RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 RBMY1BA6NDE4 496 aaKnown RBP11.54□□□□□ -0.56
UBXN1-217ENST00000534176 RBMY1EA6NEQ0 496 aaKnown RBP11.54□□□□□ -0.56
UBXN1-217ENST00000534176 DFFBO76075 338 aa11.54□□□□□ -0.56
UBXN1-217ENST00000534176 RBMY1DP0C7P1 496 aaKnown RBP11.54□□□□□ -0.56
UBXN1-217ENST00000534176 AP2S1P53680 142 aaPredicted RBP11.54□□□□□ -0.56
UBXN1-217ENST00000534176 PRSS54Q6PEW0 395 aa11.54□□□□□ -0.56
UBXN1-217ENST00000534176 ZFAND3Q9H8U3 227 aa11.54□□□□□ -0.56
UBXN1-217ENST00000534176 TP53TG1Q9Y2A0 90 aa11.54□□□□□ -0.56
UBXN1-217ENST00000534176 ZNF207O43670 478 aaKnown RBP11.53□□□□□ -0.56
UBXN1-217ENST00000534176 PITX3O75364 302 aa11.53□□□□□ -0.56
UBXN1-217ENST00000534176 IFNA21P01568 189 aa11.53□□□□□ -0.56
UBXN1-217ENST00000534176 IFNA4P05014 189 aa11.53□□□□□ -0.56
UBXN1-217ENST00000534176 IGLC1P0CG04 106 aa11.53□□□□□ -0.56
UBXN1-217ENST00000534176 LYL1P12980 280 aa11.53□□□□□ -0.56
UBXN1-217ENST00000534176 CRYBB3P26998 211 aa11.53□□□□□ -0.56
UBXN1-217ENST00000534176 OR10J1P30954 320 aa11.53□□□□□ -0.56
UBXN1-217ENST00000534176 PPP1R1AQ13522 171 aa11.53□□□□□ -0.56
UBXN1-217ENST00000534176 FAM90A2PQ658T7 463 aa11.53□□□□□ -0.56
UBXN1-217ENST00000534176 Q6ZWC4 215 aa11.53□□□□□ -0.56
UBXN1-217ENST00000534176 RBKSQ9H477 322 aa11.53□□□□□ -0.56
UBXN1-217ENST00000534176 IGHV3OR16-8A0A075B7F1 116 aa11.52□□□□□ -0.57
UBXN1-217ENST00000534176 HELTA6NFD8 242 aa11.52□□□□□ -0.57
UBXN1-217ENST00000534176 DNASE2O00115 360 aaPredicted RBP11.52□□□□□ -0.57
UBXN1-217ENST00000534176 IGKV1-17P01599 117 aa11.52□□□□□ -0.57
UBXN1-217ENST00000534176 RND2P52198 227 aa11.52□□□□□ -0.57
UBXN1-217ENST00000534176 BAK1Q16611 211 aa11.52□□□□□ -0.57
UBXN1-217ENST00000534176 TCF24Q7RTU0 167 aa11.52□□□□□ -0.57
UBXN1-217ENST00000534176 CCDC32Q9BV29 185 aa11.52□□□□□ -0.57
UBXN1-217ENST00000534176 EDA2RQ9HAV5 297 aa11.52□□□□□ -0.57
UBXN1-217ENST00000534176 CFDP00746 253 aaPredicted RBP11.51□□□□□ -0.57
UBXN1-217ENST00000534176 IL7P13232 177 aa11.51□□□□□ -0.57
UBXN1-217ENST00000534176 S100A7P31151 101 aa11.51□□□□□ -0.57
UBXN1-217ENST00000534176 STPG3Q8N7X2 389 aa11.51□□□□□ -0.57
UBXN1-217ENST00000534176 ZNF414Q96IQ9 312 aa11.51□□□□□ -0.57
UBXN1-217ENST00000534176 SLC35E1Q96K37 410 aa11.51□□□□□ -0.57
UBXN1-217ENST00000534176 WFDC10AQ9H1F0 79 aa11.51□□□□□ -0.57
UBXN1-217ENST00000534176 PRR13Q9NZ81 148 aa11.51□□□□□ -0.57
UBXN1-217ENST00000534176 C9orf170A2RU37 121 aa11.5□□□□□ -0.57
UBXN1-217ENST00000534176 SYNGR2O43760 224 aa11.5□□□□□ -0.57
UBXN1-217ENST00000534176 TOMM40O96008 361 aa11.5□□□□□ -0.57
UBXN1-217ENST00000534176 HNRNPCP07910 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
UBXN1-217ENST00000534176 RD3LP0DJH9 198 aa11.5□□□□□ -0.57
UBXN1-217ENST00000534176 RPL11P62913 178 aaKnown RBP11.5□□□□□ -0.57
UBXN1-217ENST00000534176 ODF3L2Q3SX64 289 aa11.5□□□□□ -0.57
UBXN1-217ENST00000534176 S100ZQ8WXG8 99 aa11.5□□□□□ -0.57
UBXN1-217ENST00000534176 ST8SIA2Q92186 375 aa11.5□□□□□ -0.57
UBXN1-217ENST00000534176 NPIPB3Q92617 1050 aa11.5□□□□□ -0.57
UBXN1-217ENST00000534176 NXPH3O95157 252 aa11.49□□□□□ -0.57
UBXN1-217ENST00000534176 OR4E1P0C645 316 aa11.49□□□□□ -0.57
UBXN1-217ENST00000534176 DHRS2Q13268 280 aa11.49□□□□□ -0.57
UBXN1-217ENST00000534176 MLANAQ16655 118 aa11.49□□□□□ -0.57
UBXN1-217ENST00000534176 TIGITQ495A1 244 aa11.49□□□□□ -0.57
UBXN1-217ENST00000534176 C4orf46Q504U0 113 aa11.49□□□□□ -0.57
UBXN1-217ENST00000534176 CASC10Q5T4H9 136 aa11.49□□□□□ -0.57
UBXN1-217ENST00000534176 OR8G2PQ6IF36 304 aa11.49□□□□□ -0.57
UBXN1-217ENST00000534176 LYG2Q86SG7 212 aa11.49□□□□□ -0.57
UBXN1-217ENST00000534176 WFDC3Q8IUB2 231 aa11.49□□□□□ -0.57
UBXN1-217ENST00000534176 OR51G1Q8NGK1 321 aa11.49□□□□□ -0.57
UBXN1-217ENST00000534176 TMEM170AQ8WVE7 144 aa11.49□□□□□ -0.57
UBXN1-217ENST00000534176 ACY3Q96HD9 319 aa11.49□□□□□ -0.57
UBXN1-217ENST00000534176 MS4A6AQ9H2W1 248 aa11.49□□□□□ -0.57
UBXN1-217ENST00000534176 SEPSECSQ9HD40 501 aaKnown RBP11.49□□□□□ -0.57
UBXN1-217ENST00000534176 WRBO00258 174 aa11.48□□□□□ -0.57
UBXN1-217ENST00000534176 IL4P05112 153 aa11.48□□□□□ -0.57
UBXN1-217ENST00000534176 HOXB5P09067 269 aa11.48□□□□□ -0.57
UBXN1-217ENST00000534176 P2RY1P47900 373 aa11.48□□□□□ -0.57
UBXN1-217ENST00000534176 TMEM41BQ5BJD5 291 aa11.48□□□□□ -0.57
UBXN1-217ENST00000534176 GGNBP1Q5YKI7 109 aa11.48□□□□□ -0.57
UBXN1-217ENST00000534176 SDHCQ99643 169 aaPredicted RBP11.48□□□□□ -0.57
UBXN1-217ENST00000534176 MRPL36Q9P0J6 103 aaKnown RBP11.48□□□□□ -0.57
UBXN1-217ENST00000534176 UBQLN2Q9UHD9 624 aa11.48□□□□□ -0.57
UBXN1-217ENST00000534176 RABAC1Q9UI14 185 aa11.48□□□□□ -0.57
UBXN1-217ENST00000534176 IGHV3-49A0A0A0MS15 119 aa11.47□□□□□ -0.57
UBXN1-217ENST00000534176 ZFP92A6NM28 416 aa11.47□□□□□ -0.57
UBXN1-217ENST00000534176 LYRM1O43325 122 aa11.47□□□□□ -0.57
UBXN1-217ENST00000534176 SAMD13Q5VXD3 122 aa11.47□□□□□ -0.57
UBXN1-217ENST00000534176 TMEM217Q8N7C4 229 aa11.47□□□□□ -0.57
UBXN1-217ENST00000534176 SELENOKQ9Y6D0 94 aa11.47□□□□□ -0.57
UBXN1-217ENST00000534176 U3KQE9 123 aa11.47□□□□□ -0.57
UBXN1-217ENST00000534176 HUWE1Q7Z6Z7 4374 aaKnown RBP11.46□□□□□ -0.57
UBXN1-217ENST00000534176 IGHV3OR16-13A0A075B7E8 117 aa11.46□□□□□ -0.57
UBXN1-217ENST00000534176 IGHV3-74A0A0B4J1X5 117 aa11.46□□□□□ -0.57
UBXN1-217ENST00000534176 SNRPGP15A8MWD9 76 aa11.46□□□□□ -0.57
UBXN1-217ENST00000534176 ATF4P18848 351 aaPredicted RBP11.46□□□□□ -0.57
UBXN1-217ENST00000534176 NKX2-1P43699 371 aaPredicted RBP11.46□□□□□ -0.57
UBXN1-217ENST00000534176 ID3Q02535 119 aa11.46□□□□□ -0.57
UBXN1-217ENST00000534176 GAMTQ14353 236 aa11.46□□□□□ -0.57
UBXN1-217ENST00000534176 GATAD1Q8WUU5 269 aa11.46□□□□□ -0.57
UBXN1-217ENST00000534176 MITD1Q8WV92 249 aa11.46□□□□□ -0.57
UBXN1-217ENST00000534176 RNF125Q96EQ8 232 aa11.46□□□□□ -0.57
UBXN1-217ENST00000534176 TRGV9Q99603 122 aa11.46□□□□□ -0.57
UBXN1-217ENST00000534176 MAP6D1Q9H9H5 199 aa11.46□□□□□ -0.57
UBXN1-217ENST00000534176 FBXL17Q9UF56 701 aa11.46□□□□□ -0.57
UBXN1-217ENST00000534176 STRAPQ9Y3F4 350 aaKnown RBP11.46□□□□□ -0.57
UBXN1-217ENST00000534176 IGKV3-7A0A075B6H7 116 aa11.45□□□□□ -0.58
UBXN1-217ENST00000534176 SPRY2O43597 315 aa11.45□□□□□ -0.58
UBXN1-217ENST00000534176 APOHP02749 345 aaPredicted RBP11.45□□□□□ -0.58
UBXN1-217ENST00000534176 PSG1P11464 419 aa11.45□□□□□ -0.58
UBXN1-217ENST00000534176 BTCP35070 178 aa11.45□□□□□ -0.58
UBXN1-217ENST00000534176 TFPI2P48307 235 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms