RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 ANXA3P12429 323 aa9.86□□□□□ -0.83
CAPN1-228ENST00000534373 CCR6P51684 374 aa9.86□□□□□ -0.83
CAPN1-228ENST00000534373 ATP5IP56385 69 aaPredicted RBP9.86□□□□□ -0.83
CAPN1-228ENST00000534373 YPEL3P61236 119 aaPredicted RBP9.86□□□□□ -0.83
CAPN1-228ENST00000534373 RPL11P62913 178 aaKnown RBP9.86□□□□□ -0.83
CAPN1-228ENST00000534373 SRPXP78539 464 aa9.86□□□□□ -0.83
CAPN1-228ENST00000534373 SLC24A4Q8NFF2 622 aa9.86□□□□□ -0.83
CAPN1-228ENST00000534373 OR1S2Q8NGQ3 325 aa9.86□□□□□ -0.83
CAPN1-228ENST00000534373 DEDD2Q8WXF8 326 aa9.86□□□□□ -0.83
CAPN1-228ENST00000534373 GRAMD2BQ96HH9 432 aa9.86□□□□□ -0.83
CAPN1-228ENST00000534373 U3KQ87 197 aa9.86□□□□□ -0.83
CAPN1-228ENST00000534373 PLECQ15149 4684 aaKnown RBP9.86□□□□□ -0.83
CAPN1-228ENST00000534373 HYDINQ4G0P3 5121 aa9.85□□□□□ -0.83
CAPN1-228ENST00000534373 A0A0B4J2A0 478 aa9.85□□□□□ -0.83
CAPN1-228ENST00000534373 IGLC1P0CG04 106 aa9.85□□□□□ -0.83
CAPN1-228ENST00000534373 FAUP35544 74 aaKnown RBP9.85□□□□□ -0.83
CAPN1-228ENST00000534373 EIF2B2P49770 351 aaKnown RBP9.85□□□□□ -0.83
CAPN1-228ENST00000534373 AP2S1P53680 142 aaPredicted RBP9.85□□□□□ -0.83
CAPN1-228ENST00000534373 AP3S2P59780 193 aa9.85□□□□□ -0.83
CAPN1-228ENST00000534373 PRSS54Q6PEW0 395 aa9.85□□□□□ -0.83
CAPN1-228ENST00000534373 MCUBQ9NWR8 336 aa9.85□□□□□ -0.83
CAPN1-228ENST00000534373 SHPKQ9UHJ6 478 aa9.85□□□□□ -0.83
CAPN1-228ENST00000534373 U3KQE9 123 aa9.85□□□□□ -0.83
CAPN1-228ENST00000534373 IGHV3-66A0A0C4DH42 116 aa9.84□□□□□ -0.83
CAPN1-228ENST00000534373 CXorf65A6NEN9 183 aa9.84□□□□□ -0.83
CAPN1-228ENST00000534373 AKR1C4P17516 323 aa9.84□□□□□ -0.83
CAPN1-228ENST00000534373 NPY1RP25929 384 aa9.84□□□□□ -0.83
CAPN1-228ENST00000534373 P2RY1P47900 373 aa9.84□□□□□ -0.83
CAPN1-228ENST00000534373 DEFB131AP59861 70 aa9.84□□□□□ -0.83
CAPN1-228ENST00000534373 SMCO1Q147U7 214 aa9.84□□□□□ -0.83
CAPN1-228ENST00000534373 ZNF124Q15973 351 aa9.84□□□□□ -0.83
CAPN1-228ENST00000534373 TIGITQ495A1 244 aa9.84□□□□□ -0.83
CAPN1-228ENST00000534373 TMEM41BQ5BJD5 291 aa9.84□□□□□ -0.83
CAPN1-228ENST00000534373 CEMP1Q6PRD7 247 aaPredicted RBP9.84□□□□□ -0.83
CAPN1-228ENST00000534373 LGI3Q8N145 548 aa9.84□□□□□ -0.83
CAPN1-228ENST00000534373 RARRES2Q99969 163 aa9.84□□□□□ -0.83
CAPN1-228ENST00000534373 HSPB7Q9UBY9 170 aa9.84□□□□□ -0.83
CAPN1-228ENST00000534373 DUXBA0A1W2PPF3 345 aa9.83□□□□□ -0.84
CAPN1-228ENST00000534373 HELTA6NFD8 242 aa9.83□□□□□ -0.84
CAPN1-228ENST00000534373 K7EQG2 157 aa9.83□□□□□ -0.84
CAPN1-228ENST00000534373 OR10J1P30954 320 aa9.83□□□□□ -0.84
CAPN1-228ENST00000534373 RND2P52198 227 aa9.83□□□□□ -0.84
CAPN1-228ENST00000534373 SUPT4H1P63272 117 aaKnown RBP9.83□□□□□ -0.84
CAPN1-228ENST00000534373 EWSR1Q01844 656 aaKnown RBP eCLIP9.83□□□□□ -0.84
CAPN1-228ENST00000534373 TMEM128Q5BJH2 165 aa9.83□□□□□ -0.84
CAPN1-228ENST00000534373 TMEM170AQ8WVE7 144 aa9.83□□□□□ -0.84
CAPN1-228ENST00000534373 RABAC1Q9UI14 185 aa9.83□□□□□ -0.84
CAPN1-228ENST00000534373 KLK5Q9Y337 293 aaPredicted RBP9.83□□□□□ -0.84
CAPN1-228ENST00000534373 ZNF701M0R085 212 aaPredicted RBP9.82□□□□□ -0.84
CAPN1-228ENST00000534373 IFNA10P01566 189 aa9.82□□□□□ -0.84
CAPN1-228ENST00000534373 HNRNPCP07910 306 aaKnown RBP eCLIP9.82□□□□□ -0.84
CAPN1-228ENST00000534373 RBMS2Q15434 407 aaKnown RBP9.82□□□□□ -0.84
CAPN1-228ENST00000534373 LYZL2Q7Z4W2 148 aa9.82□□□□□ -0.84
CAPN1-228ENST00000534373 STHQ8IWL8 128 aa9.82□□□□□ -0.84
CAPN1-228ENST00000534373 TOMM5Q8N4H5 51 aa9.82□□□□□ -0.84
CAPN1-228ENST00000534373 STXBP6Q8NFX7 210 aa9.82□□□□□ -0.84
CAPN1-228ENST00000534373 OR11H2Q8NH07 326 aa9.82□□□□□ -0.84
CAPN1-228ENST00000534373 DTD1Q8TEA8 209 aa9.82□□□□□ -0.84
CAPN1-228ENST00000534373 DCANP1Q8TF63 244 aa9.82□□□□□ -0.84
CAPN1-228ENST00000534373 NPIPB3Q92617 1050 aa9.82□□□□□ -0.84
CAPN1-228ENST00000534373 SLC25A21Q9BQT8 299 aaPredicted RBP9.82□□□□□ -0.84
CAPN1-228ENST00000534373 C11orf68Q9H3H3 251 aaKnown RBP9.82□□□□□ -0.84
CAPN1-228ENST00000534373 SEPSECSQ9HD40 501 aaKnown RBP9.82□□□□□ -0.84
CAPN1-228ENST00000534373 TOMM40O96008 361 aa9.81□□□□□ -0.84
CAPN1-228ENST00000534373 CA1P00915 261 aaPredicted RBP9.81□□□□□ -0.84
CAPN1-228ENST00000534373 RD3LP0DJH9 198 aa9.81□□□□□ -0.84
CAPN1-228ENST00000534373 S100A5P33763 92 aa9.81□□□□□ -0.84
CAPN1-228ENST00000534373 GPX4P36969 197 aaPredicted RBP9.81□□□□□ -0.84
CAPN1-228ENST00000534373 PMS2P11Q13670 270 aa9.81□□□□□ -0.84
CAPN1-228ENST00000534373 KLF9Q13886 244 aaPredicted RBP9.81□□□□□ -0.84
CAPN1-228ENST00000534373 PYDC2Q56P42 97 aa9.81□□□□□ -0.84
CAPN1-228ENST00000534373 LEMD1Q68G75 181 aa9.81□□□□□ -0.84
CAPN1-228ENST00000534373 MORN3Q6PF18 240 aaPredicted RBP9.81□□□□□ -0.84
CAPN1-228ENST00000534373 C16orf54Q6UWD8 224 aa9.81□□□□□ -0.84
CAPN1-228ENST00000534373 FAM24BQ8N5W8 94 aa9.81□□□□□ -0.84
CAPN1-228ENST00000534373 LRTM2Q8N967 370 aa9.81□□□□□ -0.84
CAPN1-228ENST00000534373 LINC00476Q8WZB0 136 aa9.81□□□□□ -0.84
CAPN1-228ENST00000534373 MFFQ9GZY8 342 aa9.81□□□□□ -0.84
CAPN1-228ENST00000534373 PFDN2Q9UHV9 154 aa9.81□□□□□ -0.84
CAPN1-228ENST00000534373 SPP1P10451 314 aa9.8□□□□□ -0.84
CAPN1-228ENST00000534373 SLC25A6P12236 298 aa9.8□□□□□ -0.84
CAPN1-228ENST00000534373 TRPT1Q86TN4 253 aaKnown RBP9.8□□□□□ -0.84
CAPN1-228ENST00000534373 GLMPQ8WWB7 406 aa9.8□□□□□ -0.84
CAPN1-228ENST00000534373 TRIM63Q969Q1 353 aa9.8□□□□□ -0.84
CAPN1-228ENST00000534373 ACY3Q96HD9 319 aa9.8□□□□□ -0.84
CAPN1-228ENST00000534373 RBKSQ9H477 322 aa9.8□□□□□ -0.84
CAPN1-228ENST00000534373 PRR13Q9NZ81 148 aa9.8□□□□□ -0.84
CAPN1-228ENST00000534373 EPPK1P58107 5090 aaKnown RBP9.8□□□□□ -0.84
CAPN1-228ENST00000534373 FAM90A26D6RGX4 464 aa9.79□□□□□ -0.84
CAPN1-228ENST00000534373 BUB3O43684 328 aa9.79□□□□□ -0.84
CAPN1-228ENST00000534373 PITX3O75364 302 aa9.79□□□□□ -0.84
CAPN1-228ENST00000534373 NXPH3O95157 252 aa9.79□□□□□ -0.84
CAPN1-228ENST00000534373 IFNA4P05014 189 aa9.79□□□□□ -0.84
CAPN1-228ENST00000534373 IL4P05112 153 aa9.79□□□□□ -0.84
CAPN1-228ENST00000534373 PSG1P11464 419 aa9.79□□□□□ -0.84
CAPN1-228ENST00000534373 NUP62P37198 522 aaPredicted RBP9.79□□□□□ -0.84
CAPN1-228ENST00000534373 USF2Q15853 346 aaPredicted RBP9.79□□□□□ -0.84
CAPN1-228ENST00000534373 OR51G1Q8NGK1 321 aa9.79□□□□□ -0.84
CAPN1-228ENST00000534373 OR1S1Q8NH92 325 aa9.79□□□□□ -0.84
CAPN1-228ENST00000534373 PHLDA1Q8WV24 401 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms