RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SCGB2A2Q13296 93 aa9.84□□□□□ -0.83
SCARB1-204ENST00000535005 EBI3Q14213 229 aa9.84□□□□□ -0.83
SCARB1-204ENST00000535005 DEFB112Q30KQ8 113 aa9.84□□□□□ -0.83
SCARB1-204ENST00000535005 PDPNQ86YL7 162 aa9.84□□□□□ -0.83
SCARB1-204ENST00000535005 OR51H1Q8NH63 302 aa9.84□□□□□ -0.83
SCARB1-204ENST00000535005 TAF15Q92804 592 aaKnown RBP eCLIP9.84□□□□□ -0.832e-6■■■□□ 15
SCARB1-204ENST00000535005 SLC35D1Q9NTN3 355 aa9.84□□□□□ -0.83
SCARB1-204ENST00000535005 NAGKQ9UJ70 344 aa9.84□□□□□ -0.83
SCARB1-204ENST00000535005 WASHC3Q9Y3C0 194 aa9.84□□□□□ -0.83
SCARB1-204ENST00000535005 SVEP1Q4LDE5 3571 aa9.84□□□□□ -0.83
SCARB1-204ENST00000535005 PAFAH1B2P68402 229 aa9.84□□□□□ -0.83
SCARB1-204ENST00000535005 TMEM267Q0VDI3 215 aaPredicted RBP9.84□□□□□ -0.83
SCARB1-204ENST00000535005 RTL8BQ17RB0 113 aa9.84□□□□□ -0.83
SCARB1-204ENST00000535005 ZNF585BQ52M93 769 aa9.84□□□□□ -0.83
SCARB1-204ENST00000535005 TXNDC17Q9BRA2 123 aa9.84□□□□□ -0.83
SCARB1-204ENST00000535005 FCGR3BO75015 233 aa9.83□□□□□ -0.84
SCARB1-204ENST00000535005 TMEM177Q53S58 311 aa9.83□□□□□ -0.84
SCARB1-204ENST00000535005 PIFOQ8TCI5 191 aa9.83□□□□□ -0.84
SCARB1-204ENST00000535005 C22orf15Q8WYQ4 148 aa9.83□□□□□ -0.84
SCARB1-204ENST00000535005 ZNF48Q96MX3 618 aaPredicted RBP9.83□□□□□ -0.84
SCARB1-204ENST00000535005 RNF5Q99942 180 aa9.83□□□□□ -0.84
SCARB1-204ENST00000535005 PARLQ9H300 379 aa9.83□□□□□ -0.84
SCARB1-204ENST00000535005 FUT9Q9Y231 359 aa9.83□□□□□ -0.84
SCARB1-204ENST00000535005 IGHV3-72A0A0B4J1Y9 119 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 DLEU1O43261 78 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 PDE6DO43924 150 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 ESDP10768 282 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 FOXL1Q12952 345 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 Q6YL49 198 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 TMEM144Q7Z5S9 345 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 OR4S2Q8NH73 311 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 TMEM147Q9BVK8 224 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 MDFIC2A0A1B0GVS7 189 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 A0A1W2PPQ1 181 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 INAFM1C9JVW0 142 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 F6UZH7 168 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 RAMP3O60896 148 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 HPRT1P00492 218 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 FAM106CPP0CH98 169 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 SRD5A1P18405 259 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 FGF8P55075 233 aaPredicted RBP9.82□□□□□ -0.84
SCARB1-204ENST00000535005 RPL15P61313 204 aaKnown RBP9.82□□□□□ -0.84
SCARB1-204ENST00000535005 SLC38A11Q08AI6 406 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 TEX38Q6PEX7 206 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 TMEM14EPQ6UXP3 125 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 Q71RC1 249 aaPredicted RBP9.82□□□□□ -0.84
SCARB1-204ENST00000535005 SSX7Q7RTT5 188 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 Q8N6K4 173 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 OR4C13Q8NGP0 309 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 OSR1Q8TAX0 266 aaPredicted RBP9.82□□□□□ -0.84
SCARB1-204ENST00000535005 FLYWCH2Q96CP2 140 aaKnown RBP9.82□□□□□ -0.84
SCARB1-204ENST00000535005 EAF1Q96JC9 268 aaPredicted RBP9.82□□□□□ -0.84
SCARB1-204ENST00000535005 VSIRQ9H7M9 311 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 CACNG5Q9UF02 275 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 GOLT1BQ9Y3E0 138 aa9.82□□□□□ -0.84
SCARB1-204ENST00000535005 CRLF1O75462 422 aa9.81□□□□□ -0.84
SCARB1-204ENST00000535005 SCGB1D1O95968 90 aa9.81□□□□□ -0.84
SCARB1-204ENST00000535005 MOSP00540 346 aa9.81□□□□□ -0.84
SCARB1-204ENST00000535005 IGKV1D-33P01593 117 aa9.81□□□□□ -0.84
SCARB1-204ENST00000535005 IGKV1-33P01594 117 aa9.81□□□□□ -0.84
SCARB1-204ENST00000535005 IGKV1-16P04430 117 aa9.81□□□□□ -0.84
SCARB1-204ENST00000535005 IER3P46695 156 aa9.81□□□□□ -0.84
SCARB1-204ENST00000535005 LGALS7P47929 136 aa9.81□□□□□ -0.84
SCARB1-204ENST00000535005 HAPLN4Q86UW8 402 aa9.81□□□□□ -0.84
SCARB1-204ENST00000535005 ZDHHC16Q969W1 377 aa9.81□□□□□ -0.84
SCARB1-204ENST00000535005 OR4C12Q96R67 309 aa9.81□□□□□ -0.84
SCARB1-204ENST00000535005 MIEN1Q9BRT3 115 aa9.81□□□□□ -0.84
SCARB1-204ENST00000535005 PXMP4Q9Y6I8 212 aa9.81□□□□□ -0.84
SCARB1-204ENST00000535005 FN1P02751 2386 aaKnown RBP9.81□□□□□ -0.84
SCARB1-204ENST00000535005 A0A0G2JRQ6 117 aa9.8□□□□□ -0.84
SCARB1-204ENST00000535005 IGKV1-39P01597 117 aa9.8□□□□□ -0.84
SCARB1-204ENST00000535005 IGKV1D-39P04432 117 aa9.8□□□□□ -0.84
SCARB1-204ENST00000535005 ZNF25P17030 456 aaPredicted RBP9.8□□□□□ -0.84
SCARB1-204ENST00000535005 POU2AF1Q16633 256 aa9.8□□□□□ -0.84
SCARB1-204ENST00000535005 TEX43Q6ZNM6 134 aa9.8□□□□□ -0.84
SCARB1-204ENST00000535005 RPP25LQ8N5L8 163 aaKnown RBP9.8□□□□□ -0.84
SCARB1-204ENST00000535005 TMEM86BQ8N661 226 aa9.8□□□□□ -0.84
SCARB1-204ENST00000535005 SIGLECL1Q8N7X8 197 aa9.8□□□□□ -0.84
SCARB1-204ENST00000535005 SSMEM1Q8WWF3 244 aa9.8□□□□□ -0.84
SCARB1-204ENST00000535005 TMEM37Q8WXS4 190 aa9.8□□□□□ -0.84
SCARB1-204ENST00000535005 RPUSD4Q96CM3 377 aaKnown RBP9.8□□□□□ -0.84
SCARB1-204ENST00000535005 MS4A10Q96PG2 267 aa9.8□□□□□ -0.84
SCARB1-204ENST00000535005 A6NDX4 124 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 H3BP45 60 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 H3BUX3 64 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 S1PR2O95136 353 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 MDKP21741 143 aaPredicted RBP9.79□□□□□ -0.84
SCARB1-204ENST00000535005 CD24P25063 80 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 TPPP2P59282 170 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 YPEL3P61236 119 aaPredicted RBP9.79□□□□□ -0.84
SCARB1-204ENST00000535005 SELENOTP62341 195 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 ARL16Q0P5N6 197 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 TMEM183BQ1AE95 376 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 NECAP1Q8NC96 275 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 OR4F5Q8NH21 305 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 RITA1Q96K30 269 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 OR4F4Q96R69 305 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 TCF19Q9Y242 345 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 TRAPPC1Q9Y5R8 145 aa9.79□□□□□ -0.84
SCARB1-204ENST00000535005 C17orf112F2Z3M2 114 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms