RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 TAS2R60P59551 318 aa6.96□□□□□ -1.3
CSDE1-215ENST00000533818 CATR1Q13166 79 aa6.96□□□□□ -1.3
CSDE1-215ENST00000533818 TIGITQ495A1 244 aa6.96□□□□□ -1.3
CSDE1-215ENST00000533818 LYPD5Q6UWN5 251 aa6.96□□□□□ -1.3
CSDE1-215ENST00000533818 AMIGO2Q86SJ2 522 aa6.96□□□□□ -1.3
CSDE1-215ENST00000533818 BAP18Q8IXM2 172 aa6.96□□□□□ -1.3
CSDE1-215ENST00000533818 LINC00612Q8N6U2 182 aa6.96□□□□□ -1.3
CSDE1-215ENST00000533818 LGALS14Q8TCE9 139 aa6.96□□□□□ -1.3
CSDE1-215ENST00000533818 KLK11Q9UBX7 282 aa6.96□□□□□ -1.3
CSDE1-215ENST00000533818 TRAV5A0A0B4J249 113 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 ZNF98A6NK75 572 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 A8MTW9 85 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 BUB3O43684 328 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 KRASP01116 189 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 IGKV1-17P01599 117 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 UCP1P25874 307 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 ERHP84090 104 aaKnown RBP6.95□□□□□ -1.3
CSDE1-215ENST00000533818 PRCDQ00LT1 54 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 INSL4Q14641 139 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 RAB11BQ15907 218 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 ZNF493Q6ZR52 646 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 GPR141Q7Z602 305 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 C10orf126Q8N4M7 172 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 OR51H1Q8NH63 302 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 Q8WTZ3 238 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 SECTM1Q8WVN6 248 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 PHYHIPQ92561 330 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 TMPRSS5Q9H3S3 457 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 PLGRKTQ9HBL7 147 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 MRPL36Q9P0J6 103 aaKnown RBP6.95□□□□□ -1.3
CSDE1-215ENST00000533818 OAZ3Q9UMX2 235 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 ICOSQ9Y6W8 199 aa6.95□□□□□ -1.3
CSDE1-215ENST00000533818 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-215ENST00000533818 TRAV12-2A0A075B6T6 113 aa6.94□□□□□ -1.3
CSDE1-215ENST00000533818 RLN2P04090 185 aa6.94□□□□□ -1.3
CSDE1-215ENST00000533818 ETV6P41212 452 aa6.94□□□□□ -1.3
CSDE1-215ENST00000533818 CD300CQ08708 224 aa6.94□□□□□ -1.3
CSDE1-215ENST00000533818 MSMO1Q15800 293 aa6.94□□□□□ -1.3
CSDE1-215ENST00000533818 WFDC10BQ8IUB3 73 aa6.94□□□□□ -1.3
CSDE1-215ENST00000533818 TMEM256Q8N2U0 113 aa6.94□□□□□ -1.3
CSDE1-215ENST00000533818 ZBTB34Q8NCN2 500 aa6.94□□□□□ -1.3
CSDE1-215ENST00000533818 BPIFB6Q8NFQ5 453 aa6.94□□□□□ -1.3
CSDE1-215ENST00000533818 OR11H7Q8NGC8 314 aa6.94□□□□□ -1.3
CSDE1-215ENST00000533818 RHOXF1Q8NHV9 184 aa6.94□□□□□ -1.3
CSDE1-215ENST00000533818 TMEM203Q969S6 136 aa6.94□□□□□ -1.3
CSDE1-215ENST00000533818 RPRMQ9NS64 109 aa6.94□□□□□ -1.3
CSDE1-215ENST00000533818 LPAP08519 4548 aa6.93□□□□□ -1.3
CSDE1-215ENST00000533818 ERICH4A6NGS2 130 aa6.93□□□□□ -1.3
CSDE1-215ENST00000533818 GSTZ1O43708 216 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-215ENST00000533818 HIST1H1DP16402 221 aaKnown RBP6.93□□□□□ -1.3
CSDE1-215ENST00000533818 MYL12AP19105 171 aa6.93□□□□□ -1.3
CSDE1-215ENST00000533818 G6PCP35575 357 aa6.93□□□□□ -1.3
CSDE1-215ENST00000533818 TBCEQ15813 527 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-215ENST00000533818 ZIK1Q3SY52 487 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-215ENST00000533818 SFXN4Q6P4A7 337 aa6.93□□□□□ -1.3
CSDE1-215ENST00000533818 OR10R2Q8NGX6 335 aa6.93□□□□□ -1.3
CSDE1-215ENST00000533818 OR4X1Q8NH49 305 aa6.93□□□□□ -1.3
CSDE1-215ENST00000533818 RNASE8Q8TDE3 154 aaKnown RBP6.93□□□□□ -1.3
CSDE1-215ENST00000533818 TMEM263Q8WUH6 116 aaKnown RBP6.93□□□□□ -1.3
CSDE1-215ENST00000533818 FAM107BQ9H098 131 aa6.93□□□□□ -1.3
CSDE1-215ENST00000533818 CACNG5Q9UF02 275 aa6.93□□□□□ -1.3
CSDE1-215ENST00000533818 TRAV30A0A087WSZ9 112 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 A0A0B4J293 547 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 SLC17A2O00624 439 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 ISLRO14498 428 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 SOCS3O14543 225 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 FCER2P06734 321 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 DTYMKP23919 212 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 GADD45AP24522 165 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 CALRP27797 417 aaKnown RBP6.92□□□□□ -1.3
CSDE1-215ENST00000533818 SNCAP37840 140 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 CLDN12P56749 244 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 DHODHQ02127 395 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 WFDC2Q14508 124 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 MLANAQ16655 118 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 C2orf76Q3KRA6 126 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 AADACL3Q5VUY0 350 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 CNIH2Q6PI25 160 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 GPR146Q96CH1 333 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 PAXXQ9BUH6 204 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 Q9HAA7 133 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 RCL1Q9Y2P8 373 aaKnown RBP6.92□□□□□ -1.3
CSDE1-215ENST00000533818 ORC6Q9Y5N6 252 aa6.92□□□□□ -1.3
CSDE1-215ENST00000533818 PAX4O43316 350 aa6.91□□□□□ -1.3
CSDE1-215ENST00000533818 IL4P05112 153 aa6.91□□□□□ -1.3
CSDE1-215ENST00000533818 LPAR6P43657 344 aa6.91□□□□□ -1.3
CSDE1-215ENST00000533818 CNN1P51911 297 aaKnown RBP6.91□□□□□ -1.3
CSDE1-215ENST00000533818 ZNF485Q8NCK3 441 aa6.91□□□□□ -1.3
CSDE1-215ENST00000533818 FAM3DQ96BQ1 224 aa6.91□□□□□ -1.3
CSDE1-215ENST00000533818 TSC22D3Q99576 134 aa6.91□□□□□ -1.3
CSDE1-215ENST00000533818 SLC5A7Q9GZV3 580 aa6.91□□□□□ -1.3
CSDE1-215ENST00000533818 ELF5Q9UKW6 265 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-215ENST00000533818 RAB22AQ9UL26 194 aa6.91□□□□□ -1.3
CSDE1-215ENST00000533818 RBFOX3A6NFN3 312 aa6.9□□□□□ -1.3
CSDE1-215ENST00000533818 DUSP14O95147 198 aaKnown RBP6.9□□□□□ -1.3
CSDE1-215ENST00000533818 CD1AP06126 327 aa6.9□□□□□ -1.3
CSDE1-215ENST00000533818 OPRK1P41145 380 aa6.9□□□□□ -1.3
CSDE1-215ENST00000533818 ARPC4P59998 168 aa6.9□□□□□ -1.3
CSDE1-215ENST00000533818 TDRG1Q3Y452 100 aa6.9□□□□□ -1.3
CSDE1-215ENST00000533818 HSD17B12Q53GQ0 312 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms