RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 SULT1A3P0DMM9 295 aa6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 SULT1A4P0DMN0 295 aa6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 RNASE2P10153 161 aaKnown RBP6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 ANXA3P12429 323 aa6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 NPBWR1P48145 328 aa6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 SPCS3P61009 180 aa6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 KLF9Q13886 244 aaPredicted RBP6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 TMEM187Q14656 261 aa6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 ZNF79Q15937 498 aa6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 ANKRD55Q3KP44 614 aa6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 LYZL2Q7Z4W2 148 aa6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 FAM219AQ8IW50 185 aa6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 GBGT1Q8N5D6 347 aa6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 TMEM116Q8NCL8 245 aa6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 TXN2Q99757 166 aa6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 TM2D3Q9BRN9 247 aa6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 RBM38Q9H0Z9 239 aaKnown RBP6.69□□□□□ -1.34
CCDC90B-219ENST00000534753 TRAV14DV4A0A0A6YYC5 116 aa6.68□□□□□ -1.34
CCDC90B-219ENST00000534753 A8MZ25 164 aa6.68□□□□□ -1.34
CCDC90B-219ENST00000534753 C8orf88P0DMB2 117 aa6.68□□□□□ -1.34
CCDC90B-219ENST00000534753 ICAM4Q14773 271 aa6.68□□□□□ -1.34
CCDC90B-219ENST00000534753 TRIQKQ629K1 86 aa6.68□□□□□ -1.34
CCDC90B-219ENST00000534753 ZFAND6Q6FIF0 208 aa6.68□□□□□ -1.34
CCDC90B-219ENST00000534753 CCDC190Q86UF4 302 aa6.68□□□□□ -1.34
CCDC90B-219ENST00000534753 OR1S1Q8NH92 325 aa6.68□□□□□ -1.34
CCDC90B-219ENST00000534753 TRIM63Q969Q1 353 aa6.68□□□□□ -1.34
CCDC90B-219ENST00000534753 RNF2Q99496 336 aa6.68□□□□□ -1.34
CCDC90B-219ENST00000534753 RHPN1-AS1Q9BWJ2 59 aa6.68□□□□□ -1.34
CCDC90B-219ENST00000534753 HIPK2Q9H2X6 1198 aa6.68□□□□□ -1.34
CCDC90B-219ENST00000534753 SMPXQ9UHP9 88 aa6.68□□□□□ -1.34
CCDC90B-219ENST00000534753 PAIP2BQ9ULR5 123 aaKnown RBP6.68□□□□□ -1.34
CCDC90B-219ENST00000534753 PUS1Q9Y606 427 aaKnown RBP eCLIP6.68□□□□□ -1.34
CCDC90B-219ENST00000534753 TMEM56-RWDD3S4R434 201 aa6.68□□□□□ -1.34
CCDC90B-219ENST00000534753 TRAV25A0A0B4J276 109 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 IGHV7-4-1A0A0J9YVY3 117 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 C15orf62A8K5M9 175 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 K7EMT4 169 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 CORTO00230 105 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 TMEM50AO95807 157 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 IFNA10P01566 189 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 LYL1P12980 280 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 HTR2BP41595 481 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 CCR6P51684 374 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 SUPT4H1P63272 117 aaKnown RBP6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 TIGITQ495A1 244 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 TOMM20LQ6UXN7 152 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 LGI3Q8N145 548 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 MUC7Q8TAX7 377 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 ATP6V0BQ99437 205 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 GINS3Q9BRX5 216 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 RBKSQ9H477 322 aa6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 FNDC4Q9H6D8 234 aaPredicted RBP6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 MRPL36Q9P0J6 103 aaKnown RBP6.67□□□□□ -1.34
CCDC90B-219ENST00000534753 LOC102724200A0A096LPH7 203 aaPredicted RBP6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 A0A0B4J2A0 478 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 RPS10-NUDT3A0A1W2PQS6 291 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 OR4C46A6NHA9 309 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 ZNF701M0R085 212 aaPredicted RBP6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 CHEK1O14757 476 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 TSPAN4O14817 238 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 SCGB2A1O75556 95 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 APOHP02749 345 aaPredicted RBP6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 RPL35AP18077 110 aaKnown RBP6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 BTF3P20290 206 aaKnown RBP6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 FCGR2BP31994 310 aaPredicted RBP6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 RND2P52198 227 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 SRPXP78539 464 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 SMCO1Q147U7 214 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 ZNF600Q6ZNG1 722 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 TCF24Q7RTU0 167 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 SLC24A4Q8NFF2 622 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 OR52E5Q8NH55 327 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 DTD1Q8TEA8 209 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 IL22RA2Q969J5 263 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 GALNT14Q96FL9 552 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 ACY3Q96HD9 319 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 SPAG8Q99932 426 aaPredicted RBP6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 GGTLC1Q9BX51 225 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 SHPKQ9UHJ6 478 aa6.66□□□□□ -1.34
CCDC90B-219ENST00000534753 A0A1B0GU03 582 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 INS-IGF2F8WCM5 200 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 C3orf84H3BNL1 204 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 DNASE2O00115 360 aaPredicted RBP6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 CLN5O75503 358 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 IFNA4P05014 189 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 HOXB5P09067 269 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 IAPPP10997 89 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 NPPCP23582 126 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 NPY1RP25929 384 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 TNFRSF9Q07011 255 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 PPP1R1AQ13522 171 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 BAK1Q16611 211 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 TMEM128Q5BJH2 165 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 APRG1Q8IVJ8 170 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 CENPSQ8N2Z9 138 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 ZNF414Q96IQ9 312 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 OR10C1Q96KK4 312 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 SLC25A21Q9BQT8 299 aaPredicted RBP6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 SRRQ9GZT4 340 aa6.65□□□□□ -1.34
CCDC90B-219ENST00000534753 RABAC1Q9UI14 185 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms