204ENST00000535313 CCR6P51684 374 aa11.84□□□□□ -0.51
CLSTN3-204ENST00000535313 AP2S1P53680 142 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-204ENST00000535313 SRPXP78539 464 aa11.84□□□□□ -0.51
CLSTN3-204ENST00000535313 SMCO1Q147U7 214 aa11.84□□□□□ -0.51
CLSTN3-204ENST00000535313 NPIPB3Q92617 1050 aa11.84□□□□□ -0.51
CLSTN3-204ENST00000535313 ACY3Q96HD9 319 aa11.84□□□□□ -0.51
CLSTN3-204ENST00000535313 SHPKQ9UHJ6 478 aa11.84□□□□□ -0.51
CLSTN3-204ENST00000535313 U3KQ87 197 aa11.84□□□□□ -0.51
CLSTN3-204ENST00000535313 PIGBOS1A0A0B4J2F0 54 aa11.83□□□□□ -0.52
CLSTN3-204ENST00000535313 IFNA4P05014 189 aa11.83□□□□□ -0.52
CLSTN3-204ENST00000535313 IL4P05112 153 aa11.83□□□□□ -0.52
CLSTN3-204ENST00000535313 RD3LP0DJH9 198 aa11.83□□□□□ -0.52
CLSTN3-204ENST00000535313 FAUP35544 74 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-204ENST00000535313 DHRS2Q13268 280 aa11.83□□□□□ -0.52
CLSTN3-204ENST00000535313 BAK1Q16611 211 aa11.83□□□□□ -0.52
CLSTN3-204ENST00000535313 TMEM41BQ5BJD5 291 aa11.83□□□□□ -0.52
CLSTN3-204ENST00000535313 MORN3Q6PF18 240 aaPredicted RBP11.83□□□□□ -0.52
CLSTN3-204ENST00000535313 LGI3Q8N145 548 aa11.83□□□□□ -0.52
CLSTN3-204ENST00000535313 DCANP1Q8TF63 244 aa11.83□□□□□ -0.52
CLSTN3-204ENST00000535313 TMEM170AQ8WVE7 144 aa11.83□□□□□ -0.52
CLSTN3-204ENST00000535313 HSPB7Q9UBY9 170 aa11.83□□□□□ -0.52
CLSTN3-204ENST00000535313 FBXL17Q9UF56 701 aa11.83□□□□□ -0.52
CLSTN3-204ENST00000535313 U3KQE9 123 aa11.83□□□□□ -0.52
CLSTN3-204ENST00000535313 SPP1P10451 314 aa11.82□□□□□ -0.52
CLSTN3-204ENST00000535313 NANOS2P60321 138 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-204ENST00000535313 KLF9Q13886 244 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-204ENST00000535313 C16orf54Q6UWD8 224 aa11.82□□□□□ -0.52
CLSTN3-204ENST00000535313 LYZL2Q7Z4W2 148 aa11.82□□□□□ -0.52
CLSTN3-204ENST00000535313 TRPT1Q86TN4 253 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-204ENST00000535313 DTD1Q8TEA8 209 aa11.82□□□□□ -0.52
CLSTN3-204ENST00000535313 KNCNA6PVL3 124 aa11.81□□□□□ -0.52
CLSTN3-204ENST00000535313 DEFB4AO15263 64 aa11.81□□□□□ -0.52
CLSTN3-204ENST00000535313 TOMM40O96008 361 aa11.81□□□□□ -0.52
CLSTN3-204ENST00000535313 AP3S2P59780 193 aa11.81□□□□□ -0.52
CLSTN3-204ENST00000535313 SUPT4H1P63272 117 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-204ENST00000535313 USF2Q15853 346 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms