RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	TBC1D24	Q9ULP9	559 aa		10.89	□□□□□ -0.67
CTSB-231	ENST00000534382	TRAV6	A0A075B6T7	132 aa		10.88	□□□□□ -0.67
CTSB-231	ENST00000534382	FAM240B	A0A1B0GVZ2	78 aa		10.88	□□□□□ -0.67
CTSB-231	ENST00000534382	MPTX1	A8MV57	137 aa		10.88	□□□□□ -0.67
CTSB-231	ENST00000534382	OR11H12	B2RN74	326 aa		10.88	□□□□□ -0.67
CTSB-231	ENST00000534382	UPK1B	O75841	260 aa		10.88	□□□□□ -0.67
CTSB-231	ENST00000534382	IGLC1	P0CG04	106 aa		10.88	□□□□□ -0.67
CTSB-231	ENST00000534382	OR10J1	P30954	320 aa		10.88	□□□□□ -0.67
CTSB-231	ENST00000534382	ID3	Q02535	119 aa		10.88	□□□□□ -0.67
CTSB-231	ENST00000534382	ASAH1	Q13510	395 aa		10.88	□□□□□ -0.67
CTSB-231	ENST00000534382	OR1S2	Q8NGQ3	325 aa		10.88	□□□□□ -0.67
CTSB-231	ENST00000534382	RNF2	Q99496	336 aa		10.88	□□□□□ -0.67
CTSB-231	ENST00000534382	MAGT1	Q9H0U3	335 aa		10.88	□□□□□ -0.67
CTSB-231	ENST00000534382	NUDT15	Q9NV35	164 aa		10.88	□□□□□ -0.67
CTSB-231	ENST00000534382	IGHV3-49	A0A0A0MS15	119 aa		10.87	□□□□□ -0.67
CTSB-231	ENST00000534382	WRB	O00258	174 aa		10.87	□□□□□ -0.67
CTSB-231	ENST00000534382	BMI1	P35226	326 aa		10.87	□□□□□ -0.67
CTSB-231	ENST00000534382	GPX4	P36969	197 aa	Predicted RBP	10.87	□□□□□ -0.67
CTSB-231	ENST00000534382	YPEL3	P61236	119 aa	Predicted RBP	10.87	□□□□□ -0.67
CTSB-231	ENST00000534382	RAB11A	P62491	216 aa		10.87	□□□□□ -0.67
CTSB-231	ENST00000534382	RPP30	P78346	268 aa	Known RBP	10.87	□□□□□ -0.67
CTSB-231	ENST00000534382	DEFB125	Q8N687	156 aa		10.87	□□□□□ -0.67
CTSB-231	ENST00000534382	OR4D5	Q8NGN0	318 aa		10.87	□□□□□ -0.67
CTSB-231	ENST00000534382	ACY3	Q96HD9	319 aa		10.87	□□□□□ -0.67
CTSB-231	ENST00000534382		U3KQK5	164 aa		10.87	□□□□□ -0.67
CTSB-231	ENST00000534382	H2AFB2	P0C5Z0	115 aa		10.86	□□□□□ -0.67
CTSB-231	ENST00000534382	NPPC	P23582	126 aa		10.86	□□□□□ -0.67
CTSB-231	ENST00000534382	NKX2-1	P43699	371 aa	Predicted RBP	10.86	□□□□□ -0.67
CTSB-231	ENST00000534382	ZNF431	Q8TF32	576 aa	Predicted RBP	10.86	□□□□□ -0.67
CTSB-231	ENST00000534382		Q8WTZ3	238 aa		10.86	□□□□□ -0.67
CTSB-231	ENST00000534382	WFDC10A	Q9H1F0	79 aa		10.86	□□□□□ -0.67
CTSB-231	ENST00000534382	VSIR	Q9H7M9	311 aa		10.86	□□□□□ -0.67
CTSB-231	ENST00000534382	PAIP2B	Q9ULR5	123 aa	Known RBP	10.86	□□□□□ -0.67
CTSB-231	ENST00000534382	COL7A1	Q02388	2944 aa		10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	IGHV3OR16-13	A0A075B7E8	117 aa		10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	IGHV3-74	A0A0B4J1X5	117 aa		10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	APOH	P02749	345 aa	Predicted RBP	10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	CD5	P06127	495 aa		10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	POLR2G	P62487	172 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	IFITM3	Q01628	133 aa		10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	GAMT	Q14353	236 aa		10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	IAH1	Q2TAA2	248 aa	Predicted RBP	10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	FAM90A2P	Q658T7	463 aa		10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	ST8SIA2	Q92186	375 aa		10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	SLC35E1	Q96K37	410 aa		10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	METTL26	Q96S19	204 aa		10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	SEC22C	Q9BRL7	303 aa		10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	TM2D3	Q9BRN9	247 aa		10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	ZMAT4	Q9H898	229 aa		10.85	□□□□□ -0.67
CTSB-231	ENST00000534382	SRD5A3	Q9H8P0	318 aa		10.85	□□□□□ -0.67
CTSB-231	ENST00000534382		A0A1W2PS18	150 aa		10.84	□□□□□ -0.67
CTSB-231	ENST00000534382	OR4C46	A6NHA9	309 aa		10.84	□□□□□ -0.67
CTSB-231	ENST00000534382	RD3L	P0DJH9	198 aa		10.84	□□□□□ -0.67
CTSB-231	ENST00000534382	CRYBB3	P26998	211 aa		10.84	□□□□□ -0.67
CTSB-231	ENST00000534382	HAGH	Q16775	308 aa		10.84	□□□□□ -0.67
CTSB-231	ENST00000534382	SPANXN5	Q5MJ07	72 aa		10.84	□□□□□ -0.67
CTSB-231	ENST00000534382	LCE2D	Q5TA82	110 aa	Predicted RBP	10.84	□□□□□ -0.67
CTSB-231	ENST00000534382	LILRB2	Q8N423	598 aa		10.84	□□□□□ -0.67
CTSB-231	ENST00000534382	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.84	□□□□□ -0.67
CTSB-231	ENST00000534382	TMEM231	Q9H6L2	316 aa		10.84	□□□□□ -0.67
CTSB-231	ENST00000534382	GSKIP	Q9P0R6	139 aa		10.84	□□□□□ -0.67
CTSB-231	ENST00000534382	STRAP	Q9Y3F4	350 aa	Known RBP	10.84	□□□□□ -0.67
CTSB-231	ENST00000534382	IGHV3-66	A0A0C4DH42	116 aa		10.83	□□□□□ -0.68
CTSB-231	ENST00000534382	RBMY1B	A6NDE4	496 aa	Known RBP	10.83	□□□□□ -0.68
CTSB-231	ENST00000534382	RBMY1E	A6NEQ0	496 aa	Known RBP	10.83	□□□□□ -0.68
CTSB-231	ENST00000534382	TOMM40	O96008	361 aa		10.83	□□□□□ -0.68
CTSB-231	ENST00000534382	RBMY1D	P0C7P1	496 aa	Known RBP	10.83	□□□□□ -0.68
CTSB-231	ENST00000534382	TCF24	Q7RTU0	167 aa		10.83	□□□□□ -0.68
CTSB-231	ENST00000534382	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.83	□□□□□ -0.68
CTSB-231	ENST00000534382	NARS2	Q96I59	477 aa	Known RBP	10.83	□□□□□ -0.68
CTSB-231	ENST00000534382	PSENEN	Q9NZ42	101 aa		10.83	□□□□□ -0.68
CTSB-231	ENST00000534382	IGKV3-7	A0A075B6H7	116 aa		10.82	□□□□□ -0.68
CTSB-231	ENST00000534382	ZFP92	A6NM28	416 aa		10.82	□□□□□ -0.68
CTSB-231	ENST00000534382	PRSS46	E5RG02	174 aa		10.82	□□□□□ -0.68
CTSB-231	ENST00000534382		H3BP45	60 aa		10.82	□□□□□ -0.68
CTSB-231	ENST00000534382	SSSCA1	O60232	199 aa		10.82	□□□□□ -0.68
CTSB-231	ENST00000534382	DFFB	O76075	338 aa		10.82	□□□□□ -0.68
CTSB-231	ENST00000534382	SCGB1D2	O95969	90 aa		10.82	□□□□□ -0.68
CTSB-231	ENST00000534382	PSG1	P11464	419 aa		10.82	□□□□□ -0.68
CTSB-231	ENST00000534382	PAFAH1B2	P68402	229 aa		10.82	□□□□□ -0.68
CTSB-231	ENST00000534382	ENKUR	Q8TC29	256 aa		10.82	□□□□□ -0.68
CTSB-231	ENST00000534382	SMIM8	Q96KF7	97 aa		10.82	□□□□□ -0.68
CTSB-231	ENST00000534382	WWC2-AS2	Q96NR7	200 aa		10.82	□□□□□ -0.68
CTSB-231	ENST00000534382	RCHY1	Q96PM5	261 aa		10.82	□□□□□ -0.68
CTSB-231	ENST00000534382	FAM110A	Q9BQ89	295 aa		10.82	□□□□□ -0.68
CTSB-231	ENST00000534382	UBQLN2	Q9UHD9	624 aa		10.82	□□□□□ -0.68
CTSB-231	ENST00000534382	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.81	□□□□□ -0.68
CTSB-231	ENST00000534382	IGKV1D-37	A0A075B6S9	117 aa		10.81	□□□□□ -0.68
CTSB-231	ENST00000534382	CCS	O14618	274 aa		10.81	□□□□□ -0.68
CTSB-231	ENST00000534382	IL4	P05112	153 aa		10.81	□□□□□ -0.68
CTSB-231	ENST00000534382	IL5	P05113	134 aa		10.81	□□□□□ -0.68
CTSB-231	ENST00000534382	HNRNPC	P07910	306 aa	Known RBP eCLIP	10.81	□□□□□ -0.68	1e-6	■■□□□ 13.5
CTSB-231	ENST00000534382	TFPI2	P48307	235 aa		10.81	□□□□□ -0.68
CTSB-231	ENST00000534382	PAX9	P55771	341 aa		10.81	□□□□□ -0.68
CTSB-231	ENST00000534382	USF2	Q15853	346 aa	Predicted RBP	10.81	□□□□□ -0.68
CTSB-231	ENST00000534382	ODF3L2	Q3SX64	289 aa		10.81	□□□□□ -0.68
CTSB-231	ENST00000534382	GBGT1	Q8N5D6	347 aa		10.81	□□□□□ -0.68
CTSB-231	ENST00000534382	OR51G1	Q8NGK1	321 aa		10.81	□□□□□ -0.68
CTSB-231	ENST00000534382	CITED4	Q96RK1	184 aa		10.81	□□□□□ -0.68

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