RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 RHOGP84095 191 aa15.72■□□□□ 0.11
CAPN1-226ENST00000533820 FAM27E3Q08E93 113 aa15.72■□□□□ 0.11
CAPN1-226ENST00000533820 IBA57Q5T440 356 aaKnown RBP15.72■□□□□ 0.11
CAPN1-226ENST00000533820 PRNDQ9UKY0 176 aa15.72■□□□□ 0.11
CAPN1-226ENST00000533820 LHBP01229 141 aa15.71■□□□□ 0.11
CAPN1-226ENST00000533820 UBE2L3P68036 154 aaKnown RBP15.71■□□□□ 0.11
CAPN1-226ENST00000533820 LCN12Q6JVE5 192 aa15.71■□□□□ 0.11
CAPN1-226ENST00000533820 TMEM167BQ9NRX6 74 aa15.71■□□□□ 0.11
CAPN1-226ENST00000533820 DYSFO75923 2080 aa15.71■□□□□ 0.11
CAPN1-226ENST00000533820 ANKRD11Q6UB99 2663 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-226ENST00000533820 IGHV1-69-2A0A0G2JMI3 117 aa15.71■□□□□ 0.11
CAPN1-226ENST00000533820 PRCDQ00LT1 54 aa15.71■□□□□ 0.11
CAPN1-226ENST00000533820 MRPL20Q9BYC9 149 aaKnown RBP15.71■□□□□ 0.11
CAPN1-226ENST00000533820 RAI1Q7Z5J4 1906 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-226ENST00000533820 IGLC7A0M8Q6 106 aa15.71■□□□□ 0.1
CAPN1-226ENST00000533820 RTL8BQ17RB0 113 aa15.71■□□□□ 0.1
CAPN1-226ENST00000533820 GAFA1Q96PS6 74 aa15.71■□□□□ 0.1
CAPN1-226ENST00000533820 AKAP13Q12802 2813 aa15.7■□□□□ 0.1
CAPN1-226ENST00000533820 A6NJY4 79 aa15.7■□□□□ 0.1
CAPN1-226ENST00000533820 DIAPH2-AS1Q14236 149 aa15.7■□□□□ 0.1
CAPN1-226ENST00000533820 HARBI1Q96MB7 349 aa15.7■□□□□ 0.1
CAPN1-226ENST00000533820 IGHV1-46P01743 117 aa15.7■□□□□ 0.1
CAPN1-226ENST00000533820 REG1AP05451 166 aa15.7■□□□□ 0.1
CAPN1-226ENST00000533820 GLRXP35754 106 aa15.7■□□□□ 0.1
CAPN1-226ENST00000533820 SCGB2A2Q13296 93 aa15.7■□□□□ 0.1
CAPN1-226ENST00000533820 COMMD5Q9GZQ3 224 aa15.7■□□□□ 0.1
CAPN1-226ENST00000533820 NRN1Q9NPD7 142 aa15.7■□□□□ 0.1
CAPN1-226ENST00000533820 ZNF355PQ9NSJ1 428 aa15.7■□□□□ 0.1
CAPN1-226ENST00000533820 ZFHX2Q9C0A1 2572 aaPredicted RBP15.7■□□□□ 0.1
CAPN1-226ENST00000533820 CX3CL1P78423 397 aa15.69■□□□□ 0.1
CAPN1-226ENST00000533820 PRB3Q04118 309 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-226ENST00000533820 TMEM136Q6ZRR5 245 aa15.69■□□□□ 0.1
CAPN1-226ENST00000533820 ZNF439Q8NDP4 499 aa15.69■□□□□ 0.1
CAPN1-226ENST00000533820 GPX1P07203 203 aa15.69■□□□□ 0.1
CAPN1-226ENST00000533820 CFHR2P36980 270 aa15.69■□□□□ 0.1
CAPN1-226ENST00000533820 MPV17L2Q567V2 206 aa15.69■□□□□ 0.1
CAPN1-226ENST00000533820 ZNF318Q5VUA4 2279 aa15.69■□□□□ 0.1
CAPN1-226ENST00000533820 TAX1BP3O14907 124 aa15.69■□□□□ 0.1
CAPN1-226ENST00000533820 RNASE2P10153 161 aaKnown RBP15.69■□□□□ 0.1
CAPN1-226ENST00000533820 PRB4P10163 310 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-226ENST00000533820 KLHDC1Q8N7A1 406 aa15.69■□□□□ 0.1
CAPN1-226ENST00000533820 WASHC3Q9Y3C0 194 aa15.69■□□□□ 0.1
CAPN1-226ENST00000533820 IGLV2-8P01709 118 aa15.68■□□□□ 0.1
CAPN1-226ENST00000533820 APOBEC3AP31941 199 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-226ENST00000533820 RBPJQ06330 500 aa15.68■□□□□ 0.1
CAPN1-226ENST00000533820 SLC25A33Q9BSK2 321 aa15.68■□□□□ 0.1
CAPN1-226ENST00000533820 SFXN3Q9BWM7 321 aa15.68■□□□□ 0.1
CAPN1-226ENST00000533820 GNB1LQ9BYB4 327 aa15.68■□□□□ 0.1
CAPN1-226ENST00000533820 PTPRZ1P23471 2315 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-226ENST00000533820 TOX4O94842 621 aa15.68■□□□□ 0.1
CAPN1-226ENST00000533820 C8orf88P0DMB2 117 aa15.68■□□□□ 0.1
CAPN1-226ENST00000533820 STUMQ69YW2 141 aa15.68■□□□□ 0.1
CAPN1-226ENST00000533820 STXBP6Q8NFX7 210 aa15.68■□□□□ 0.1
CAPN1-226ENST00000533820 H1FXQ92522 213 aaKnown RBP15.68■□□□□ 0.1
CAPN1-226ENST00000533820 MRPS16Q9Y3D3 137 aaKnown RBP15.68■□□□□ 0.1
CAPN1-226ENST00000533820 IGHV3-21A0A0B4J1V1 117 aa15.67■□□□□ 0.1
CAPN1-226ENST00000533820 BMPR1BO00238 502 aa15.67■□□□□ 0.1
CAPN1-226ENST00000533820 TAS2R45P59539 299 aa15.67■□□□□ 0.1
CAPN1-226ENST00000533820 ADTRPQ96IZ2 230 aa15.67■□□□□ 0.1
CAPN1-226ENST00000533820 SLC25A10Q9UBX3 287 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-226ENST00000533820 NBASA2RRP1 2371 aa15.67■□□□□ 0.1
CAPN1-226ENST00000533820 A0A1W2PS18 150 aa15.67■□□□□ 0.1
CAPN1-226ENST00000533820 H3BTX0 84 aa15.67■□□□□ 0.1
CAPN1-226ENST00000533820 GPR6P46095 362 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-226ENST00000533820 SELENOVP59797 346 aa15.67■□□□□ 0.1
CAPN1-226ENST00000533820 GNG5P63218 68 aa15.67■□□□□ 0.1
CAPN1-226ENST00000533820 NPIPB3Q92617 1050 aa15.67■□□□□ 0.1
CAPN1-226ENST00000533820 SSBP4Q9BWG4 385 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-226ENST00000533820 RPUSD1Q9UJJ7 312 aaKnown RBP15.67■□□□□ 0.1
CAPN1-226ENST00000533820 CDC42EP3Q9UKI2 254 aa15.67■□□□□ 0.1
CAPN1-226ENST00000533820 APC2O95996 2303 aa15.67■□□□□ 0.1
CAPN1-226ENST00000533820 IGHV2-26A0A0B4J1V2 119 aa15.66■□□□□ 0.1
CAPN1-226ENST00000533820 DPRXA6NFQ7 191 aa15.66■□□□□ 0.1
CAPN1-226ENST00000533820 USF1P22415 310 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-226ENST00000533820 SMAGPQ0VAQ4 97 aa15.66■□□□□ 0.1
CAPN1-226ENST00000533820 SLAQ13239 276 aa15.66■□□□□ 0.1
CAPN1-226ENST00000533820 CAMPP49913 170 aa15.66■□□□□ 0.1
CAPN1-226ENST00000533820 PSG9Q00887 426 aa15.66■□□□□ 0.1
CAPN1-226ENST00000533820 PAX2Q02962 417 aa15.66■□□□□ 0.1
CAPN1-226ENST00000533820 CD69Q07108 199 aa15.66■□□□□ 0.1
CAPN1-226ENST00000533820 Q0VG73 95 aa15.66■□□□□ 0.1
CAPN1-226ENST00000533820 C19orf35Q6ZS72 473 aa15.66■□□□□ 0.1
CAPN1-226ENST00000533820 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-226ENST00000533820 BLNKQ8WV28 456 aa15.66■□□□□ 0.1
CAPN1-226ENST00000533820 IGHV3-72A0A0B4J1Y9 119 aa15.66■□□□□ 0.1
CAPN1-226ENST00000533820 MFAP2P55001 183 aa15.66■□□□□ 0.1
CAPN1-226ENST00000533820 TIMM23BQ5SRD1 257 aa15.66■□□□□ 0.1
CAPN1-226ENST00000533820 SLC25A48Q6ZT89 311 aaKnown RBP15.66■□□□□ 0.1
CAPN1-226ENST00000533820 GTSF1LQ9H1H1 148 aa15.66■□□□□ 0.1
CAPN1-226ENST00000533820 FAM215AQ9Y5M1 114 aa15.66■□□□□ 0.1
CAPN1-226ENST00000533820 TRAV9-1A0A075B6T8 112 aa15.65■□□□□ 0.1
CAPN1-226ENST00000533820 COX7A2P2O60397 106 aa15.65■□□□□ 0.1
CAPN1-226ENST00000533820 SLC25A2Q9BXI2 301 aa15.65■□□□□ 0.1
CAPN1-226ENST00000533820 OSTCQ9NRP0 149 aa15.65■□□□□ 0.1
CAPN1-226ENST00000533820 FTH1P19P0C7X4 201 aa15.65■□□□□ 0.1
CAPN1-226ENST00000533820 C3orf79P0CE67 100 aa15.65■□□□□ 0.1
CAPN1-226ENST00000533820 CEACAM3P40198 252 aa15.65■□□□□ 0.1
CAPN1-226ENST00000533820 DLX1P56177 255 aa15.65■□□□□ 0.1
CAPN1-226ENST00000533820 MRPL36Q9P0J6 103 aaKnown RBP15.65■□□□□ 0.1
CAPN1-226ENST00000533820 AMMECR1Q9Y4X0 333 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms